mRNA_P-fluviatile_contig77.14167.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig77.14167.1
Unique NamemRNA_P-fluviatile_contig77.14167.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: D7FHY7_ECTSI (General transcription factor IIH subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY7_ECTSI)

HSP 1 Score: 826 bits (2133), Expect = 5.700e-294
Identity = 438/523 (83.75%), Postives = 474/523 (90.63%), Query Frame = 2 
Query:   77 VMLSSSAMSLNVFEYLEKLPPDALDNLYGKQQASAAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFVEGSVEKSMLKSWVKKEYQRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPWQGDVPLTADRSPPSVAKIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGGALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPA--SGGGDGGVGQRQPQPAGAPLGGNKGEDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQEGVLMDVSYASREAFRGIIDFANTMQGLLWSSPLGGEXXXXXXXXXXXXXXXX------RKKLVVIAPAIVDSLNAAIVQNSWTSAF 1621
            ++ S++ MSLNVF+YLE+LPPDALD LYG    +A GQ  RSHGQWTCRALLQSLPQLAKQ+VMRLLFVEG V K MLKSWVKKEYQRVHAAS+RKLVSLRVLL +  GQEY+LNP FRENLQR+LCA DKTPWQGDVPL+ADRSPP+VAKIER MHSQWQDVLYFLVGSDEEGRS PPARV+KFMEESGLMRPVRG GALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRD+LLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFV+LGLLFKRKAKSTRFYPTSIAVNLIFGS+P+  +GG      QR+PQPA       + +DTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKAL+TGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEH++GVL+DVSYASR+AFRG+ +FAN  QGLLWSSPLGGE XXXXXXXXXXXXXXX      RKKL+V++P IV+SLNAAIV+N WTS+F
Sbjct:   12 LLASATTMSLNVFDYLERLPPDALDKLYGAAPPAADGQGGRSHGQWTCRALLQSLPQLAKQHVMRLLFVEGPVGKGMLKSWVKKEYQRVHAASVRKLVSLRVLLPSAGGQEYQLNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSTPPARVVKFMEESGLMRPVRGRGALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDELLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVELGLLFKRKAKSTRFYPTSIAVNLIFGSSPSGDAGGAXXXXTQRKPQPAXXXXXXKREDDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALSTGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHRDGVLVDVSYASRDAFRGMTEFANAKQGLLWSSPLGGEDXXXXXXXXXXXXXXXXXXLAGRKKLMVVSPGIVESLNAAIVENGWTSSF 534
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BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: A0A6H5KJZ4_9PHAE (General transcription factor IIH subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJZ4_9PHAE)

HSP 1 Score: 535 bits (1378), Expect = 1.190e-181
Identity = 278/372 (74.73%), Postives = 299/372 (80.38%), Query Frame = 2 
Query:   77 VMLSSSAMSLNVFEYLEKLPPDALDNLYGKQQASAAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFVEGSVEKSMLKSWVKKEYQRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPWQGDVPLTADRSPPSVAKIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGGALRITDKG------------------------------------------------YEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPA--SGGGDGGVGQRQPQPAG 1042
            ++ S++ MSLNVF+YLE+LPPDALD LYG    +A GQ  RSHGQWTCRALLQSLPQLAKQ+VMRLLFVEG V K MLKSWVKKEYQRVHAAS+RKLVSLRVLL + DGQEY+LNP FRENLQR+LCA DKTPWQGDVPL+ADRSPP+VAKIER MHSQWQDVLYFLVGSDEEGRS PPARV+KFMEESGLMRPVRGGGALRITDKG                                                YEFMLKEAHVQAWMVVHALINGYGRTQPGCRD+LLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFV+LGLLFKRKAKSTRFYPTSIAVNLIFGS+P+  +GG  GG  QR+PQPAG
Sbjct:   12 LLASTTTMSLNVFDYLERLPPDALDKLYGAAPPAAQGQGGRSHGQWTCRALLQSLPQLAKQHVMRLLFVEGPVGKGMLKSWVKKEYQRVHAASVRKLVSLRVLLPSADGQEYQLNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSTPPARVVKFMEESGLMRPVRGGGALRITDKGQEEAWNCSRGARGGSFLCLRGGVGRGGARVLSTSSMLEGAVYPRRTGLYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDELLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVELGLLFKRKAKSTRFYPTSIAVNLIFGSSPSGDAGGAGGGGAQRKPQPAG 383
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BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: A0A836C856_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C856_9STRA)

HSP 1 Score: 328 bits (842), Expect = 2.280e-100
Identity = 199/461 (43.17%), Postives = 265/461 (57.48%), Query Frame = 2 
Query:  284 EGSVEKSMLKSWVKKEYQRVHAASIRKLVSLRVLLTTKD-------GQEYR-----LNPHFRENLQRSLCAPDKTPWQGD--VPLTADRSPPSVAKIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGGALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYC------------------------------------------KVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPASGGGDGGVGQRQPQPAGAPLGGNKGEDTSIH--------IIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQEGVLMDVSYASREAFRGIIDFANTMQGLLWSS 1474
            +G++ K +LK WV+  Y  VH A++R+L +LRVL+  ++        Q+ R     LNP FR+NL ++L  PD  PW+ D    L  D+  PS AKIE  M  +W+ VL+FLV SD  G    P+ V  FM+++GLM        L IT++GYEFML++ HVQAWM V +LI     +    RDDLL+FLF LSYC                                          KV + YPL ALT  Q  LA+DF+DLGLL++RK  S RFY T IAVNL+FG+A A              P+ A +   +  D S          IIVETNFQV+AYT S LH AML+LFLELRA LPN ++G ITRES+R+AL TGIK  Q+L+FLKWHAHP V  R P++PENIADQ++LWERER R+++  G L+D+ +     F  + ++A  +   LW++
