prot_P-fluviatile_contig7.13560.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig7.13560.1
Unique Nameprot_P-fluviatile_contig7.13560.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length87
Homology
BLAST of mRNA_P-fluviatile_contig7.13560.1 vs. uniprot
Match: A0A6H5L594_9PHAE (Ribosomal_L23eN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L594_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 2.170e-14
Identity = 40/49 (81.63%), Postives = 42/49 (85.71%), Query Frame = 0
Query:    1 ASKAKQAAKNVRQGSGKRRAKVRTSVHFYRPKTLTKARSPKYTTKAVQR 49
            ASKAK AAKNV +GSGKRRAKVRTSVHF+RPKTLT AR PKY  KAV R
Sbjct:    7 ASKAKLAAKNVLKGSGKRRAKVRTSVHFHRPKTLTHARKPKYPAKAVPR 55          
BLAST of mRNA_P-fluviatile_contig7.13560.1 vs. uniprot
Match: A0A835Z6Z2_9STRA (Ribosomal protein L23/L15e core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z2_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.230e-7
Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    1 ASKAKQAAKNVRQGSGKRRAKVRTSVHFYRPKTLTKARSPKYTTKAV 47
            A+KAK AAK V +G+G ++ KVRT VHFYRPKTLT  R PKY  K+ 
Sbjct:   11 ATKAKAAAKAVTKGTGIKKTKVRTKVHFYRPKTLTHDRKPKYALKST 57          
BLAST of mRNA_P-fluviatile_contig7.13560.1 vs. uniprot
Match: A0A7S4QLV7_9DINO (Hypothetical protein n=3 Tax=Sar TaxID=2698737 RepID=A0A7S4QLV7_9DINO)

HSP 1 Score: 50.4 bits (119), Expect = 1.040e-5
Identity = 27/47 (57.45%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    2 SKAKQAAKNVRQGSGKRRAKVRTSVHFYRPKTLTKARSPKYTTKAVQ 48
            SKAK+A+K +   S K+  KV    HFYRPKTLT +R+PKY  KAVQ
Sbjct:   13 SKAKKASKAMTAPSHKKATKVHNKTHFYRPKTLTLSRTPKYVKKAVQ 59          
BLAST of mRNA_P-fluviatile_contig7.13560.1 vs. uniprot
Match: M4BNJ6_HYAAE (Ribosomal_L23eN domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BNJ6_HYAAE)

HSP 1 Score: 49.7 bits (117), Expect = 3.830e-5
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 0
Query:    9 KNVRQGSGKRRAKVRTSVHFYRPKTLTKARSPKYTTKAV 47
            KNV +GS  +  K+RT VHFYRPKTL  ARSP+Y  KAV
Sbjct:   24 KNVIKGSHGKVLKIRTKVHFYRPKTLRLARSPRYARKAV 62          
BLAST of mRNA_P-fluviatile_contig7.13560.1 vs. uniprot
Match: L8GRL5_ACACA (Ribosomal protein L23, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GRL5_ACACA)

HSP 1 Score: 48.9 bits (115), Expect = 7.720e-5
Identity = 25/50 (50.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    2 SKAKQAAKNVRQGSGKRRAKVRTSVHFYRPKTLTKARSPKYTTKAVQRVS 51
            SKA +  K +++G+ KR  KVRT+VHF+RPKTL   R+PKY  ++V R +
Sbjct:   74 SKALKLQKTIKKGATKRVRKVRTNVHFFRPKTLRLPRNPKYPRRSVPRTN 123          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L594_9PHAE2.170e-1481.63Ribosomal_L23eN domain-containing protein n=2 Tax=... [more]
A0A835Z6Z2_9STRA1.230e-761.70Ribosomal protein L23/L15e core domain-containing ... [more]
A0A7S4QLV7_9DINO1.040e-557.45Hypothetical protein n=3 Tax=Sar TaxID=2698737 Rep... [more]
M4BNJ6_HYAAE3.830e-564.10Ribosomal_L23eN domain-containing protein n=1 Tax=... [more]
L8GRL5_ACACA7.720e-550.00Ribosomal protein L23, putative n=1 Tax=Acanthamoe... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005633Ribosomal protein L23/L25, N-terminalPFAMPF03939Ribosomal_L23eNcoord: 2..48
e-value: 1.0E-12
score: 48.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 19..60
e-value: 1.5E-5
score: 27.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:1699193..1700328 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13560.1mRNA_P-fluviatile_contig7.13560.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig7 1698461..1700328 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig7.13560.1 ID=prot_P-fluviatile_contig7.13560.1|Name=mRNA_P-fluviatile_contig7.13560.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=87bp
ASKAKQAAKNVRQGSGKRRAKVRTSVHFYRPKTLTKARSPKYTTKAVQRV
SGNRHGLTYWFSSRDEDRSRDRARDPDEACSRRSVF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005633Ribosomal_L23/L25_N
IPR012677Nucleotide-bd_a/b_plait_sf