prot_P-fluviatile_contig74.13972.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig74.13972.1
Unique Nameprot_P-fluviatile_contig74.13972.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length987
Homology
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BLAST of mRNA_P-fluviatile_contig74.13972.1 vs. uniprot
Match: A0A6H5JM22_9PHAE (PPR_long domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM22_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 1.570e-67
Identity = 597/991 (60.24%), Postives = 663/991 (66.90%), Query Frame = 0 
Query:   15 PWWSGAFVMPALPQRCCSGAALSQRPLQQR--LKCRRRRRTSSDGSSGRGDPLHAMPPPRSCSAP--------NAEPPRPGDNGTAQRLRFAARWTASPNGGALSAAAAPQALSDPPPGATKVRCTA--------EETRDGTCGSSNSSVGGSSSGLGSRGNRNSTDGCRCGDGDAARMGG---EVRDVSALGRSKGRQQGFLVEEAERTAGGGGAKLADEAELGTVRDGYSRQLIVGLAKLARAGLWKASFKVLRVEQALVARKRAAAREDGEVYPNSSWLIVEALAYNTILAALSKAGKWQEAVLLMKEMETRGVRRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVVDGLPXXXXXXXXXXXXXXXXXXXXXXXXXXXKMRKTGIDPDEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAKASEAPWDPWMDETKPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKKGVERTEGVFQATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDFMRDPTSVPTVEETGGLTFPVLDLEGTTAASAAXXXXXXXXXXXXXXXXKLLAASSRVVAAEGRNGGTSAGTCSGVGSVVGATPVAFVVETPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSGGPSASLQRRTREGVRWPPRPDAYSFHTVIKAFAAAGMWQDAVAMLEGMADEMQRHLRGEEEVL-----MHGPAFSAKGVGRWPVDVDRFRRVFQLEIRNNEIVGHERGRMLSSGPSGPSPEVALRVKAMDVLAEIEREDKEARLRRQAL 979
            PW  GAFV P +P    S AALSQ+       LKCRRRR      S+G  + LHA+P PRSCS P        + +P      G ++  R AAR   +       ++AAPQ L+DP   A   +C          E    G+ G     V G    +    N ++      GD D   M G   E +          R +G   EE         A L  EAE+G+  D YSRQLI GL KLAR GLWKASFKVLRVEQAL ARK +AA+ +GE Y +SSW +VE  AYNTILAALS+AGKW+EAVLL+KEMETRG++RDA     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MEVVDGLPXXXXXXXXXXXXXXXXXXXXXXXXXX KM+K GI P+EVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       M KA+E PWD  +   KPPTXXXXXXXXXXXXXXXXXXXXXXXXX    EKKGVERTEG FQATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDFMRDP +V T+E  GGL FPVLD+ G      A                ++         AE R+ G++ G  S                 PV                                              +RRTREG  WPPRPDA SFHTV+KA A  GMW +AV +LE M +E +R LR +E  L                 +WPV++DRFR VF++E++NNE+VGHE+    S      SP+V+LR KAMD+L  +ERE+KEARL+RQ L
Sbjct:   12 PWRGGAFVAPVVP----SSAALSQQHGDGANWLKCRRRR----PRSNGIAERLHAVPSPRSCSTPASISLSQASIQP------GRSRARRPAARAGGNARKRGSHSSAAPQTLADP---AVHDQCGGGIAAGGGIEVDMFGSSGGMFGDVAGDVVNM--ERNVSAAAAGALGDDDHVEMMGTPPEEQHXXXXXXXXXRLKGTEEEEV--------ASL--EAEIGSGMDAYSRQLIGGLTKLARNGLWKASFKVLRVEQALNARKISAAQANGEEY-SSSWPVVEQKAYNTILAALSRAGKWEEAVLLLKEMETRGIQRDAVSYACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMEVVDGLPXXXXXXXXXXXXXXXXXXXXXXXXXXAKMQKVGIKPNEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLKIFVGMVKAAEEPWDADVGHPKPPTXXXXXXXXXXXXXXXXXXXXXXXXXLEDMEKKGVERTEGAFQATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDFMRDPNNVATIE-CGGLLFPVLDING------ASTDLNIVVDGLGRKNGEVNVGKGGRAPAEARSEGSAVGLPSTXXXXXXXXXXXXXXXXPVK---------------------------------------------RRRTREGGSWPPRPDAVSFHTVMKALATEGMWHEAVELLEEMVEERRRFLRSDEAFLETXXXXXXXXXXXXXXXQWPVNIDRFRGVFEMELKNNEVVGHEQRGDWSKFEV--SPQVSLRAKAMDLLMVMEREEKEARLKRQTL 918