Sbjct:   22 DGAISKDLLKGWVRDAYTGVHRAAVRQLSALRVLVRAQELSGAAAAAQQQRRGMIALNPPFRKNLLQALLTPDVAPWKDDPRFALRPDKLTPSRAKIEGEMRRKWEAVLHFLVASDGAGAGPTPS-VRAFMQQAGLMARRGRSEQLVITNRGYEFMLRDIHVQAWMFVLSLIRSKS-SDAQARDDLLSFLFMLSYCTVSAALQPLEGHHNAQSVCAAPSLSCKPLPAAPSASVNRCSEKVCEDYPLLALTPAQAQLARDFIDLGLLYQRKPSSQRFYTTEIAVNLVFGAAAAE------------HPSRAVI---QAADASAQLDLAPRMTIIVETNFQVVAYTTSDLHVAMLTLFLELRARLPNMVIGVITRESVRQALVTGIKASQILNFLKWHAHPNVINRRPMIPENIADQIILWERERTRVKYDAGTLLDLPFEGVHDFDKVAEYAEELGACLWAA 465
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BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: A0A024TBA0_9STRA (General transcription factor IIH subunit 4 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TBA0_9STRA)

HSP 1 Score: 315 bits (806), Expect = 2.520e-95
Identity = 195/476 (40.97%), Postives = 276/476 (57.98%), Query Frame = 2 
Query:  104 LNVFEYLEKLPPDALDNLYGKQQASAAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFVE-GSVEKSMLKSWVKKEYQRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPWQ-GDVPLTADRSPPSVAKIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPASGGGDGGVGQRQ------------------PQPAGAPLGGNKGEDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQEGVLMDVSYASREAFRGIIDFANTMQGLLW 1468
            +N FE+L  LP  ++D LY  Q A            W C+A+ QSL  LA+Q VMRLLF    +     +  WV+   Q    A+I KL  LRVL   +   +Y LNP F+E L+++L +   +PW+ G   L A++  P+V ++E +   +W  VL+F+VGS     + PPA V+  +E + LM+P +    AL ITD GYEFMLK+ H Q W+ V   +    R      D++L FLFQ+SYC++ + Y +  LT+ Q+ L  D V+LGLL++R AK+TRFY TS+AVNLIFG         G +GQ +                  P  +  P       D+S+ I+VETNF+V AYT+S LH AMLS+F+++ A LPN  VG +TRES+R AL+ GI   Q+ DFL  HAHP +   +PV+PENIADQ+ LW+RER+R++ + G L+DV+    E F  ++  A  M  LLW
Sbjct:    1 MNAFEFLGSLPGGSVDRLY--QDA------------WACQAVFQSLSPLAQQIVMRLLFSNHATYAHDAILHWVQDAAQDKMTAAIEKLRHLRVLRVVQGSLDYVLNPVFQEQLKKALSSLGGSPWEAGRSKLPAEKPIPAV-ELELYARKRWDSVLHFMVGSTAV--AAPPATVIGILEHTKLMQPSKSDSRALHITDTGYEFMLKDIHAQTWIFVLEYMKDIDRKGILPADEMLQFLFQMSYCRMNEYYAVADLTRNQQQLLGDLVELGLLYRRGAKATRFYTTSLAVNLIFG---------GMLGQTRANMTMSQGLDHITNYAADPSKSRLPSASPARADSSLLIVVETNFKVYAYTQSSLHIAMLSVFVDIVARLPNLAVGFLTRESIRSALSNGISAEQIYDFLMQHAHPKMLGNSPVIPENIADQLYLWQRERNRIKFEPGELVDVA---NEDFDAVVKHAEDMGVLLW 447
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BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: W4FDT1_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FDT1_9STRA)

HSP 1 Score: 312 bits (799), Expect = 2.600e-94
Identity = 190/478 (39.75%), Postives = 271/478 (56.69%), Query Frame = 2 
Query:  104 LNVFEYLEKLPPDALDNLYGKQQASAAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFV-EGSVEKSMLKSWVKKEYQRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPWQGDVPLTADRSPPSVAKIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPASGGGDGGVGQRQ---------------------PQPAGAPLGGNKGEDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQEGVLMDVSYASREAFRGIIDFANTMQGLLW 1468
            +N FE+L  LP  ++D LY  Q A            W C+A+ QS+  LA+Q VMRLLF  +GS     +  WV+   Q    A+I KL  LRVL       EY LNP F++ L+++L +   +PW+          P + A++E++   +W  VL+F+VGS     + PP  V+  +E +GLM+P +    AL ITD GYEFMLK+ H Q W+ V   +    R      +++L FLFQ+SYC++ + Y +  LT+ Q+ L  D V+LGLL++R AK+TRFY TS+AVNLIFG         G +GQ +                     P P  A        D  + I+VETNF+V AYT+S LH AMLS+F+++ A LPN  VG +TRES+R AL+ GI   Q+ DFL  HAHP +   +PV+PENIADQ+ LW+RER+R++   G L+D  + + E F  ++ FA  +  +LW
Sbjct:    1 MNAFEFLGSLPGGSVDRLY--QDA------------WACQAVFQSMSPLAQQIVMRLLFTNQGSYSHDAILQWVQDPAQVKMTAAIEKLRHLRVLRMAHGTAEYVLNPVFQDQLKKALSSLGGSPWEAGRHKLPSEKPIAAAELEQYARKRWDAVLHFMVGSTAV--AAPPPTVIGILEHTGLMQPSKTDARALHITDTGYEFMLKDIHAQTWIFVLEYMKDIDRKGILSAEEMLQFLFQMSYCRMNEYYAVADLTRHQQQLLGDLVELGLLYRRGAKATRFYTTSLAVNLIFG---------GMLGQTRSSITMSQGLDHLHRPSKSPHLPPPTAAAA------DAHLLIVVETNFKVYAYTQSSLHIAMLSVFVDIVARLPNLAVGFLTRESIRSALSNGISAEQIYDFLMQHAHPKMLGNSPVIPENIADQLYLWQRERNRIKFDAGELVD-GFVTTEDFDVVLKFAQDVGVMLW 446
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BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: A0A0P1AW06_PLAHL (General transcription factor IIH subunit 4 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AW06_PLAHL)

HSP 1 Score: 310 bits (794), Expect = 2.250e-93
Identity = 189/479 (39.46%), Postives = 271/479 (56.58%), Query Frame = 2 
Query:  104 LNVFEYLEKLPPDALDNLYGKQQASAAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFVEGSVEKSMLKSWV------KKEYQRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPWQ-GDVPLTADRSPPSVAK-IERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPAS-----------GGGDGGVGQRQPQPAGAPLGGNKGEDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQEGVLMDVSYASREAFRGIIDFANTMQGLLWSSPL 1480
