mRNA_P-fluviatile_contig63.13006.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig63.13006.1
Unique NamemRNA_P-fluviatile_contig63.13006.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig63.13006.1 vs. uniprot
Match: D7FVI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI5_ECTSI)

HSP 1 Score: 457 bits (1175), Expect = 1.040e-154
Identity = 239/328 (72.87%), Postives = 275/328 (83.84%), Query Frame = 1 
Query:    1 EGLTADEVERRLISAGVLREDGAEIDVDDLDGEGDGRGVFNEIEVSDGEEACRILEERLGFKEEGLAYLQSKYPPLRGELWYRREPSLGDGKPGQKYLDVFFLEETLPDLLDLLLEEEVEEREGRGGGGVGLTPEQVRDMLTHTPALLGVEASDARNVVNYLRCELGLRGGGRLASALAGCPPMLMYNTWDNLRKK-----------VSYYREALAWTNEDVASMLPLYPNFLSIKMENDVIEVIDYLRTEMGLQPFVVAAMVREFPQLLEVRPKRLKTLVRYLLKVLDIPKTGIAVLLSKHPHACSLEAEANLAPLRQFFERELFVE 951
            EGL+ADEVE+RLI+AG+LR DGAEID ++ DG   G GV+NEIEVSDGEEAC+ILEERLGF EEG+A+L+SKYPPLRGELWYRREP+ G  K G+K+LDV+F+EETLPDLLDLLL EE E      GGGVGL  +QVR+MLT TP+L+G++ SDA++V  YLR ELGL G G+LASALAGCPPMLMY+TWDNLR K           VSYYRE+LAWTNEDVA+ML  YPN LSIKMENDVIEVIDYLRTE+GLQP  V+ MVREFPQ+LEVRPKRLK +VRY  KVL+IP++GIAVLLS+HP  C LEAEANLAPLRQFFERELFVE
Sbjct:  154 EGLSADEVEQRLIAAGILRGDGAEIDFEEDDG--GGAGVYNEIEVSDGEEACQILEERLGFDEEGIAHLRSKYPPLRGELWYRREPASGGSKTGKKFLDVYFVEETLPDLLDLLLGEEGE------GGGVGLDRKQVREMLTTTPSLVGMDVSDAKDVAGYLRSELGLSGKGQLASALAGCPPMLMYHTWDNLRMKYDNNDDGDDDQVSYYRESLAWTNEDVAAMLAEYPNLLSIKMENDVIEVIDYLRTEVGLQPLTVSGMVREFPQVLEVRPKRLKAVVRYFWKVLEIPRSGIAVLLSQHPRTCCLEAEANLAPLRQFFERELFVE 473
[Close]
BLAST of mRNA_P-fluviatile_contig63.13006.1 vs. uniprot
Match: A0A6H5JYV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYV1_9PHAE)

HSP 1 Score: 391 bits (1004), Expect = 1.940e-127
Identity = 232/389 (59.64%), Postives = 262/389 (67.35%), Query Frame = 1 
Query:    1 EGLTADEVERRLISAGVLREDGAEIDVD-DLDGEGDGRGVFNEIEVSDGEEACRILEERLGFKEEGLAYLQSKYPPLRGELWYRREPSLGDGKPGQKYLDVFFLEETLPDLLDLLLEEEVEEREGRGGGGVGLTPEQVRDMLTHTPALLGVEASDARNVVNYLRCELGLRGGGRLASALAGCPPMLMYNTWDNLRKKVSYYREALAWTNEDVASMLPLYPNFLSIKMENDVIEVIDYLRTEMGLQPFVVAAMVREFPQLLEVRPKRLKTLVRY------------------LLKVLDIPKTGIAVLLSKHPHACSLEAEANLAPLRQFFERELFVEDTARIGHLVYKFPRLLFKDVETQLLPRAEEFRKAMGLEGLKPLAPRDRLRPKR 1110
            EGL+ADEVERRLI+AG+LR DGAEID D D DGE    GV+NEIEVSDGEEACRILEERLGF EEG+ YL+SKYPPLRGELWYRREP+ G  K G+K+LDV+F+EETLPDLLDLLL EE E      GGG+GL  +Q R      PA       D+ +   +                            W ++   VSYYREALAWT+EDVA+ML  YPN LSIKMENDVIEVID                        EVRPKRLK +VR                   L  VL+IP++GIAVLLS+HP AC LEAEANLAPLRQFFERELFVEDT+RIGHLVYKFPRLLF+DV+TQL+PRAEEFRKAMGLEGL+PL PR RLRPKR
