prot_P-fluviatile_contig7.13536.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig7.13536.1
Unique Nameprot_P-fluviatile_contig7.13536.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length181
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig7.13536.1 vs. uniprot
Match: Q8QKV7_ESV1K (Histidine kinase n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QKV7_ESV1K)

HSP 1 Score: 88.2 bits (217), Expect = 4.870e-17
Identity = 47/134 (35.07%), Postives = 81/134 (60.45%), Query Frame = 0 
Query:   30 EYIFHLTKKSDSSKFNQSKNFIVSEVFDTVESAFIPSAITTAFNLFDVSKDEFHELSRLFVIKNNVDLLIYSPLITRD--SREAFEANITRVYGYDIEITNLIDGEFVPSSINSINDSFYNMQYNMFWPIYYRY 161
            E I+    KS S K+  +K  +++++ D + +A  PS +T  FN+F VS ++F   +  +  +N +DLLIYSPL++ +  +++ FE   + V+G+ + +T ++DGE  P  I + NDS      ++ WPIYYRY
Sbjct:   25 ESIYQTLVKSRSDKYELAKAVVITDISDLMVNAVTPSVLTVMFNVFQVSLEDFTLAAETYANRNEIDLLIYSPLVSPNGLTQQEFEEEASNVHGFGVVMTEIVDGELAP--ITNDNDS-----QSVSWPIYYRY 151
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QKV7_ESV1K4.870e-1735.07Histidine kinase n=1 Tax=Ectocarpus siliculosus vi... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:1337122..1337664 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13536.1mRNA_P-fluviatile_contig7.13536.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig7 1335520..1337941 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig7.13536.1 ID=prot_P-fluviatile_contig7.13536.1|Name=mRNA_P-fluviatile_contig7.13536.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=181bp
MKRQMPNRKIWPYSVAIFTLLSAISIGSVEYIFHLTKKSDSSKFNQSKNF
IVSEVFDTVESAFIPSAITTAFNLFDVSKDEFHELSRLFVIKNNVDLLIY
SPLITRDSREAFEANITRVYGYDIEITNLIDGEFVPSSINSINDSFYNMQ
YNMFWPIYYRYQNLGELQKDWDWWWQMPAL*
back to top