            ++ FE+LE LP   L+ LY                 W C+A+ Q+LP LA+Q+VMRLL    SV + +L+ WV        E      A++ KL  LRV +    G  YR +P F++ L  +L     +PW+ G + L  D      AK +ER+  ++W  VL+++VGS       PP  V+  +  + L++       AL ITD GYEFMLK+ HVQ W  +   I     T    ++D+L FLFQLSYC+ G  Y +  LTQTQ+ L  DF+D GLLF++++ S RFY TS+AVNLIFG +               G   GV  +   P   P+      +  + ++VETNF++ AYT S LH AMLS+F+++ A LPN  +G ITRES+R AL  GI  +Q+ DFL  HAHP +R+ TP+VPENIADQ+ LWERER+R++  EG+L D  + ++E +  + D+A  +  L W+ P+
Sbjct:    1 MDAFEFLETLPAATLERLY--------------QDPWACQAVFQALPPLAQQFVMRLLPTNTSVPRDLLEKWVVPLPGDSHEMPPQFNAALHKLDGLRVFIQENGG--YRPHPLFQKQLMYALSNLGGSPWERGRLRLPKDPENTFAAKDLERYARARWDSVLHYMVGSTAVQE--PPQSVVDILLRTKLLQSSEADSRALHITDTGYEFMLKDIHVQMWTFMLEYIRTLDNTGTLKQEDILQFLFQLSYCQTGGYYAVADLTQTQQLLLGDFIDFGLLFRKRSNSDRFYTTSLAVNLIFGGSKGQERSHVRLTSSFAGVRAGVKSQVTNPRLTPV---LDHEAQLLVVVETNFKIYAYTSSTLHVAMLSVFVDIVARLPNLAIGFITRESLRSALIHGISAQQIYDFLVKHAHPKMRQNTPIVPENIADQIYLWERERNRVQFIEGILFD-GFNTKEDYESVCDYARNLDVLTWADPI 457
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BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: A0A6G0WGX7_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGX7_9STRA)

HSP 1 Score: 307 bits (786), Expect = 2.090e-92
Identity = 185/472 (39.19%), Postives = 261/472 (55.30%), Query Frame = 2 
Query:  104 LNVFEYLEKLPPDALDNLYGKQQASAAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFVEGSVEKSMLKSWVKKEYQRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPWQGDVPLTADRSPPSVAKIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPASGGGDGGVGQRQP------------QPAGAPLGGNKGEDTS----IHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQEGVLMDVSYASREAFRGIIDFANTMQGLLW 1468
            +N FEYL  LP  +LD LY                 W C+A+ QS+  L++Q VMRLLF    V K  L  W++   Q    A+I KL  LRVL   +   ++ LNP F+E L+ +L +   +PW+          P + A +E++   +W  VL+F+VGS       PP  V+  +E + LM+P      AL ITD GYEFMLK+ H Q W+ V   I    R      D++L F FQ+SYC++ + Y +  LT+ Q+ L  D V LGLL+++ +K+TRFY TS+AVNLIFG         G  GQ +             Q A + +       TS    + I+VETNF+V AYT S LH AMLS+F+++ A LPN  VG +TRES+R AL  GI   Q+ DFL  HAHP +   +PV+PENIADQ+ LW+RER+R++   G L+D  + + E F  ++ +A  +  L+W
Sbjct:    1 MNAFEYLGALPGTSLDRLY--------------QDPWACQAVFQSMNPLSQQIVMRLLFTTTHVSKDALMHWIQDSAQSKMTAAIEKLCHLRVLRPVQGTNKFGLNPAFQEKLKTALSSLGGSPWEAGRKNLPPEKPIAAADLEQYARKRWDAVLHFMVGSTAV--PAPPKEVIGILEHTRLMKPSETDARALHITDTGYEFMLKDIHAQTWIFVLNYIKDIDRKGILSADEMLQFFFQMSYCRMNEYYAVADLTRHQQQLLGDLVQLGLLYRKDSKATRFYTTSLAVNLIFG---------GMAGQTRTNITMVQSLEAVHQQASSQVVPRPFASTSSASHLLIVVETNFKVYAYTESTLHIAMLSVFVDIVARLPNLAVGYLTRESIRSALIHGISAEQIYDFLMQHAHPKMLANSPVIPENIADQLYLWQRERNRIKFDAGELLD-GFVTTEDFDSVVKYAQDLHVLMW 446
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BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: A0A6G0N8J6_9STRA (General transcription factor IIH subunit 4 n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0N8J6_9STRA)

HSP 1 Score: 315 bits (807), Expect = 2.270e-92
Identity = 191/483 (39.54%), Postives = 283/483 (58.59%), Query Frame = 2 
Query:   95 AMSLNVFEYLEKLPPDALDNLYGKQQASAAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFVEGSVEKSMLKSWVKKEY-------QRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPWQ-GDVPLTAD-RSPPSVAKIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPAS-----------GGGDGGVGQRQPQPAGAPLGGNKGEDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQEGVLMDVSYASREAFRGIIDFANTMQGLLWSSPL 1480
            +++++ F++LE LPP  L+ LY                 W C+A+ Q+LP LA+Q+VMRLL     V +S+L+ WV  E         + HAA + KL  L+V +  +DG  YR +P F++ L  +L     +PW+ G + L  D  +  + A +ER+  ++W  VL+++VGS       PP  V+  +  + L++       AL ITD GYEFMLK+ HVQ W+ +   I     T    ++D+L FLFQ+SYC+ G+ Y +  LT+TQR L  DF+D GLLF+++  S RFY TS+AVNLIFG +               G   G+  +   P  AP   +  +   + ++VETNF++ AYT S LH AMLS+F+++ A LPN  +G ITRES+R AL  GI  +Q+ DFL  HAHP +RR TPV+PENIADQ+ LWERER+R++  EG+L D  + ++E +  + D+A  ++ L WS P+
Sbjct:  260 SLTMDAFDFLETLPPATLERLY--------------QDPWACQAIFQALPPLAQQFVMRLLPSNAGVPRSLLEQWVVPEPGDAKPMPPQFHAA-LHKLEGLKVFVH-QDGA-YRSHPTFQKQLMYALSNLGGSPWERGRLQLPKDPENTFAAADLERYARARWDSVLHYMVGSTAVQE--PPQSVVDILLRTKLLQASGADSRALHITDTGYEFMLKDIHVQMWIFMLEYIRTLDNTGTLKQEDILQFLFQISYCQTGEYYAVADLTETQRLLLGDFIDFGLLFRKRPNSDRFYTTSLAVNLIFGGSTGQKRSHVSLTSSFAGVRAGLKSQVADPRHAPTADHGAQ---LLVVVETNFKIYAYTTSTLHVAMLSVFVDIVARLPNLAIGFITRESLRSALIHGISAQQIYDFLMKHAHPKMRRNTPVIPENIADQIYLWERERNRVQFMEGILFD-GFNTKEDYESVRDYAEDLKVLTWSDPI 719
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BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: A0A485KU14_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KU14_9STRA)