Sbjct:  230 EGLSADEVERRLIAAGILRGDGAEIDFDEDDDGEA---GVYNEIEVSDGEEACRILEERLGFDEEGIGYLRSKYPPLRGELWYRREPASGGSKTGKKFLDVYFVEETLPDLLDLLLGEEGE------GGGIGLDRKQARG-----PA-------DSSHSEQF----------------------------WGDVDADVSYYREALAWTSEDVAAMLAEYPNLLSIKMENDVIEVIDXXXXXXXXXXXXXXXXXXXXXXXXEVRPKRLKAVVRKKGTELELQAFESKEVLGTLSSVLEIPRSGIAVLLSQHPRACCLEAEANLAPLRQFFERELFVEDTSRIGHLVYKFPRLLFQDVDTQLVPRAEEFRKAMGLEGLEPLPPRVRLRPKR 569
[Close]
BLAST of mRNA_P-fluviatile_contig63.13006.1 vs. uniprot
Match: A0A835YN67_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN67_9STRA)

HSP 1 Score: 160 bits (406), Expect = 6.560e-41
Identity = 119/360 (33.06%), Postives = 175/360 (48.61%), Query Frame = 1 
Query:  142 GEEACRILEERLGFKEEGLAYLQSKYPPLRGELWYRREPSLGDGKPGQKYLDVFFLEETLPDLLDLLLEEEVEEREGRGGGGVGLTPEQVRDMLTHTPALLGVEASDARNVVNYLRCELGLRGGGRLASALAGCPPMLMYNTWDNLRKKVSYYREALAWTNEDVASMLPLYPNFLSIKMEND---VIEVIDYLRTEMGLQPFVVAAMVREFPQLL-EVRPKRLKTLVRYLLK------------------------------------VLDIPKTGIAVLLSKHPHACSLEAEANLAPLRQFFERELFVEDTARIGHLVYKFPRLLFKDVETQLLPRAEEFRKAMGLEG----LKPLAPR 1089
            G EA R L E +G     +A L  ++ PLRGE+WYRR       + G+K LDV+FLE+TLPDL++LL  E  EE        +G + E++       P+LLG EA++    + Y+R E     GG L  AL+ CP +L+Y+   NLR K +Y    L  T   +  ++  YP    +    +    I  +D L  + G+   +   +V   P+L+ E + KR+K L+ YL K                                    VL +       L+  HP    +EAE +LAPLR FFE +L + DT RIG +V K P++LF D+ET+L P+A + R  +G+       +P APR
Sbjct:   62 GAEAQRFLIEDVGLAPAAVAALAERFAPLRGEMWYRR-------RNGKKVLDVYFLEDTLPDLVELL--EAPEE--------LGWSQEEMAAAFAVVPSLLGREAAEVAASLRYVR-EXXXXEGGELRGALSACPSLLLYDARTNLRAKHAYLTRHLGLTPAQLRELMLKYPRMFDVAFTGEGKSSIASLDVL-LDSGMTTHMACQLVVAEPELVAEAKGKRVKALMHYLQKWRRLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLKLEPEVATRLVCSHPRLLGMEAEKDLAPLRHFFEYDLCITDTRRIGSIVAKLPQILFMDLETELRPKAADIRAKLGIPDDAAPPRPRAPR 402
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig63.13006.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVI5_ECTSI1.040e-15472.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYV1_9PHAE1.940e-12759.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YN67_9STRA6.560e-4133.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig63contigP-fluviatile_contig63:588712..596635 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons9
Model size1301
Cds size1299
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817047.4760528-CDS-P-fluviatile_contig63:588711..5887321622817047.4760528-CDS-P-fluviatile_contig63:588711..588732Porterinema fluviatile SAG_2381CDSP-fluviatile_contig63 588712..588732 +