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BLAST of mRNA_P-fluviatile_contig74.13972.1 vs. uniprot
Match: D7FWB8_ECTSI (PPR_long domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWB8_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 1.570e-57
Identity = 531/763 (69.59%), Postives = 568/763 (74.44%), Query Frame = 0 
Query:  222 DGYSRQLIVGLAKLARAGLWKASFKVLRVEQALVARKRAAAREDGEVYPNSSWLIVEALAYNTILAALSKAGKWQEAVLLMKEMETRGVRRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVVDGLPXXXXXXXXXXXXXXXXXXXXXXXXXXXKMRKTGIDPDEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAKASEAPWDPWMDETKPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKKGVERTEGVFQATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDFMRDPTSVPTVEETGGLTFPVLDLEGTTAASAAXXXXXXXXXXXXXXXXKLLAASSRVVAAEGRNGGTSAGTCSGVGSVVGATPVAFVVETPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSGGPSASLQRRTREGVRWPPRPDAYSFHTVIKAFAAAGMWQDAVAMLEGMADEMQRHLRGEEEVLM-----HGPAFSAKGVGRWPVDVDRFRRVFQLEIRNNEIVGHERGRMLSSGPSGPSPEVALRVKAMDVLAEIEREDKEARLRRQAL 979
            D YSRQLI GL KLAR GLWKASFKVLRVEQAL ARK +AA+ +GE Y  SSWLIVE  AYNTILAALS+AGKW+EAVLL+KEMETRG++RDA    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MEVVDGLPXXXXXXXXXXXXXXXXXXXXXXXXXX KM+K G+ P+EVS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       M KASE PWD  M   KPPTXXXXXXXXXXXXXXXXXXXXXXXX     EKKGVERTEGVFQATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDFMRDP +V T+E  G L FPVLD+ G +                       L   + VV   GR  G        VG     T           XXXX                                            TREG  WPPRPDA SFHTV+KA A  GMW +AV +LE M +E +R LR +E  L       G         +WPV++DRFR VF++E++NNE+VGHE+    S      SP+V+LR KAMD+L  +ERE+KEARL+RQ L
Sbjct:    2 DAYSRQLIGGLTKLARNGLWKASFKVLRVEQALNARKVSAAQANGEEYL-SSWLIVEQKAYNTILAALSRAGKWEEAVLLLKEMETRGIQRDAVSYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMEVVDGLPXXXXXXXXXXXXXXXXXXXXXXXXXXAKMQKVGVKPNEVSYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLKIFVGMVKASEVPWDADMGHPKPPTXXXXXXXXXXXXXXXXXXXXXXXXFLEDMEKKGVERTEGVFQATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDFMRDPNNVATIE-CGDLLFPVLDINGASTD---------------------LKDLTVVVDGLGRKNGEVTVDDRAVGLPSTMTTXXXXXXXXXXXXXX----------------------------------------XXXXTREGGSWPPRPDAVSFHTVMKALATEGMWHEAVELLEEMVEERRRFLRSDEAFLETTVGGRGXXXXXXXXXQWPVNIDRFRGVFEMELKNNEVVGHEQRGGWSKFEV--SPQVSLRAKAMDLLMVMEREEKEARLKRQTL 699
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig74.13972.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JM22_9PHAE1.570e-6760.24PPR_long domain-containing protein n=1 Tax=Ectocar... [more]
D7FWB8_ECTSI1.570e-5769.59PPR_long domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 492..537
e-value: 7.8E-8
score: 32.4
coord: 281..324
e-value: 2.6E-9
score: 37.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 526..558
e-value: 8.1E-5
score: 20.5
coord: 421..454
e-value: 6.6E-6
score: 24.0
coord: 281..313
e-value: 7.0E-7
score: 27.0
coord: 491..524
e-value: 9.4E-5
score: 20.3
coord: 575..607
e-value: 2.2E-5
score: 22.3
coord: 386..420
e-value: 6.6E-7
score: 27.1
coord: 457..489
e-value: 1.9E-4
score: 19.4
coord: 645..678
e-value: 1.9E-6
score: 25.7
coord: 315..348
e-value: 9.4E-5