HSP 1 Score: 306 bits (785), Expect = 3.100e-92
Identity = 189/476 (39.71%), Postives = 268/476 (56.30%), Query Frame = 2 
Query:  104 LNVFEYLEKLPPDALDNLYGKQQASAAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFV-EGSVEKSMLKSWVKKEYQRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPWQGDVPLTADRSPPSVAKIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPASGGGDGGVGQRQPQ------------PAGAPLGGNKGE-------DTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQEGVLMDVSYASREAFRGIIDFANTMQGLLW 1468
            +N FE+L  LP  ++D LY  Q A            W C+A+ QS+  L +Q VMRLLF  + S  +  L  WV++  Q+    +I KL  LRVL   K  +E+ LNP F+E L+++L +   +PW+      A   P S   +E++   +W  VL+F+VGS       PP  V+  +E + LM+P      AL ITD GYEFMLK+ H Q W+ V   I    R      +++L FLFQ+SYC++ + Y +G LT+ Q+ L  D V+LGLLF++  K+TRFY TS+AVNLIFG           +GQ +               +G  L   KG           + I+VETNF+V AYT S LH AMLS+F+++ A LPN  VG +TRES+R AL  GI   Q+ DFL  HAHP +   +PV+PENIADQ+ LW+RER+R++   G L+D  + + E F  ++++A  +  LLW
Sbjct:    1 MNAFEFLATLPAASVDRLY--QDA------------WACQAVFQSMEPLGQQIVMRLLFTSQVSYSQESLLEWVQEPAQQKMIHAIEKLSHLRVLRVVKGQREFVLNPVFQEQLKKALSSLGGSPWEAGRQKLAAEPPISALDLEQYARKRWDAVLHFMVGSTAV--PAPPPTVIGILEHTRLMQPSSSDARALHITDTGYEFMLKDVHAQTWIFVLEYIKDIDRRGILSAEEMLQFLFQMSYCRMNEYYAIGDLTRNQQQLLGDLVELGLLFRKGTKATRFYTTSLAVNLIFGGV---------LGQTRTSISMVQSLEQVHSASGQQL--TKGAVPRPVAVAAHLLIVVETNFKVYAYTESTLHIAMLSVFVDIVARLPNLAVGYLTRESIRSALIHGISAEQIYDFLMQHAHPKMLANSPVIPENIADQLYLWQRERNRIKFDAGELLD-GFVTTEDFDTVVNYAQDLDVLLW 448
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BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: D0NRC9_PHYIT (General transcription factor IIH subunit 4 n=21 Tax=Phytophthora TaxID=4783 RepID=D0NRC9_PHYIT)

HSP 1 Score: 306 bits (783), Expect = 8.140e-92
Identity = 186/479 (38.83%), Postives = 271/479 (56.58%), Query Frame = 2 
Query:  104 LNVFEYLEKLPPDALDNLYGKQQASAAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFVEGSVEKSMLKSWV------KKEYQRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPWQ-GDVPLTADRSPPSVA-KIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPAS-----------GGGDGGVGQRQPQPAGAPLGGNKGEDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQEGVLMDVSYASREAFRGIIDFANTMQGLLWSSPL 1480
            ++ F++LE LPP  L+ LY                 W C+A+ Q+LP LA+Q+VMRLL    +V + +L+ WV       K       A+++KL  LRV +    G  Y+ +P F++ L  +L     +PW+ G + L  D      A  +ER+  ++W  VL+++VGS       PP  V+  +  + L++       AL ITD GYEFMLK+ HVQ W+ +   I     T    ++D+L FLFQ+SYC+ G  Y +  LT+TQR L  DF+D GLLF+++  S RFY TS+AVNLIFG +               G   G+  +   P  AP          + ++VETNF++ AYT S LH AMLS+F+++ A LPN  +G ITRES+R AL  GI  +Q+ DFL  HAHP +RR +PV+PENIADQ+ LWERER+R++  EG+L D  + ++E +  + D+A  +  L WS P+
Sbjct:    1 MDAFDFLETLPPATLERLY--------------QDPWACQAIFQALPSLAQQFVMRLLPTNSAVPRDLLEQWVVPIPGETKRMPPQFNAALQKLEGLRVFVQQDGG--YKPHPTFQKQLMYALSNLGGSPWERGRLHLPRDPENTFAAVDLERYARARWDLVLHYMVGSTAVQE--PPQSVVDILLRTKLLQASGADSRALHITDTGYEFMLKDIHVQMWIFMLEYIRTLDNTGTLKQEDILQFLFQISYCQTGGYYAVADLTETQRLLLGDFIDFGLLFRKRQNSDRFYTTSLAVNLIFGGSTGQKRSHVSLTSSFAGVRAGMKSQVADPRQAPT---VDHGARLLVVVETNFKIYAYTSSTLHVAMLSVFVDIVARLPNLAIGFITRESLRSALIHGISAQQIYDFLMKHAHPKMRRNSPVIPENIADQIYLWERERNRVQFLEGILFD-GFNTKEDYESVRDYAKGLMVLTWSDPI 457
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHY7_ECTSI5.700e-29483.75General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A6H5KJZ4_9PHAE1.190e-18174.73General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A836C856_9STRA2.280e-10043.17General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A024TBA0_9STRA2.520e-9540.97General transcription factor IIH subunit 4 n=2 Tax... [more]
W4FDT1_9STRA2.600e-9439.75General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A0P1AW06_PLAHL2.250e-9339.46General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A6G0WGX7_9STRA2.090e-9239.19General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A6G0N8J6_9STRA2.270e-9239.54General transcription factor IIH subunit 4 n=3 Tax... [more]
A0A485KU14_9STRA3.100e-9239.71General transcription factor IIH subunit 4 n=1 Tax... [more]
D0NRC9_PHYIT8.140e-9238.83General transcription factor IIH subunit 4 n=21 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig77contigP-fluviatile_contig77:393388..400604 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score836.6
Seed ortholog evalue6.3e-240
Seed eggNOG ortholog2880.D7FHY7
Preferred nameGTF2H4
KEGG rclassRC00055,RC00523
KEGG koko:K01873,ko:K03144
KEGG ReactionR03665
KEGG Pathwayko00970,ko03022,ko03420,ko05203,map00970,map03022,map03420,map05203
KEGG ModuleM00290,M00359,M00360