1693570932.4897094-CDS-P-fluviatile_contig63:588711..5887321693570932.4897094-CDS-P-fluviatile_contig63:588711..588732Porterinema fluviatile SAG_2381CDSP-fluviatile_contig63 588712..588732 +
1622817047.4866316-CDS-P-fluviatile_contig63:589132..5893001622817047.4866316-CDS-P-fluviatile_contig63:589132..589300Porterinema fluviatile SAG_2381CDSP-fluviatile_contig63 589133..589300 +
1693570932.49899-CDS-P-fluviatile_contig63:589132..5893001693570932.49899-CDS-P-fluviatile_contig63:589132..589300Porterinema fluviatile SAG_2381CDSP-fluviatile_contig63 589133..589300 +
1622817047.498956-CDS-P-fluviatile_contig63:590436..5906551622817047.498956-CDS-P-fluviatile_contig63:590436..590655Porterinema fluviatile SAG_2381CDSP-fluviatile_contig63 590437..590655 +
1693570932.5095627-CDS-P-fluviatile_contig63:590436..5906551693570932.5095627-CDS-P-fluviatile_contig63:590436..590655Porterinema fluviatile SAG_2381CDSP-fluviatile_contig63 590437..590655 +
1622817047.510348-CDS-P-fluviatile_contig63:591544..5917241622817047.510348-CDS-P-fluviatile_contig63:591544..591724Porterinema fluviatile SAG_2381CDSP-fluviatile_contig63 591545..591724 +
1693570932.5230553-CDS-P-fluviatile_contig63:591544..5917241693570932.5230553-CDS-P-fluviatile_contig63:591544..591724Porterinema fluviatile SAG_2381CDSP-fluviatile_contig63 591545..591724 +
1622817047.5240545-CDS-P-fluviatile_contig63:592258..5923831622817047.5240545-CDS-P-fluviatile_contig63:592258..592383Porterinema fluviatile SAG_2381CDSP-fluviatile_contig63 592259..592383 +
1693570932.5389578-CDS-P-fluviatile_contig63:592258..5923831693570932.5389578-CDS-P-fluviatile_contig63:592258..592383Porterinema fluviatile SAG_2381CDSP-fluviatile_contig63 592259..592383 +
1622817047.5345926-CDS-P-fluviatile_contig63:593581..5936931622817047.5345926-CDS-P-fluviatile_contig63:593581..593693Porterinema fluviatile SAG_2381CDSP-fluviatile_contig63 593582..593693 +
1693570932.5482988-CDS-P-fluviatile_contig63:593581..5936931693570932.5482988-CDS-P-fluviatile_contig63:593581..593693Porterinema fluviatile SAG_2381CDSP-fluviatile_contig63 593582..593693 +
1622817047.5469398-CDS-P-fluviatile_contig63:594643..5947691622817047.5469398-CDS-P-fluviatile_contig63:594643..594769Porterinema fluviatile SAG_2381CDSP-fluviatile_contig63 594644..594769 +
1693570932.5572999-CDS-P-fluviatile_contig63:594643..5947691693570932.5572999-CDS-P-fluviatile_contig63:594643..594769Porterinema fluviatile SAG_2381CDSP-fluviatile_contig63 594644..594769 +
1622817047.5575864-CDS-P-fluviatile_contig63:595521..5956201622817047.5575864-CDS-P-fluviatile_contig63:595521..595620Porterinema fluviatile SAG_2381CDSP-fluviatile_contig63 595522..595620 +