score: 20.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 351..376
e-value: 0.057
score: 13.7
coord: 859..883
e-value: 0.13
score: 12.6
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 407..467
e-value: 2.2E-7
score: 30.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 454..488
score: 10.095
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 489..523
score: 11.466
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 419..453
score: 11.915
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 677..711
score: 8.035
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 607..641
score: 8.78
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 348..382
score: 8.791
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 278..312
score: 10.983
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 572..606
score: 10.863
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 856..886
score: 8.539
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 313..347
score: 9.942
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 642..676
score: 11.126
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 384..418
score: 11.564
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 524..558
score: 11.071
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 458..559
e-value: 5.0E-27
score: 96.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 279..449
e-value: 8.5E-47
score: 162.0
coord: 560..720
e-value: 2.3E-36
score: 127.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 279..446
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 580..706
e-value: 2.8E-7
score: 30.1
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 281..413
coord: 527..706
coord: 398..555

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig74contigP-fluviatile_contig74:326664..339179 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig74.13972.1mRNA_P-fluviatile_contig74.13972.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig74 326609..340035 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig74.13972.1 ID=prot_P-fluviatile_contig74.13972.1|Name=mRNA_P-fluviatile_contig74.13972.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=987bp
MAGETTTSTGRIIKPWWSGAFVMPALPQRCCSGAALSQRPLQQRLKCRRR
RRTSSDGSSGRGDPLHAMPPPRSCSAPNAEPPRPGDNGTAQRLRFAARWT
ASPNGGALSAAAAPQALSDPPPGATKVRCTAEETRDGTCGSSNSSVGGSS
SGLGSRGNRNSTDGCRCGDGDAARMGGEVRDVSALGRSKGRQQGFLVEEA
ERTAGGGGAKLADEAELGTVRDGYSRQLIVGLAKLARAGLWKASFKVLRV
EQALVARKRAAAREDGEVYPNSSWLIVEALAYNTILAALSKAGKWQEAVL
LMKEMETRGVRRDAVSYASLIAACGRGLQWKKALSALEEMRFAGIEANSF
VYSAAIDACAKGSQWQRALLLLQEMEVVDGLPANLICYNAAVIACGKAGR
PGEAIALLRKMRKTGIDPDEVSYLSAITACSRGGDWQQALRLLDEMKVFG
LRPDLKCYCSAITACGNGGKWREALLLLDTMHREGPPPNDYCYNAAISAC
GKSGQWRRSQDLLVTMRERGVRPDRVTFNAAIDACARSGRWREGINLFVD
MAKASEAPWDPWMDETKPPTPDATTYGAVITACSKGKQWQMAIRFLDDME
KKGVERTEGVFQATLACCARMGRWRECIIILDQMQKSRLTPRVAAYNSVV
TACGRAGEWQRAIAILRQMFSRGTTPDVITLNATMTACVQSKRLTHAKAI
LDFMRDPTSVPTVEETGGLTFPVLDLEGTTAASAATASSAAALATTIASR
HKLLAASSRVVAAEGRNGGTSAGTCSGVGSVVGATPVAFVVETPVAEARV
GGASFGGCLCDPPAAVAAPAAWSTRTSSGRSRMSGGPSASLQRRTREGVR
WPPRPDAYSFHTVIKAFAAAGMWQDAVAMLEGMADEMQRHLRGEEEVLMH
GPAFSAKGVGRWPVDVDRFRRVFQLEIRNNEIVGHERGRMLSSGPSGPSP
EVALRVKAMDVLAEIEREDKEARLRRQALSVASPRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
IPR033443PPR_long