GOsGO:0000109,GO:0000112,GO:0000428,GO:0000438,GO:0000439,GO:0000717,GO:0000988,GO:0000990,GO:0000991,GO:0001109,GO:0001111,GO:0001112,GO:0001113,GO:0001120,GO:0001671,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005675,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006293,GO:0006294,GO:0006296,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006355,GO:0006357,GO:0006360,GO:0006361,GO:0006363,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006396,GO:0006397,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008047,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009452,GO:0009628,GO:0009889,GO:0009987,GO:0010224,GO:0010467,GO:0010468,GO:0010556,GO:0016043,GO:0016070,GO:0016071,GO:0016310,GO:0016591,GO:0016604,GO:0016607,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0022607,GO:0030234,GO:0030880,GO:0031323,GO:0031326,GO:0031334,GO:0031974,GO:0031981,GO:0032392,GO:0032508,GO:0032774,GO:0032781,GO:0032806,GO:0032991,GO:0033554,GO:0033683,GO:0034367,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0036260,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043412,GO:0043462,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051252,GO:0051276,GO:0051336,GO:0051345,GO:0051716,GO:0055029,GO:0060255,GO:0060589,GO:0060590,GO:0061695,GO:0065003,GO:0065004,GO:0065007,GO:0065009,GO:0070013,GO:0070816,GO:0070911,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090575,GO:0097159,GO:0097659,GO:0098772,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1902494,GO:1902554,GO:1902911,GO:1903506,GO:1990234,GO:1990391,GO:2000112,GO:2001141
EggNOG free text desc.Helicase conserved C-terminal domain
EggNOG OGsCOG5144@1,KOG3471@2759
EC6.1.1.9
COG Functional cat.KL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03021,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTranscription factor TFIIH subunit p52/Tfb2
Ec32 orthologEc-12_006390.1
Exons9
Model size2400
Cds size1596
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817201.836662-UTR-P-fluviatile_contig77:393387..3941631622817201.836662-UTR-P-fluviatile_contig77:393387..394163Porterinema fluviatile SAG_2381UTRP-fluviatile_contig77 393388..394163 -
1693571502.6768682-UTR-P-fluviatile_contig77:393387..3941631693571502.6768682-UTR-P-fluviatile_contig77:393387..394163Porterinema fluviatile SAG_2381UTRP-fluviatile_contig77 393388..394163 -
1622817201.9571602-UTR-P-fluviatile_contig77:400576..4006041622817201.9571602-UTR-P-fluviatile_contig77:400576..400604Porterinema fluviatile SAG_2381UTRP-fluviatile_contig77 400577..400604 -
1693571503.8527198-UTR-P-fluviatile_contig77:400576..4006041693571503.8527198-UTR-P-fluviatile_contig77:400576..400604Porterinema fluviatile SAG_2381UTRP-fluviatile_contig77 400577..400604 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817201.8499866-CDS-P-fluviatile_contig77:394163..3944511622817201.8499866-CDS-P-fluviatile_contig77:394163..394451Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 394164..394451 -
1693571503.049057-CDS-P-fluviatile_contig77:394163..3944511693571503.049057-CDS-P-fluviatile_contig77:394163..394451Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 394164..394451 -
1622817201.8607938-CDS-P-fluviatile_contig77:395247..3954751622817201.8607938-CDS-P-fluviatile_contig77:395247..395475Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 395248..395475 -
1693571503.5869207-CDS-P-fluviatile_contig77:395247..3954751693571503.5869207-CDS-P-fluviatile_contig77:395247..395475Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 395248..395475 -
1622817201.870777-CDS-P-fluviatile_contig77:396133..3961901622817201.870777-CDS-P-fluviatile_contig77:396133..396190Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 396134..396190 -
1693571503.605331-CDS-P-fluviatile_contig77:396133..3961901693571503.605331-CDS-P-fluviatile_contig77:396133..396190Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 396134..396190 -
1622817201.8807747-CDS-P-fluviatile_contig77:396877..3970961622817201.8807747-CDS-P-fluviatile_contig77:396877..397096Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 396878..397096 -
1693571503.6204152-CDS-P-fluviatile_contig77:396877..3970961693571503.6204152-CDS-P-fluviatile_contig77:396877..397096Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 396878..397096 -
1622817201.8904498-CDS-P-fluviatile_contig77:397473..3976091622817201.8904498-CDS-P-fluviatile_contig77:397473..397609Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 397474..397609 -
1693571503.6314125-CDS-P-fluviatile_contig77:397473..3976091693571503.6314125-CDS-P-fluviatile_contig77:397473..397609Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 397474..397609 -