1693570932.5667725-CDS-P-fluviatile_contig63:595521..5956201693570932.5667725-CDS-P-fluviatile_contig63:595521..595620Porterinema fluviatile SAG_2381CDSP-fluviatile_contig63 595522..595620 +
1622817047.5687158-CDS-P-fluviatile_contig63:596386..5966351622817047.5687158-CDS-P-fluviatile_contig63:596386..596635Porterinema fluviatile SAG_2381CDSP-fluviatile_contig63 596387..596635 +
1693570932.5796244-CDS-P-fluviatile_contig63:596386..5966351693570932.5796244-CDS-P-fluviatile_contig63:596386..596635Porterinema fluviatile SAG_2381CDSP-fluviatile_contig63 596387..596635 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig63.13006.1prot_P-fluviatile_contig63.13006.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig63 588712..596635 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig63.13006.1

>prot_P-fluviatile_contig63.13006.1 ID=prot_P-fluviatile_contig63.13006.1|Name=mRNA_P-fluviatile_contig63.13006.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=433bp
EGLTADEVERRLISAGVLREDGAEIDVDDLDGEGDGRGVFNEIEVSDGEE
ACRILEERLGFKEEGLAYLQSKYPPLRGELWYRREPSLGDGKPGQKYLDV
FFLEETLPDLLDLLLEEEVEEREGRGGGGVGLTPEQVRDMLTHTPALLGV
EASDARNVVNYLRCELGLRGGGRLASALAGCPPMLMYNTWDNLRKKVSYY
REALAWTNEDVASMLPLYPNFLSIKMENDVIEVIDYLRTEMGLQPFVVAA
MVREFPQLLEVRPKRLKTLVRYLLKVLDIPKTGIAVLLSKHPHACSLEAE
ANLAPLRQFFERELFVEDTARIGHLVYKFPRLLFKDVETQLLPRAEEFRK
AMGLEGLKPLAPRDRLRPKRYGSFTAEDDGEGGDGRRSGGGRGGGRGRRS
GSGRFRSNDSSGGSSGRMGGRGARSGAGRARSA
back to top

mRNA from alignment at P-fluviatile_contig63:588712..596635+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig63.13006.1 ID=mRNA_P-fluviatile_contig63.13006.1|Name=mRNA_P-fluviatile_contig63.13006.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7924bp|location=Sequence derived from alignment at P-fluviatile_contig63:588712..596635+ (Porterinema fluviatile SAG_2381)
GAAGGGCTCACGGCAGATGAGGTATGCTATCGCAGCGCCAGTGTTATTTC
TGTCTCGCAGCGATTCAACGGTTGCCGGCCCGTTGGAGGAACTCCACCTT
TTAACGAGGGTTCCCCCCTGCAAGCGGCAATTCAACATCACCTCCCCCGA
CCAGAGTGTCCGCCGGTTTCCGGGGAAAAGCAACCTTGCCCCATTCGAAG
ACTACCTTCGTATGTCACTATTCTCCACACTCATGCTCCGATCATGGCCG
TGGGGGCGTGTTTTGCTTCAGCATTATCATTGGAACAATATCTACTTCCG
CCTCACCCGCCCGACCGCTTGGACCCCGATCAGGAAGCCACACTGCCTGA
ACTATTGAGCAGCAGCGGCAAACGAGAAAAAAGCAATATTCTCCACACGT
TGTCCCGCGCGGCCTGCCCAGGTGGAACGGAGGCTAATCAGCGCCGGGGT
GCTGAGAGAGGACGGCGCCGAAATCGACGTGGACGACCTCGACGGAGAAG
GGGATGGACGCGGAGTGTTCAACGAAATCGAGGTTTCCGACGGAGAGGAG
GCCTGTCGTATATTGGAGGAGCGGCTCGGCTTCAAAGAGGTAGGTCAGCG
CGGTCTCTCTCCGTTGACTTATTTCTATCTCCGTCAACAACAGAGGACGA
AATTCACTGTACTTGCACAATGAACGTTTTTTCGCACACCTCGATCCCAC
TTTCCAACTTTGGAGCTTTTCCGGAGCCGAAAGGGGGGTACCTCAAATAT
