prot_P-fluviatile_contig75.14000.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig75.14000.1
Unique Nameprot_P-fluviatile_contig75.14000.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length77
Homology
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BLAST of mRNA_P-fluviatile_contig75.14000.1 vs. uniprot
Match: D8LRC8_ECTSI (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC8_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 5.130e-24
Identity = 50/74 (67.57%), Postives = 60/74 (81.08%), Query Frame = 0 
Query:    1 MHRTRVLGLYRGILQRARAIEDKDVAAEARRQFKSFRHETDSLKIQMLVTDATNYLETLQGTTGETGTSIGGGE 74
            MHR RVL LYRGIL+RARA+EDKDVA EAR+QFKS   ETD LK+QM+V DATN+LE +QG+T   G+  GGG+
Sbjct:    1 MHRARVLELYRGILKRARALEDKDVADEARKQFKSCLGETDPLKVQMMVADATNHLEAMQGSTRGAGSGGGGGD 74
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BLAST of mRNA_P-fluviatile_contig75.14000.1 vs. uniprot
Match: A0A6H5JB99_9PHAE (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB99_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 1.120e-21
Identity = 50/73 (68.49%), Postives = 58/73 (79.45%), Query Frame = 0 
Query:    1 MHRTRVLGLYRGILQRARAIEDKDVAAEARRQFKSFRHETDSLKIQMLVTDATNYLETLQGTTGETGTSIGGG 73
            MHR RVL LYRGIL+RARA+EDKDVA EARRQFKS   ETD LK+QM+V DATN+LE +QG+T   G+   GG
Sbjct:  117 MHRARVLELYRGILKRARALEDKDVADEARRQFKSCLGETDPLKVQMMVADATNHLEAMQGSTRGAGSGGRGG 189
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BLAST of mRNA_P-fluviatile_contig75.14000.1 vs. uniprot
Match: A0A835YQF9_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF9_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.300e-9
Identity = 30/70 (42.86%), Postives = 51/70 (72.86%), Query Frame = 0 
Query:    1 MHRTRVLGLYRGILQRARAIEDK----DVAAEARRQFKSFRHETDSLKIQMLVTDATNYLETLQGTTGET 66
            + + +VL  YR +L+ ARA+ED+    +VAA+ R +++++ HETDSLK++ML+ +A  +++TLQGT   T
Sbjct:   35 VRKRQVLHSYRQLLKCARAMEDRPSGQEVAAQVRERYRAYAHETDSLKLRMLLAEAAQHIDTLQGTVART 104
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig75.14000.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LRC8_ECTSI5.130e-2467.57Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A6H5JB99_9PHAE1.120e-2168.49Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A835YQF9_9STRA1.300e-942.86Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 5..57
e-value: 5.4E-10
score: 39.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig75contigP-fluviatile_contig75:22085..22995 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig75.14000.1mRNA_P-fluviatile_contig75.14000.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig75 21751..23247 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig75.14000.1 ID=prot_P-fluviatile_contig75.14000.1|Name=mRNA_P-fluviatile_contig75.14000.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=77bp
MHRTRVLGLYRGILQRARAIEDKDVAAEARRQFKSFRHETDSLKIQMLVT
DATNYLETLQGTTGETGTSIGGGEGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR