prot_P-fluviatile_contig63.13006.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig63.13006.1
Unique Nameprot_P-fluviatile_contig63.13006.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length433
Homology
BLAST of mRNA_P-fluviatile_contig63.13006.1 vs. uniprot
Match: D7FVI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI5_ECTSI)

HSP 1 Score: 457 bits (1175), Expect = 1.040e-154
Identity = 239/328 (72.87%), Postives = 275/328 (83.84%), Query Frame = 0
Query:    1 EGLTADEVERRLISAGVLREDGAEIDVDDLDGEGDGRGVFNEIEVSDGEEACRILEERLGFKEEGLAYLQSKYPPLRGELWYRREPSLGDGKPGQKYLDVFFLEETLPDLLDLLLEEEVEEREGRGGGGVGLTPEQVRDMLTHTPALLGVEASDARNVVNYLRCELGLRGGGRLASALAGCPPMLMYNTWDNLRKK-----------VSYYREALAWTNEDVASMLPLYPNFLSIKMENDVIEVIDYLRTEMGLQPFVVAAMVREFPQLLEVRPKRLKTLVRYLLKVLDIPKTGIAVLLSKHPHACSLEAEANLAPLRQFFERELFVE 317
            EGL+ADEVE+RLI+AG+LR DGAEID ++ DG   G GV+NEIEVSDGEEAC+ILEERLGF EEG+A+L+SKYPPLRGELWYRREP+ G  K G+K+LDV+F+EETLPDLLDLLL EE E      GGGVGL  +QVR+MLT TP+L+G++ SDA++V  YLR ELGL G G+LASALAGCPPMLMY+TWDNLR K           VSYYRE+LAWTNEDVA+ML  YPN LSIKMENDVIEVIDYLRTE+GLQP  V+ MVREFPQ+LEVRPKRLK +VRY  KVL+IP++GIAVLLS+HP  C LEAEANLAPLRQFFERELFVE
Sbjct:  154 EGLSADEVEQRLIAAGILRGDGAEIDFEEDDG--GGAGVYNEIEVSDGEEACQILEERLGFDEEGIAHLRSKYPPLRGELWYRREPASGGSKTGKKFLDVYFVEETLPDLLDLLLGEEGE------GGGVGLDRKQVREMLTTTPSLVGMDVSDAKDVAGYLRSELGLSGKGQLASALAGCPPMLMYHTWDNLRMKYDNNDDGDDDQVSYYRESLAWTNEDVAAMLAEYPNLLSIKMENDVIEVIDYLRTEVGLQPLTVSGMVREFPQVLEVRPKRLKAVVRYFWKVLEIPRSGIAVLLSQHPRTCCLEAEANLAPLRQFFERELFVE 473          
BLAST of mRNA_P-fluviatile_contig63.13006.1 vs. uniprot
Match: A0A6H5JYV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYV1_9PHAE)

HSP 1 Score: 391 bits (1004), Expect = 1.940e-127
Identity = 232/389 (59.64%), Postives = 262/389 (67.35%), Query Frame = 0
Query:    1 EGLTADEVERRLISAGVLREDGAEIDVD-DLDGEGDGRGVFNEIEVSDGEEACRILEERLGFKEEGLAYLQSKYPPLRGELWYRREPSLGDGKPGQKYLDVFFLEETLPDLLDLLLEEEVEEREGRGGGGVGLTPEQVRDMLTHTPALLGVEASDARNVVNYLRCELGLRGGGRLASALAGCPPMLMYNTWDNLRKKVSYYREALAWTNEDVASMLPLYPNFLSIKMENDVIEVIDYLRTEMGLQPFVVAAMVREFPQLLEVRPKRLKTLVRY------------------LLKVLDIPKTGIAVLLSKHPHACSLEAEANLAPLRQFFERELFVEDTARIGHLVYKFPRLLFKDVETQLLPRAEEFRKAMGLEGLKPLAPRDRLRPKR 370
            EGL+ADEVERRLI+AG+LR DGAEID D D DGE    GV+NEIEVSDGEEACRILEERLGF EEG+ YL+SKYPPLRGELWYRREP+ G  K G+K+LDV+F+EETLPDLLDLLL EE E      GGG+GL  +Q R      PA       D+ +   +                            W ++   VSYYREALAWT+EDVA+ML  YPN LSIKMENDVIEVID                        EVRPKRLK +VR                   L  VL+IP++GIAVLLS+HP AC LEAEANLAPLRQFFERELFVEDT+RIGHLVYKFPRLLF+DV+TQL+PRAEEFRKAMGLEGL+PL PR RLRPKR
Sbjct:  230 EGLSADEVERRLIAAGILRGDGAEIDFDEDDDGEA---GVYNEIEVSDGEEACRILEERLGFDEEGIGYLRSKYPPLRGELWYRREPASGGSKTGKKFLDVYFVEETLPDLLDLLLGEEGE------GGGIGLDRKQARG-----PA-------DSSHSEQF----------------------------WGDVDADVSYYREALAWTSEDVAAMLAEYPNLLSIKMENDVIEVIDXXXXXXXXXXXXXXXXXXXXXXXXEVRPKRLKAVVRKKGTELELQAFESKEVLGTLSSVLEIPRSGIAVLLSQHPRACCLEAEANLAPLRQFFERELFVEDTSRIGHLVYKFPRLLFQDVDTQLVPRAEEFRKAMGLEGLEPLPPRVRLRPKR 569          
BLAST of mRNA_P-fluviatile_contig63.13006.1 vs. uniprot
Match: A0A835YN67_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN67_9STRA)