1622817201.9059625-CDS-P-fluviatile_contig77:397920..3980561622817201.9059625-CDS-P-fluviatile_contig77:397920..398056Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 397921..398056 -
1693571503.645643-CDS-P-fluviatile_contig77:397920..3980561693571503.645643-CDS-P-fluviatile_contig77:397920..398056Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 397921..398056 -
1622817201.9165974-CDS-P-fluviatile_contig77:398624..3987031622817201.9165974-CDS-P-fluviatile_contig77:398624..398703Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 398625..398703 -
1693571503.654897-CDS-P-fluviatile_contig77:398624..3987031693571503.654897-CDS-P-fluviatile_contig77:398624..398703Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 398625..398703 -
1622817201.929124-CDS-P-fluviatile_contig77:399092..3992091622817201.929124-CDS-P-fluviatile_contig77:399092..399209Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 399093..399209 -
1693571503.6632276-CDS-P-fluviatile_contig77:399092..3992091693571503.6632276-CDS-P-fluviatile_contig77:399092..399209Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 399093..399209 -
1622817201.9449613-CDS-P-fluviatile_contig77:400240..4005761622817201.9449613-CDS-P-fluviatile_contig77:400240..400576Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 400241..400576 -
1693571503.8383338-CDS-P-fluviatile_contig77:400240..4005761693571503.8383338-CDS-P-fluviatile_contig77:400240..400576Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 400241..400576 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig77.14167.1prot_P-fluviatile_contig77.14167.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig77 394164..400576 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig77.14167.1

>prot_P-fluviatile_contig77.14167.1 ID=prot_P-fluviatile_contig77.14167.1|Name=mRNA_P-fluviatile_contig77.14167.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=532bp
MDSHGSSSQSATAENSVMLSSSAMSLNVFEYLEKLPPDALDNLYGKQQAS
AAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFVEGSVEKSMLKSWVKK
EYQRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPW
QGDVPLTADRSPPSVAKIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMK
FMEESGLMRPVRGGGALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQ
PGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKA
KSTRFYPTSIAVNLIFGSAPASGGGDGGVGQRQPQPAGAPLGGNKGEDTS
IHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKA
LATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQ
EGVLMDVSYASREAFRGIIDFANTMQGLLWSSPLGGEEEEEEEDSDGGGR
LAGRKKLVVIAPAIVDSLNAAIVQNSWTSAF*
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mRNA from alignment at P-fluviatile_contig77:393388..400604-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig77.14167.1 ID=mRNA_P-fluviatile_contig77.14167.1|Name=mRNA_P-fluviatile_contig77.14167.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7217bp|location=Sequence derived from alignment at P-fluviatile_contig77:393388..400604- (Porterinema fluviatile SAG_2381)
GACAAACTAGAGGAGAGAGGCGAGCGTGATGGACAGCCACGGGTCGTCCA
GCCAGTCAGCGACAGCGGAAAATTCCGTGATGTTGTCGTCTTCAGCGATG
AGCCTGAACGTTTTCGAGTACTTGGAGAAACTGCCCCCAGACGCGCTCGA
CAATCTCTACGGAAAGCAGCAGGCTTCGGCGGCGGGGCAGAGCGCTAGGA
GCCATGGGCAATGGACCTGCAGGGCTCTGCTTCAGTCGCTTCCGCAGCTA
GCAAAGCAGTACGTGATGAGGCTATTGTTCGTTGAAGGCTCCGTGGAGAA
GAGTATGCTCAAGTCGTGGGTGAAGAAGGAGTATCAACGCGTCCACGCCG
CCTCGATCCGCAAGGTGTGTGTTGTGTTGGAGGCGGGGGGGGCATACTGT
CGGAGATCTCTACCAGAGATCTCGTGAAGAATACCAGAGAAAACAGCGAG
TGTCAATTTGAAAAACGCCTTTTGGGGTTAAGCATTGGTATTCCGTGCTT
TCTTGTCCAGCTGTGGGTTGCATTTGGCTCAAATCTAGGAACGATACGGA
GAACGCTCCCAGCAACCCACGCAAGGACGATCTAGGAGGCGCGGGACCAA
CGTGGGTTTGAAGACACTGGTGTACACCTTTCCCTCATGCTATTGTACAT
TTTTTGTATTTTGGGTGGGAGACGGCTCACCCGTACCTTTCCTTGCACGG
CTCCGATCAGATCGCAAATCCAACGAGTAGACACACCCAACCTGCGCGCC
TGTGTCAACCCGCATCGGCCTGGCTGATCCCCGATCCGTTTCTGGCGCAT
TTTCGGCGCCGCGCCGCGGGTGTGTGTTTGCATCGGCATTCCCATCCCAA
ACGAGCCGCTTCATTTGCCCTGTTCTGTGTAGCCGGAAGACCCTTACACT
CCCTAGCAGAATATTTTGCTTGCCTCGCGTGGAAACAGGTGCGCTCCTCC
CGCACATATCGACCGAAGCAAGCATTCATGTTTCTCGGCAAGCAGACCAC
GACGGTGCGCTGCGCTGCCGCCTTCTCCCGTGTGTTTTTGCCCCAGTACG
TGCTGCAGATCAAGTGATGATGAGGTTGCAACCCCCCCCTGCAGCAGTTG
CCTCGTAGACCGCACTCCAACACATCTCAGTCAAGAAATGATCAAACGAC
GTGTACGTCTGCCCCCTCTGTGCCGCGTGCTCACCGTTGGTATTTCCGTT
AATAGTGCGAAGCTTTTCTCGGCGTTCCCCCGTCTGATTTCGATGAGCGC
CAACGATGGTCTTTCAAATTTCGCAACAGTTTTGTTCGTCGTTTATTCTT
CCGATCACGCACTCGAAACACCCATATCCTACGAAACACGACACTGCGGT
GGGGTTGGGTGAAACTACGATCACAAACAACGGATGCCGGTGCAGCTAGT
GAGCCTTCGAGTGCTGCTGACCACCAAGGACGGGCAGGAGTACCGCTTGA
ACCCGCACTTCCGGGAAAACCTGCAGCGATCTCTCTGCGCGCCGGACAAG
ACGCCATGGCAGGTGTGCCATCGATATTTTTGGCGTTGCGGTATGCGCGT
GTGGTATTGCTTGTGGAGTCGTGACATGTAGAAAAATGGCTCATGGCGGT
GATGACGTCGGTGGGGGAAAACAGCAATTATTGTTGCAGCGGTTGGTACG
AAGCGGTGTCGTGTTTTAACATTCTTGAAATGTTCCGCCTGGCGTGTGCG
