prot_P-fluviatile_contig72.13882.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig72.13882.1
Unique Nameprot_P-fluviatile_contig72.13882.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length251
Homology
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BLAST of mRNA_P-fluviatile_contig72.13882.1 vs. uniprot
Match: A0A6H5KJ01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ01_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 2.020e-52
Identity = 110/218 (50.46%), Postives = 139/218 (63.76%), Query Frame = 0 
Query:   18 VRLILAPL-LLSIAAA----YRQGDIVGMTYNYRSLRA-EEPQESPWEGVLRSQMPRYGRPGKVNFKPGAALPPNTPQHSRDAEEDGLAVAFAFAEERFVLRRVSTRQEGGTGSQKRGRLSKVVITFACAAGDIVTVRSDPVYSDG-------GGVAAEGGXXXXXGTGA---LGFEIEYRWDWLPEEDEQTGVWLVLAASLVLTAVLAADACNGTVE 219
            V L+LA L   SIAAA     R GDIV M+Y  +   + EE +E+PWE  LRSQMPR+GRP  V FKP   LP     HS  A+ D +AV FAF +E+FVLRRV  R+EG +G+++  RL ++V+TFACA G+IV +RSDPVY+         GG++   G      T      GF++EYRWD LPEED Q G+W +L ASLV+TAVLA D CN T E
Sbjct:   11 VELLLAHLSATSIAAAAAAVLRPGDIVSMSYRSKVTGSVEEKREAPWEEALRSQMPRFGRPDTVQFKPN--LPDGGTSHS--ADRDQVAVVFAFFQEQFVLRRVMLREEG-SGNEEGRRLKRLVVTFACAGGEIVKIRSDPVYACRTVVGPLFGGLSKANGDTAATATAGGEDPGFQVEYRWDHLPEEDAQAGLWFLLFASLVVTAVLAVDVCNSTAE 223
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig72.13882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJ01_9PHAE2.020e-5250.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 32..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..251
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 20..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..32
score: 0.67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig72contigP-fluviatile_contig72:476992..479247 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig72.13882.1mRNA_P-fluviatile_contig72.13882.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig72 476992..479292 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig72.13882.1 ID=prot_P-fluviatile_contig72.13882.1|Name=mRNA_P-fluviatile_contig72.13882.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=251bp
MFMICGCCFSRLWSKKAVRLILAPLLLSIAAAYRQGDIVGMTYNYRSLRA
EEPQESPWEGVLRSQMPRYGRPGKVNFKPGAALPPNTPQHSRDAEEDGLA
VAFAFAEERFVLRRVSTRQEGGTGSQKRGRLSKVVITFACAAGDIVTVRS
DPVYSDGGGVAAEGGGGEGGGTGALGFEIEYRWDWLPEEDEQTGVWLVLA
ASLVLTAVLAADACNGTVERETETSGPRVRGLSPQQLPPPYAHRRGSGDG
K
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