CTCAATTATATGAGGGGATCCTTCGTGGTGTTTCCGCCGGAGAGGAGGCT
TTTCGCACGAAGGACCGCCCCCGGCTTTGAACAGGTAGTCCAGCGCTGTA
TCTCCCCGTTCACTCGCTCCTCTCTCCGTCAACAGCGAAAAATAGAAGGA
TTCTTTTTGCAAGCCTTAAGGTCTGGTTTCTTCATTTTTAAGCGTTTCGG
GCGAAAGCTTACCTGTTCTCTACTTAACTTTGAAGGTGAGGGGGGACGGG
GGTGTTTCCGATTGAGCGGAGACGTGCCGCCTCGTGGAGAACCGCCTAGG
GTGTGATGAGGTGGTAGGTCAGCGAGGCATCCTTTGATTCCCTCCCCCCC
TTGCAAGGAAGACAACATGGAAAATTAAATTGCATTGGTATTGGTTATGC
ATTGGTAGCGGCTACCAACACGGTATGCATCCGAAACATTGATATTCACA
TCGATCAAGTCGTGGGAAGACTGGGTTGTGGGTCGCATCTATCTACTGAT
GCCACGTTCTCCGAAGTGAAAATCGTTTGGCACTCAAGGTAGAGTCCTCC
CACAACCCCCCACAAGAATTCACCATCGATCACCGCTGAAGGGGCATCGC
CCACATGCGAACCAAGTACCTTCCACGACATGCGACGGAATAGTGGTGCC
GTCGACGTGCGCGTCAAAGTACTTGTTGTTTACCGCATCTTTATCTGCTC
GGACCACCATACCAAGGGCGCTGCTGGCCCACTCACGTCCCTCGGTCTTC
CCCAAACCTGCTCTCACACGCTCTGTTCCCCCGAATAAGAATTCCATTAC
CGCACGAGGGCATCGCCTACATACAGCACAAACACCGCTCTGTCCTCAGA
GAGCTTTGGTACGGCAGGGAGCCGTCATCGGGGGTACCTGTTTCACAAAA
TCATACTCACGcccctCCCCCCCTCCCCCCCTCCCCTCCTCTCCCGCTTT
CCCCGaAAAAATTACTCAACCGCAGGAGGGCTTAGCCTACCTGCAGAGCA
AGTACCCCCCCCTCCGCGGGGAACTCTGGTACCGTAGGGAACCCTCGTTG
GGGGATGGAAAGCCCGGGCAGAAATATTTGGACGTCTTCTTCCTGGAGGA
GACCCTTCCGGACCTCCTGGACCTGCTCCTGGAAGAGGAAGTAGAGGAAC
GGGAAGGACGCGGCGGGGGCGGCGTTGGTCTGACCCCCGAGCAGGTGGGG
CTGGGGCTGGAATAAAGGGGGGGGTACTCATAGTCGTGCATGCCGTAGTC
GTTAGACCATTGACCTCGCATCCCTACAAAGCCGGGACGGAGCACGCCGG
GTTCTCACCGGACCAGGCTCTCACACCACCAAGCGCCGTGAGGTATTCGG
CGAGTCGCATGAAGGGTGCGCTGCATCCTGCTTAGGGTGTTCGGCATCTT
GTGCTTACTTCCTTGCATACGGATGACAGCTGCGTATGGCTTAATTTATT
TTCTGGTGCTTTCACTTCCAGAGACAGTTGTAAGCACTGTGTAACTGCCT
CGAGGGTGCTTGACCATTGTAACACAACGTGGTGCGATCATCCCCCTTGC
GCGGAGTGAGGGTTCTCCAcCCCCGCACAACATGATCTTCTTGACCACCA
TTATGGTTACCGCCAAAAAAACCAGAGGAAAAAAAAAGGCGGTAACCTGG
TTGCCGAGTTCACGAAGTGAATTGGCTTGTTTTACAACGTCGTTGCCAAG
CGACGAAAACCCAATCCCGATGGCAAACATCGAGGTGAGAGCCAGCGGGA
GGGGATGGGACGAGCGAGGGGGGGAATAAAAGGGGGGGAAGGGGGGAAGA
CAAATGGGAAGAGGGTAGAAATTACGGAGCAGGGTCTTATTGGGGAAAAG
GTCAGACGGCAGGGGGAGGGAGGGGGCTACCCTCGCCTTGTGGGGTTGGT
CGAGGTGCTACCGGCCGCGTGGGTTGGATAGGATTTGCCTCCTAACTGcc
cCCCCCCCTCACCCGGATTTCCAGGCCTACTCCCCGCCCCCCGCCTCCCC
TTCCTCCTTCCCCGCCCACGCGGGGCGATTCCCTGACCCGCGCGCTACCC
CCCTCTGATTTCTCCCACATCATTTTTGCTGAGGTACGGGACATGCTGAC
CCACACTCCCGCTCTGTTGGGGGTGGAAGCTTCGGACGCCCGAAACGTCG
TGAACTACCTCCGCTGCGAGCTGGGCCTGCGTGGCGGCGGCCGGCTTGCC
TCCGCGCTCGCCGGGTGCCCCCCAATGCTCATGTACAACACTTGGGACAA
CCTGCGCAAGAAGGCGAGATAGCAGCCCGTCTGCCGACGCCCTGTTTTTT
TTTTGTTTCGCGGGAGGGCGGGATGGGGGGCGGCAGAGTGCGTACATGTG
TTTGGGCGGGGTGTGCTCATTTCGGTTGACCGAAGACCGCGCATCTCTTC
AAGGTGGAAGTGAAGGCTTTCAGGGGAAGAAAAGGGAGGAGAAGCGGGTG
GGAGGAGAAGCGGATGGGAGGAGAAGCGAAgGGAGAGCAACGTGTGAGAT
TGCTTGGGCGCTTGCTGGATCTAAGGTGTGTGTTCACCACCGCGAATAGG