CATGCGCGCCGTGTTCTTGTTGTTGTGCTGTGTGTTGCTTTTGATGGGTT
TACCTTGTCCCTTCGCCCCCATCTTTTTGATGCAGACTGCCATGTTTGTT
TGCTTGATTGTTTGCGCGATACCAGCGTGTTTTATTTGTTTGTTTGATCT
CGGAGTACCGTTCTTTGTGACATGCTGCTGTCTTTCGTTACTTTTTGCAA
GGGGGACGTGCCTCTGACGGCGGACAGAAGCCCGCCAAGCGTGGCCAAGA
TCGAGCGGCATATGCACTCGCAGTGGCAAGGTTAGCAGCAGGCGACCCCC
GTTTCAGGTTGTGTATTCCGGATCAAGAATCTCTTGTTCCCTGGCTCTCA
CGCATTTGTGCTCACAGCAGGACAGCGCTTCACCGACGCGACGTCTGGGT
AGAACCGTTCCCCCTTCGTGCGGCCACGTACTAGTTTTTAATAATCCGGA
GTATTCGAAAGCAGCACGACTGCTGCGGCTGAGAAAAGTCGCAGAATGAA
AACGATGGAAGTGGGCTGAAGCAGAGGGTTATGTTGCGATTCCACTCCCG
AGTGGTCTGATGTGCAGCCTGGCGAGGTCGAGCGAGCGCGCTCCTTGCCA
TCCACACTACTTCACCACGCCAGTCCGTCCTTCCTTCCTCCCTTCTTGTC
GTCAGCGACGATCCGACTGATAAAAATAGGCGTGCTCCCCCCCAAGGTTA
CACTTCCAGTTGGACGGGAGTAAACGTCGTGTTTTGTCCAACAATTCGTG
GCGGCGGTGGGGCCATATGTGTCATGGGTGACCCCTACCCTCCCCCAACA
CCTCTGCCCCCCACTTCCCTGCCTGTACCGCTGCGCCCCCCTCTCCAGAC
GTTTTGTATTTCCTTGTGGGTTCCGACGAGGAGGGCAGGAGCATACCGCC
CGCTAGGGTGATGAAGTTCATGGAGGAGAGCGGGCTGATGAGGCCCGTCA
GGGGGGGGGGTGCTCTTCGCATCACCGACAAGGGGTAAGCGCGACGGGAA
GAACATTCAATACTGGGTGGGGGGGTTGCCTTGCAGCGGGCATTCCGTGC
TATTGAAACATGAAGCTCTTTAGCGTGCATCTGTGATATCCCTTGATATA
AGCGAGGAAGGGAATTATTGTCCTTTCGGCGTGCTCGCGCACGAGGCACA
TCTCTGTAATATCTGATGTCCAACAGTATTGGAGGGGGACAATCGTAGCC
TTACAATGCTGCGCCACGACGCAAATTTTATCGTATGCAATCGCCTTCGT
GTTTGCCTTTGTATTGCTCCCCCCAAACAAAAAACACATGCACAGATACG
AGTTTATGCTTAAGGAGGCACACGTTCAGGCGTGGATGGTAGTCCACGCC
CTGATCAACGGCTACGGAAGGACCCAGCCCGGCTGTAGGGATGACCTCCT
CGCCTTCCTCTTCCAACTTAGCTACTGCAAGGTAATGGCCTTACCCCACG
TGGCCTAAAGTTTGCATCATCCAACAGCCCATGTGTTGGCATAGAAATTG
TATTTGGGTTACAACTCGTCGTTGCTTTCGTGTTCACGCAGCAGCGGCGG
CCAAGTATTACCGCGCTTCGCGCTATTTTGCGCCCCTGGCCGGTGTGTGA
GCGTGAGGAAATCTCTTGTCTATATTGCAAGCTACGTTAGGCGAAATAAA
AAAGTTAAACGGCGTCAACGAAACTTGACGGAAACTAGTCCCTGCGACAT
CTAGACAAGTATGATTTGGCTTTTCATGTGCGCCCAATCAGGGGCAGATA
TGATTTGGATTTTATGCGCGCCCAGTCAGAATCAATGACATTTGCAATCC
CGCTTCAGGTTGGAGACGCCTACCCGCTGGGAGCTCTGACCCAGACGCAG
CGAGACCTCGCCCAAGACTTTGTCGACCTTGGCCTTCTTTTCAAGAGGAA
GGCCAAATCCACCCGTTTTTACCCCACCTCCATAGCAGTCAACCTCATCT
TTGGTTCGGCTCCTGCCAGCGGGGGCGGCGACGGCGGTGTGGGACAGAGG
CAACCGCAACCTGCGGGGGCACCCTTGGTGAGAGAAAGGGCGACAGGCAG
ACAGACAAATAGGCGGACGCTCAGACGTACAGAAAAGAGGGGAGGGGGGA
ACGAGAGAGGAAGAGAGGAAGAGATAGAGCAAGGCAGACAGGCAGGCAGG
CAGGCAGGCAGATTGCCATACAAACAGACCGAGGCAAGCACATAGTGAGG
AAGGCATAAATTAGCACAGAGGTGGGTCGTGGCCGCGGGCGGTTGGGCCT
TCTTTTTTTCTCTGTTCGAGTAACTAGCGCCTTATCTCTATCACCTCGCC
CATTTCAGGTCGCACCTAGGCCCCCTCACAAGCGGCGACTCCCGACGGTA
CTGCTATAGCCTGCCCTGCATTGCGGCGACATGTTGACTCACATGATATG
TGTAATGCAGATGGCTATGCCCAGCATGGAGAGACCGGGTGGTTGTCCTT
GTTCCGACGCGTCGGTAGTGCGCTCGGGTTCATTGTTCGAACTTGTTCTT
TAAAAAAGGGTTGATTTTTGGGAGGATTCACAGCGATCGCTCTCCCTCCC
TTGAGACATACTCCACGTGCCACCCCTCCCACCTTCTCTTGGGAATCGGT
GTCTTCTGCGCGTATCCCTCCTGGATGACGATTGGTGGGGACGGCGTCAA
CCGCCTGCCGCTGCCACCACCGCGCAACATGCGACGGGGGACATGGGCGT
GGTTCATTCTACAGGGCGGCAATAAGGGGGAAGACACGAGCATTCACATC
ATCGTGGAGACGAACTTTCAGGTACGCGTACGCACAGGTCGTCGGTTGCC
CCTACTTTTGACATTGCTTGGTGTAGTGGGCATGCCTCTCCCTCCCCGTT
TCCTCCTTCTCCCCCCATCCCTCCCCTCTCCACCTCGTGCGGGCGGCCAG
AAAATCCTGTGTCACAGGGGCCAGGAAGACGGTTTTCCTGCATGGAGACG
CCAGCAGCACTTGAAAAGCAGCAAGAGCAACTTGTGCCTCGTTGAGCCAG
CGTGTTGCCGCTGGCAAAAGCAGAGGTTTGTGTCCGTCTCTCAGGCGAAC
GAAGGATGTCGGTTTAAAATTCTGCTCATTAGTTTGCCTGCTTTTCAGAG
TTTTGTCCGTGCCTTGCTTTCGGCGTTGCCCCCGGCGAGAGCGTCGTCTT
CGGAGTTTGTGTCTCAATGGTGAAGCCGTTTGCTCTTGTGAGCCGTTCTG
TTCTTATGCCGTGTCCGGGTGATCGATCCGCACCCACACGATTTTCGCCC
AGCCGACAAAGCGGAGAAAGCAGGATGTGAAGCGGGTAAATCGTGCTGAT
CACGGGGGGAGGTTCGAAAGATCGGCCGTAAGTGCTGTGCTTTCATTATA
AACATGCTGAACGAACGCTGTCTCCTGCACGGCGCCGTGCGGTGCCGTCT
TGTTTTTTCAATGTTTTTCTGCAATGAAGGTGATCGCGTACACACGGTCG
AAGCTGCACTTCGCAATGCTCAGCCTCTTCCTTGAGCTGCGCGCGCTGCT
GCCGAACGCGATCGTTGGGGCCATCACGCGGGAGAGCATGCGGAAGGCGC
TCGCCACGGGCATCAAAGGCCGCCAGGTTCTGGACTTCCTCAAGTGGCAC
GCACATCCCGTTGTTCGGAGGCGGACCCCCGTAGTCCCGGAGAACATTGC
TGACCAGGTACGGTACGGTTAAGCACGGTTCGGGTACGGCAAGATACGGT
ACGGTATGGTCCGATACGATACGATACATTTCGGTCCGGTTCATTTTTGA
TCGGCACGTGTAGGTATGGTTCGGTGCCGTACTATGCGGTTCGGCACTGC
ACGGTCTGGCACGGTATCGCACGGTATGGTAAAGCACGGTATACTCGCGG
TAGGGTGCGGTACGTCACGTTCGTCATCGCACGCGTCGTTTGGGACTTGT
ACGGTCGGGTAGGGTACGGTATGGTAGACCACGGCATTGCGCGGCGTTGC
ACGGCACGTCACGGCAAAGCATGGCACGTTACGGTAGTGTGCGGTGCGGT
GCGGCATGGTAAGGTACGGCACGCTGCGGTATGATTTGCGCTGGTTTGGT
TTGGTCGGAAACGCACGGGTGAATTTTGAAACCATCGCAACCCTTGACTG
ACACTTCGACCTTCTGAGGCGTTTTGTGCTGAGGCGGCCAACGGGGAGAG
CTGGAGGAATGGGGGGGTAGCACCCCCCCGCGCGGCGTCGTTTCTTCGGA
AAGAGTGATGAAAACCAGTCTTTGTTTTGAAGTTGGTAGGGACGTTTTTT
GGATATGTGGCGCGGATCTATTGCCAAGTTCTTCCCTCTTTCATCACCCG
TCCCTGCTCATCCTCCTCCCCGTTCCTCCCGCCCTGCGATCGATCGCGAA
CAGCGTCAAGTGTCTGAGTGATCGGGCATCCTTATTTTTCGTGCGCAAAA
TCACTATGCCTTTTTTCCAACGCCACCCATCGAACGATCAATCCGCTCAC
CAGGTTCTGCTGTGGGAACGAGAACGAGATCGCATGGAGCACCAAGAGGG
CGTGCTAATGGACGTGTCATACGCCAGCAGAGAAGCCTTCCGAGGCATTA
TCGACTTCGCCAACACCATGCAGGGTCTGCTTTGGAGCAGTCCGCTTGGG
