prot_P-fluviatile_contig76.14065.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig76.14065.1
Unique Nameprot_P-fluviatile_contig76.14065.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length54
Homology
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BLAST of mRNA_P-fluviatile_contig76.14065.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 49.7 bits (117), Expect = 1.680e-5
Identity = 23/28 (82.14%), Postives = 24/28 (85.71%), Query Frame = 0 
Query:   27 RYAALDAYACLKLHTRINELSDSIFREG 54
            RYAALDAYACL LH RI ELSDSIFR+ 
Sbjct:  391 RYAALDAYACLLLHGRIGELSDSIFRDA 418
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig76.14065.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JET4_9PHAE1.680e-582.143'-5' exonuclease domain-containing protein n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig76contigP-fluviatile_contig76:52932..53429 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig76.14065.1mRNA_P-fluviatile_contig76.14065.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig76 52932..53429 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig76.14065.1 ID=prot_P-fluviatile_contig76.14065.1|Name=mRNA_P-fluviatile_contig76.14065.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=54bp
RGLPTLAGYRLPLWWTCALWLWSVKWRYAALDAYACLKLHTRINELSDSI
FREG
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