TGAGGGGACCTATGAGCATTGAAAATCGCGACGAGACGGGAGGGATCGTT
GTCGCGAGCTCTGTTGACATGGGGAGATTCTTCATTCGGGCGCGAGCAGG
AGCTTGTCTCGCCTGTCCAGATGGAGCGAGTGCGCGAACAGCCGTTTTTC
ATCCCTTCGCTCCGCCCCTAAATCCTCCTGCCCCCTGACCCTCCTCGCCT
GCCGCCCCGTCGTGATCCAATGGTACCCTATTTCTGGTTGTGATCAGGTG
TCGTACTATCGCGAAGCACTGGCGTGGACAAATGAGGACGTTGCTTCGAT
GCTTCCCCTGTACCCGAACTTCTTGTCCATCAAGATGGAGAATGACGTCA
TCGAGGTCATCGACTACCTCAGGTTGGGATTTTTTTTTACTACCCTTTTG
CGCAGGGGCCCAGAATTCGTTTTATCATAAATCAGCAGCACCTATCCTAT
TTTTTTTTTTTCGAACTTAATAACCCAAGTTTAGGGTTCGCAGATTTCCT
AAGAGTTGTGGCGATGAGAAGCTGTACGGCATCTGCTCCTCTTGCGTAAG
TTTGGAGGGTAGCGAATCAGGACGACGGAAAGGGTGAAAGTGACGAGGCG
ATATTATTGACCATTTTCAGGGTAAAATAGTACTCCGGAGTAAGTGAAAA
TATGGGACGGAGGGAAAAAAAATGTTTCAAGTGTTGCTCTCTGTGGTGTG
TATCGTTGGGTGACTTGTCGTAAGGCAACGGATGTAATACCAGTTTACTT
CGTATAGTGCAATTCACGCGTACTTTTTCATTCAGACAAAAACAATCATT
TTTCGAGCCTGCGATCACTGTTAGGCGAGGCAACCCCACTTCACCTGCAA
GAAATCTGGAACAATTTTCCGTCGATAGACCGCGAGTGCTCTAGGCACCA
GAACAGCCGAGCACGCGGATAAGGCGGGGAGGAGGCGCGCGAATTTCGCC
CTCCTAATGTCATGAGCCACTTTGGTTCGTGGCTTAAGAGTCGGGGCCTT
CCGCGAGATACACGCCTTCGTATCATCCCTCCGACCCGCGTACTATCCGG
TAGCCTTCGCATGAATGGAAAAAATAAAAGCTTATTATTTGTACGAATTT
GCGGGGAATTTGGGTAGGGTTAGGGCTGCAGTTGCACAAACATCCGCTGC
GTATTTCCTATATGTCTTGAACTTCCCGCGTAGACGGTCCCTCCCATTGT
TGCATGTACGCGCAGGCAACATCTCCCCAGCCTGTCGGCGACGGAATACA
ATATGTACCGGGTCATGGCGAATGCCACGCCGATGAAGGCATCTGACGGG
AGCTGCGGAAAATGATTTGGCCTAAAATCCTTCCGGCAGTAATTCGACAC
TCCAACTACGCGATGACAACAGTTAGAGTGGTCGACGTAACCGCGATTGA
TTGAAATATGTCCGTGATCTCTTGTTTTACAACGTTTTCTGCCTTCTAGC
GGGGAGATTAGAATTTCTAGCCCCTGCAGCTCGGCAAGCGTTTCACTGAT
GTGAATACCTTGGGCTTCTCCCCCTCCCTCCCTCGTGTTTGCTCCTGGGC
CACTGCCCTTTCCACGGAAGGACGGAGATGGGCCTCCAGCCCTTTGTGGT
TGCGGCGATGGTGAGGGAGTTCCCGCAGCTTCTGGAGGTTCGGCCGAAGC
GTCTGAAGACGCTGGTCAGGTATCTCTTGAAGGTGTGACCAAAAAGAGGG
AAATGCAGAGAAACGGGAGGGAGGAAGCGGCGGGACGGAGGGGGGGAGAG
CGAGAACGACAGAGACAGGGCGAAATATTGAAAAAATGATAACGCAGAGA
CGGAGACAGGAAGGGATGCACCACCCATGGCAGCTCTCGCATGGATACAC
TTTGATTTTGGCGAGCTTTCTGCTGTTTGATTTGCCATCGCATCTGATAC
CCGGAAACAGTTCAGATGTTGAGAGTTGACCGACCTCGCATTGGGAAGAA
CGATCTCCTTAGTTCTTACCGCATTTGTCCTCAGCTTGTCCACCCACGAT
GGCACCTCAGTGCTGCGTGTAGTTCACTCGACCCACGTTGTGTGAAGTGG
ATGGAGCGTTAACACACATCGCTTGGGGGCACAGAGCACAATTTCTCTCT
GAACGGTAACCTCCCAATGCGCGTACGTGGCCTACCCGCCTGCCCGTTTC
GGCTAGCTTCCAGCCCCCTCTCCCGAAATGCGTTATCGCTGCTTGGCAAC
AGCGGAATTAAAAGTCTTCATGGCCTCCCGTCCCCCCTTTCTTTCTGCCT
CCGGAAAAGCCACCCTCACCCAAGATGTTGGACATTTCGAAGACTGCTGA
TCAAACATCCTCTCTCTCTGTCTCTCGTTCTTTCTAGATGCGAGGTATGT
GTTCCAGTAACGGTGGCTGCATGGGAGGAATAGTATGCTAGGATCGACGC
CTTCCGCACCCACCCTCCGAGCACCGAAATCATTACTCTTGCTCAAGGTG
TGGACATTCCGACAACCGGAGCCGCCCCTATGCTGATCAAACACACTCTC
CGTTTGTCTCTCTCTCTGTCTCTGAGCACGCGAGTACCGTATTTGCGACG
GCGGCTCGAAAGAATTCGATACTTATGATCGAAGCGTCGTCAACCGTCCG
CCGCGCCCCGGAACTGCAACCCTCAAACCAAGGTGTTGGACATCCCGAAA
ACCGGAATCGCCGTCCTGCTCAGCAAGCATCCTCATGCCTGCAGCCTGGA
GGCCGAGGCCAACCTCGCCCCGCTGAGGCAGTTCTTCGAGAGAGAGCTCT
TCGTAGAAGTGAGCGAGCCGATGGGGGAAAGGCGTGGCTCAGCTTGGGTT
GCCTCGACTTGATGCTCTTTGCTCGTGTTTTCCGATTTGGGTGGTAACTG
TGCGACGGAACCTTCTTAGCGCTGCTTCTGGCATAGTACTGGTTGTGAGT
TGCCGGTGTCGTTGTTGTTGCTGCTGCCCCCGCTACACTTGGTGGTGGTG
GTGCTGCTGCTTTTGTTGTGGATGCTTTTCTTGATCGCTGGACTCCTGCC
CTGTCGTTATGGTGGTGTGAGCCGAGCTCTCTTTCGTGCACGGTGCGCGG
GATGGTGTTCCGAAGACTTGGTGCCCATCCACGAATGCATGTATTGTACA
CGCCGAAGAAAGCAGAGAATGCTTTCTGATACTGCGTGAAGCATCCAGTC
CTGTTTTCGCGCTGATATTGCAGCACTGGCGACGACAGTGGCATTCGTTT
TGGGGTTGGCAACACAACTGAGGCCTGCACAACCAGCGGCGAAGTTTCGA
CAGGGTCCAAACTCGCGACGTTGGCGCACGACAGTGGGCTTTACAAACTC
CGGGCGACGTAGGGGTATCGAGGTAGCTCTTCGGCGACACAATCCCTGTA
CAATACCTTGAGAGCTTTTCCCGATTAACATGAAGGCAGTGCGCACCATC
AAGTCGATTCTTTGCTTTCCGACGCATGTGCACGAGACCCTGCCGTGACG
CCGCGGTACACTCTCACCTCAAATGCTCCTCTCAACTTGCCCGGATCATT
CGTTTCCCAGGACACTGCTCGGATCGGGCACTTGGTTTACAAGTTCCCCC
GCCTTCTGTTCAAAGACGTGGAAACCCAGCTCCTGCCTCGGGCAGAAGAG
TTTAGAAAGGTAAGCATTTCGTGACGAACATGTGCAAGTGAAGGCCGTAC
CTGGCACCTGGCACCTGGCACCTGGTAAAATGTTTTGTGAGTGCAGGCGC
CTGTGACAGCTGCAACGCATACGTTCTTCGAAGTGTACGGCTCTTAAGTC
GGCAGTCCTCGCGAGAGATATTTGATTTTTCTTCTAGTTGGTTGATCTCA
CGTTCAGAACTCTCAACTTTTGCTGACAAACAAGACGCATTTTCACGCCT
CGTCGGCGCTGGCATGGCGTCAGGTGTCCGGCTGTATCCGCCCCAGAGTT
TAGTATGCGATTGGGCGCACAAACGGCGCGCGACACGTCTTGGAGGGATC
GGCCTCCACTTCTGGCGACGCCGTCGAGTGTTGTTCTTGTTGTTGCTGTT
GTTGTTGCTGCTGCTGTTGTTGTTGCGTTGACCGAAAACTGGATCTGGCT
GTATGTCATGCGCGTCTTGGTCCCGGTCCGCCATGGTGTTGGCCGATAGT
CTCATCGCGCCACGCCCATCTCCCTTTGGCGTGCTACGCCGAGGAGGCAC
ATCTTACTGTCGAGAGCGGAGGTGGGGCTGTCCTACTGATCTTCATGCCG
TACTCGTGAGACCGGCGACCATTCATACAAGAAGGCCTGTATGGATTACG
CCGAGGGTGCAAGGACGCAAACGAAGACGGCAAAAAGCCTCAATGTCTGC
TCCCACACTCTGTGGTGGATGAATGTTTGATTTTGACATATGTCCACTTG
CGTCTCTACCGGGGTGCGCGCGCAGGCGATGGGGCTCGAAGGCCTGAAGC
CCCTTGCCCCGCGAGATCGCCTGAGACCCAAGCGCTACGGAAGTTTCACT
GCCGAAGACGATGGCGAAGGTGGCGACGGCAGGAGAAGTGGGGGAGGTAG
AGGTGGAGGGAGGGGGCGCCGCAGCGGATCTGGGAGATTCCGCAGTAATG
ATAGCAGTGGGGGCTCCTCCGGGAGGATGGGCGGTAGGGGGGCGCGGAGC
GGCGCCGGTAGAGCAAGAAGTGCC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig63:588712..596635+

>mRNA_P-fluviatile_contig63.13006.1 ID=mRNA_P-fluviatile_contig63.13006.1|Name=mRNA_P-fluviatile_contig63.13006.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2598bp|location=Sequence derived from alignment at P-fluviatile_contig63:588712..596635+ (Porterinema fluviatile SAG_2381)
GAAGGGCTCACGGCAGATGAGGAAGGGCTCACGGCAGATGAGGTGGAACG
GAGGCTAATCAGCGCCGGGGTGCTGAGAGAGGACGGCGCCGAAATCGACG
TGGACGACCTCGACGGAGAAGGGGATGGACGCGGAGTGTTCAACGAAATC
GAGGTTTCCGACGGAGAGGAGGCCTGTCGTATATTGGAGGAGCGGCTCGG
CTTCAAAGAGGTGGAACGGAGGCTAATCAGCGCCGGGGTGCTGAGAGAGG
ACGGCGCCGAAATCGACGTGGACGACCTCGACGGAGAAGGGGATGGACGC
GGAGTGTTCAACGAAATCGAGGTTTCCGACGGAGAGGAGGCCTGTCGTAT
ATTGGAGGAGCGGCTCGGCTTCAAAGAGGAGGGCTTAGCCTACCTGCAGA
GCAAGTACCCCCCCCTCCGCGGGGAACTCTGGTACCGTAGGGAACCCTCG
TTGGGGGATGGAAAGCCCGGGCAGAAATATTTGGACGTCTTCTTCCTGGA
GGAGACCCTTCCGGACCTCCTGGACCTGCTCCTGGAAGAGGAAGTAGAGG
AACGGGAAGGACGCGGCGGGGGCGGCGTTGGTCTGACCCCCGAGCAGGAG
GGCTTAGCCTACCTGCAGAGCAAGTACCCCCCCCTCCGCGGGGAACTCTG
GTACCGTAGGGAACCCTCGTTGGGGGATGGAAAGCCCGGGCAGAAATATT
TGGACGTCTTCTTCCTGGAGGAGACCCTTCCGGACCTCCTGGACCTGCTC
CTGGAAGAGGAAGTAGAGGAACGGGAAGGACGCGGCGGGGGCGGCGTTGG
TCTGACCCCCGAGCAGGTACGGGACATGCTGACCCACACTCCCGCTCTGT
TGGGGGTGGAAGCTTCGGACGCCCGAAACGTCGTGAACTACCTCCGCTGC
GAGCTGGGCCTGCGTGGCGGCGGCCGGCTTGCCTCCGCGCTCGCCGGGTG
CCCCCCAATGCTCATGTACAACACTTGGGACAACCTGCGCAAGAAGGTAC
GGGACATGCTGACCCACACTCCCGCTCTGTTGGGGGTGGAAGCTTCGGAC
GCCCGAAACGTCGTGAACTACCTCCGCTGCGAGCTGGGCCTGCGTGGCGG
CGGCCGGCTTGCCTCCGCGCTCGCCGGGTGCCCCCCAATGCTCATGTACA
ACACTTGGGACAACCTGCGCAAGAAGGTGTCGTACTATCGCGAAGCACTG
GCGTGGACAAATGAGGACGTTGCTTCGATGCTTCCCCTGTACCCGAACTT
CTTGTCCATCAAGATGGAGAATGACGTCATCGAGGTCATCGACTACCTCA
GGTGTCGTACTATCGCGAAGCACTGGCGTGGACAAATGAGGACGTTGCTT
CGATGCTTCCCCTGTACCCGAACTTCTTGTCCATCAAGATGGAGAATGAC
GTCATCGAGGTCATCGACTACCTCAGGACGGAGATGGGCCTCCAGCCCTT
TGTGGTTGCGGCGATGGTGAGGGAGTTCCCGCAGCTTCTGGAGGTTCGGC
CGAAGCGTCTGAAGACGCTGGTCAGGTATCTCTTGAAGGACGGAGATGGG
CCTCCAGCCCTTTGTGGTTGCGGCGATGGTGAGGGAGTTCCCGCAGCTTC
TGGAGGTTCGGCCGAAGCGTCTGAAGACGCTGGTCAGGTATCTCTTGAAG
GTGTTGGACATCCCGAAAACCGGAATCGCCGTCCTGCTCAGCAAGCATCC
TCATGCCTGCAGCCTGGAGGCCGAGGCCAACCTCGCCCCGCTGAGGCAGT
TCTTCGAGAGAGAGCTCTTCGTAGAAGTGTTGGACATCCCGAAAACCGGA
ATCGCCGTCCTGCTCAGCAAGCATCCTCATGCCTGCAGCCTGGAGGCCGA
GGCCAACCTCGCCCCGCTGAGGCAGTTCTTCGAGAGAGAGCTCTTCGTAG
AAGACACTGCTCGGATCGGGCACTTGGTTTACAAGTTCCCCCGCCTTCTG
TTCAAAGACGTGGAAACCCAGCTCCTGCCTCGGGCAGAAGAGTTTAGAAA
GGACACTGCTCGGATCGGGCACTTGGTTTACAAGTTCCCCCGCCTTCTGT
TCAAAGACGTGGAAACCCAGCTCCTGCCTCGGGCAGAAGAGTTTAGAAAG
GCGATGGGGCTCGAAGGCCTGAAGCCCCTTGCCCCGCGAGATCGCCTGAG
ACCCAAGCGCTACGGAAGTTTCACTGCCGAAGACGATGGCGAAGGTGGCG
ACGGCAGGAGAAGTGGGGGAGGTAGAGGTGGAGGGAGGGGGCGCCGCAGC
GGATCTGGGAGATTCCGCAGTAATGATAGCAGTGGGGGCTCCTCCGGGAG
GATGGGCGGTAGGGGGGCGCGGAGCGGCGCCGGTAGAGCAAGAAGTGCCG
CGATGGGGCTCGAAGGCCTGAAGCCCCTTGCCCCGCGAGATCGCCTGAGA
CCCAAGCGCTACGGAAGTTTCACTGCCGAAGACGATGGCGAAGGTGGCGA
CGGCAGGAGAAGTGGGGGAGGTAGAGGTGGAGGGAGGGGGCGCCGCAGCG
GATCTGGGAGATTCCGCAGTAATGATAGCAGTGGGGGCTCCTCCGGGAGG
ATGGGCGGTAGGGGGGCGCGGAGCGGCGCCGGTAGAGCAAGAAGTGCC
back to top