GGGGAGGAGGAGGAAGAGGAGGAGGACAGTGACGGCGGCGGTCGACTCGC
CGGCCGCAAAAAGCTTGTTGTGATCGCGCCGGCAATTGTCGACAGTTTAA
ACGCCGCCATCGTTCAAAACTCGTGGACGAGCGCATTTTGAAGGACGATG
GGGCCGCGATTTCTGTCTCATGCCCTGACGAGGTCACATGTTTGAGGGTC
ACCGTTCGGGGCGAGAAAGCAAGCGGTATATGTGATGCCTTCCTTCCCCG
CTCTGTTTTTGTTTGCTCGCACTGCGGTGTACCCAATGGAGTGGTCCATT
GCGTCATCACCGGTAATTTGTCGACTTATCTGTGCGAGTGGGAGTGCAGC
CTTGTTTTTTCGGGGGGGGGGGTTGTCTTCCCCTGTCACCGCGTTCCGTC
GTACATTTGAGCGTATCCAAACAATCGACAAAAGCGCTGCTTCCGTCACT
GCAAGGGGGGATGAATCCAGTGATTGCTCGCGAGGGTTCTTACAGTGGCT
TTTTCCACGGCCAGATGGTTCTGCCAATCAGGCGAAGTGTTTCTTCCCTT
CACCGCGCTGGTTCCATCGTGCAAGTAACTGCCCGATCTAAATAAACGAA
GTGGTAGCAAGCAGCAGCCAATGACCTAGCTGATGGTCGACAGTGCGCCA
AGCAAGTAGTACAAGCGCAGCGCTTTCTCCCTCCAGCCTTGCGGCCATGA
AAACTGTTATGGCATTCATGTTTCGACGTGAAAACGGATCGCCGTTGATT
GAGCACTTGTTTGCGCATCGACTTCGTCACTTCCCTCTTCTCACTGCGTC
GTACGTCTGCCAGCGCGTCCACGGTAGACATGCACGATTTGACGCATGAA
ATTCGACCGACACTTAGAGTTCTGGCCTACGAGGCTTTGCTTGCAGAGGG
GCTGGTTGGCGACATGG
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Coding sequence (CDS) from alignment at P-fluviatile_contig77:393388..400604-

>mRNA_P-fluviatile_contig77.14167.1 ID=mRNA_P-fluviatile_contig77.14167.1|Name=mRNA_P-fluviatile_contig77.14167.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3192bp|location=Sequence derived from alignment at P-fluviatile_contig77:393388..400604- (Porterinema fluviatile SAG_2381)
ATGGACAGCCACGGGTCGTCCAGCCAGTCAGCGACAGCGGAAAATTCCGT
GATGTTGTCGTCTTCAGCGATGAGCCTGAACGTTTTCGAGTACTTGGAGA
AACTGCCCCCAGACGCGCTCGACAATCTCTACGGAAAGCAGCAGGCTTCG
GCGGCGGGGCAGAGCGCTAGGAGCCATGGGCAATGGACCTGCAGGGCTCT
GCTTCAGTCGCTTCCGCAGCTAGCAAAGCAGTACGTGATGAGGCTATTGT
TCGTTGAAGGCTCCGTGGAGAAGAGTATGCTCAAGTCGTGGGTGAAGAAG
GAGTATCAACGCGTCCACGCCGCCTCGATCCGCAAGATGGACAGCCACGG
GTCGTCCAGCCAGTCAGCGACAGCGGAAAATTCCGTGATGTTGTCGTCTT
CAGCGATGAGCCTGAACGTTTTCGAGTACTTGGAGAAACTGCCCCCAGAC
GCGCTCGACAATCTCTACGGAAAGCAGCAGGCTTCGGCGGCGGGGCAGAG
CGCTAGGAGCCATGGGCAATGGACCTGCAGGGCTCTGCTTCAGTCGCTTC
CGCAGCTAGCAAAGCAGTACGTGATGAGGCTATTGTTCGTTGAAGGCTCC
GTGGAGAAGAGTATGCTCAAGTCGTGGGTGAAGAAGGAGTATCAACGCGT
CCACGCCGCCTCGATCCGCAAGCTAGTGAGCCTTCGAGTGCTGCTGACCA
CCAAGGACGGGCAGGAGTACCGCTTGAACCCGCACTTCCGGGAAAACCTG
CAGCGATCTCTCTGCGCGCCGGACAAGACGCCATGGCAGCTAGTGAGCCT
TCGAGTGCTGCTGACCACCAAGGACGGGCAGGAGTACCGCTTGAACCCGC
ACTTCCGGGAAAACCTGCAGCGATCTCTCTGCGCGCCGGACAAGACGCCA
TGGCAGGGGGACGTGCCTCTGACGGCGGACAGAAGCCCGCCAAGCGTGGC
CAAGATCGAGCGGCATATGCACTCGCAGTGGCAAGGGGGACGTGCCTCTG
ACGGCGGACAGAAGCCCGCCAAGCGTGGCCAAGATCGAGCGGCATATGCA
CTCGCAGTGGCAAGACGTTTTGTATTTCCTTGTGGGTTCCGACGAGGAGG
GCAGGAGCATACCGCCCGCTAGGGTGATGAAGTTCATGGAGGAGAGCGGG
CTGATGAGGCCCGTCAGGGGGGGGGGTGCTCTTCGCATCACCGACAAGGG
ACGTTTTGTATTTCCTTGTGGGTTCCGACGAGGAGGGCAGGAGCATACCG
CCCGCTAGGGTGATGAAGTTCATGGAGGAGAGCGGGCTGATGAGGCCCGT
CAGGGGGGGGGGTGCTCTTCGCATCACCGACAAGGGATACGAGTTTATGC
TTAAGGAGGCACACGTTCAGGCGTGGATGGTAGTCCACGCCCTGATCAAC
GGCTACGGAAGGACCCAGCCCGGCTGTAGGGATGACCTCCTCGCCTTCCT
CTTCCAACTTAGCTACTGCAAGATACGAGTTTATGCTTAAGGAGGCACAC
GTTCAGGCGTGGATGGTAGTCCACGCCCTGATCAACGGCTACGGAAGGAC
CCAGCCCGGCTGTAGGGATGACCTCCTCGCCTTCCTCTTCCAACTTAGCT
ACTGCAAGGTTGGAGACGCCTACCCGCTGGGAGCTCTGACCCAGACGCAG
CGAGACCTCGCCCAAGACTTTGTCGACCTTGGCCTTCTTTTCAAGAGGAA
GGCCAAATCCACCCGTTTTTACCCCACCTCCATAGCAGTCAACCTCATCT
TTGGTTCGGCTCCTGCCAGCGGGGGCGGCGACGGCGGTGTGGGACAGAGG
CAACCGCAACCTGCGGGGGCACCCTTGGTTGGAGACGCCTACCCGCTGGG
AGCTCTGACCCAGACGCAGCGAGACCTCGCCCAAGACTTTGTCGACCTTG
GCCTTCTTTTCAAGAGGAAGGCCAAATCCACCCGTTTTTACCCCACCTCC
ATAGCAGTCAACCTCATCTTTGGTTCGGCTCCTGCCAGCGGGGGCGGCGA
CGGCGGTGTGGGACAGAGGCAACCGCAACCTGCGGGGGCACCCTTGGGCG
GCAATAAGGGGGAAGACACGAGCATTCACATCATCGTGGAGACGAACTTT
CAGGGCGGCAATAAGGGGGAAGACACGAGCATTCACATCATCGTGGAGAC
GAACTTTCAGGTGATCGCGTACACACGGTCGAAGCTGCACTTCGCAATGC
TCAGCCTCTTCCTTGAGCTGCGCGCGCTGCTGCCGAACGCGATCGTTGGG
GCCATCACGCGGGAGAGCATGCGGAAGGCGCTCGCCACGGGCATCAAAGG
CCGCCAGGTTCTGGACTTCCTCAAGTGGCACGCACATCCCGTTGTTCGGA
GGCGGACCCCCGTAGTCCCGGAGAACATTGCTGACCAGGTGATCGCGTAC
ACACGGTCGAAGCTGCACTTCGCAATGCTCAGCCTCTTCCTTGAGCTGCG
CGCGCTGCTGCCGAACGCGATCGTTGGGGCCATCACGCGGGAGAGCATGC
GGAAGGCGCTCGCCACGGGCATCAAAGGCCGCCAGGTTCTGGACTTCCTC
AAGTGGCACGCACATCCCGTTGTTCGGAGGCGGACCCCCGTAGTCCCGGA
GAACATTGCTGACCAGGTTCTGCTGTGGGAACGAGAACGAGATCGCATGG
AGCACCAAGAGGGCGTGCTAATGGACGTGTCATACGCCAGCAGAGAAGCC
TTCCGAGGCATTATCGACTTCGCCAACACCATGCAGGGTCTGCTTTGGAG
CAGTCCGCTTGGGGGGGAGGAGGAGGAAGAGGAGGAGGACAGTGACGGCG
GCGGTCGACTCGCCGGCCGCAAAAAGCTTGTTGTGATCGCGCCGGCAATT
GTCGACAGTTTAAACGCCGCCATCGTTCAAAACTCGTGGACGAGCGCATT
TTGAGTTCTGCTGTGGGAACGAGAACGAGATCGCATGGAGCACCAAGAGG
GCGTGCTAATGGACGTGTCATACGCCAGCAGAGAAGCCTTCCGAGGCATT
ATCGACTTCGCCAACACCATGCAGGGTCTGCTTTGGAGCAGTCCGCTTGG
GGGGGAGGAGGAGGAAGAGGAGGAGGACAGTGACGGCGGCGGTCGACTCG
CCGGCCGCAAAAAGCTTGTTGTGATCGCGCCGGCAATTGTCGACAGTTTA
AACGCCGCCATCGTTCAAAACTCGTGGACGAGCGCATTTTGA
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