HSP 1 Score: 160 bits (406), Expect = 6.560e-41
Identity = 119/360 (33.06%), Postives = 175/360 (48.61%), Query Frame = 0
Query:   48 GEEACRILEERLGFKEEGLAYLQSKYPPLRGELWYRREPSLGDGKPGQKYLDVFFLEETLPDLLDLLLEEEVEEREGRGGGGVGLTPEQVRDMLTHTPALLGVEASDARNVVNYLRCELGLRGGGRLASALAGCPPMLMYNTWDNLRKKVSYYREALAWTNEDVASMLPLYPNFLSIKMEND---VIEVIDYLRTEMGLQPFVVAAMVREFPQLL-EVRPKRLKTLVRYLLK------------------------------------VLDIPKTGIAVLLSKHPHACSLEAEANLAPLRQFFERELFVEDTARIGHLVYKFPRLLFKDVETQLLPRAEEFRKAMGLEG----LKPLAPR 363
            G EA R L E +G     +A L  ++ PLRGE+WYRR       + G+K LDV+FLE+TLPDL++LL  E  EE        +G + E++       P+LLG EA++    + Y+R E     GG L  AL+ CP +L+Y+   NLR K +Y    L  T   +  ++  YP    +    +    I  +D L  + G+   +   +V   P+L+ E + KR+K L+ YL K                                    VL +       L+  HP    +EAE +LAPLR FFE +L + DT RIG +V K P++LF D+ET+L P+A + R  +G+       +P APR
Sbjct:   62 GAEAQRFLIEDVGLAPAAVAALAERFAPLRGEMWYRR-------RNGKKVLDVYFLEDTLPDLVELL--EAPEE--------LGWSQEEMAAAFAVVPSLLGREAAEVAASLRYVR-EXXXXEGGELRGALSACPSLLLYDARTNLRAKHAYLTRHLGLTPAQLRELMLKYPRMFDVAFTGEGKSSIASLDVL-LDSGMTTHMACQLVVAEPELVAEAKGKRVKALMHYLQKWRRLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLKLEPEVATRLVCSHPRLLGMEAEKDLAPLRHFFEYDLCITDTRRIGSIVAKLPQILFMDLETELRPKAADIRAKLGIPDDAAPPRPRAPR 402          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig63.13006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVI5_ECTSI1.040e-15472.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYV1_9PHAE1.940e-12759.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YN67_9STRA6.560e-4133.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 175..207
e-value: 520.0
score: 6.1
coord: 249..280
e-value: 0.13
score: 21.4
coord: 138..169
e-value: 44.0
score: 13.0
coord: 323..355
e-value: 0.049
score: 22.8
coord: 212..244
e-value: 0.14
score: 21.3
coord: 285..316
e-value: 2300.0
score: 1.1
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 174..349
e-value: 5.8E-13
score: 48.4
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 128..250
e-value: 9.5E-14
score: 53.2
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 188..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig63contigP-fluviatile_contig63:588712..596635 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig63.13006.1mRNA_P-fluviatile_contig63.13006.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig63 588712..596635 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig63.13006.1 ID=prot_P-fluviatile_contig63.13006.1|Name=mRNA_P-fluviatile_contig63.13006.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=433bp
EGLTADEVERRLISAGVLREDGAEIDVDDLDGEGDGRGVFNEIEVSDGEE
ACRILEERLGFKEEGLAYLQSKYPPLRGELWYRREPSLGDGKPGQKYLDV
FFLEETLPDLLDLLLEEEVEEREGRGGGGVGLTPEQVRDMLTHTPALLGV
EASDARNVVNYLRCELGLRGGGRLASALAGCPPMLMYNTWDNLRKKVSYY
REALAWTNEDVASMLPLYPNFLSIKMENDVIEVIDYLRTEMGLQPFVVAA
MVREFPQLLEVRPKRLKTLVRYLLKVLDIPKTGIAVLLSKHPHACSLEAE
ANLAPLRQFFERELFVEDTARIGHLVYKFPRLLFKDVETQLLPRAEEFRK
AMGLEGLKPLAPRDRLRPKRYGSFTAEDDGEGGDGRRSGGGRGGGRGRRS
GSGRFRSNDSSGGSSGRMGGRGARSGAGRARSA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf