prot_P-fluviatile_contig6.12426.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12426.1
Unique Nameprot_P-fluviatile_contig6.12426.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length108
Homology
BLAST of mRNA_P-fluviatile_contig6.12426.1 vs. uniprot
Match: D7FHU0_ECTSI (Cytochrome c oxidase subunit VIa n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHU0_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 2.260e-53
Identity = 87/103 (84.47%), Postives = 94/103 (91.26%), Query Frame = 0
Query:    2 AFVRTAVRRPAAAAVASARRSMSGGDAAHAAEEMSKWKKTTVGMGVLSVAVTGLVLATEEHHHRDEDAPVPSYMKIRNKPYPWMCSDCSLLDSECFAKCKAER 104
            A VR AVRRPAAAA +SARRSMSG DAAHAAEEM+KWKK T GMGVLS+AVT LVLATEEHHHRDEDAP+PSYMKIRNKP+PW C+DC+LLDS CFAKCKAER
Sbjct:    4 ALVRAAVRRPAAAAASSARRSMSG-DAAHAAEEMAKWKKMTAGMGVLSLAVTTLVLATEEHHHRDEDAPIPSYMKIRNKPHPWNCADCTLLDSACFAKCKAER 105          
BLAST of mRNA_P-fluviatile_contig6.12426.1 vs. uniprot
Match: A0A4D9D930_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D930_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.130e-19
Identity = 42/83 (50.60%), Postives = 56/83 (67.47%), Query Frame = 0
Query:   25 GGDAAHAAEEMSKWKKTT-VGMGVLSVAVTGLVLATEEHHHRDE-DAPVPSYMKIRNKPYPWMCSDCSLLDSECFAKCKAERA 105
            GGD  H A+E+ KW+K + V  GV+ +     +L+   H H +  D P+P YM IR+KP+PW CSDCSL D++CF KCKAERA
Sbjct:   26 GGD--HGADEVDKWRKISIVATGVVILMSGRELLSLSSHGHGEHSDKPLPDYMHIRSKPFPWECSDCSLFDTDCFKKCKAERA 106          
BLAST of mRNA_P-fluviatile_contig6.12426.1 vs. uniprot
Match: A0A7S2G097_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G097_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.610e-15
Identity = 39/88 (44.32%), Postives = 56/88 (63.64%), Query Frame = 0
Query:   18 SARRSMSGGDAAHAAE-EMSKWKKTTVGMGVLSVAVTGLVLATEEHHHRDEDAPVPSYMKIRNKPYPWMCSDCSLLDSECFAKCKAER 104
            S+ R+MSGG     AE +M+ W K +V + +  V+V G+V+   E  H   +AP  S+ KIR KPYPW CSDC+L D EC+ +C+A +
Sbjct:   19 SSTRAMSGGHCPVQAEADMNNWIKISV-VAIGGVSVAGVVIGYLESQHHHHEAPPRSFKKIRAKPYPWECSDCTLFDLECWKECRANK 105          
BLAST of mRNA_P-fluviatile_contig6.12426.1 vs. uniprot
Match: A0A7S1MUA2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1MUA2_HEMAN)

HSP 1 Score: 70.9 bits (172), Expect = 1.410e-13
Identity = 42/102 (41.18%), Postives = 57/102 (55.88%), Query Frame = 0
Query:    4 VRTAVRRPAAAAVASARRSMSGGDAAHAAEEMSKWKKTTVGMGVLSVAVTGLVLATEEHHHRDEDAPVPSYMKIRNKPYPWMCSDCSLLDSECFAKCKAERA 105
            VRTAV RP       A R MSG D   A + M  WK  +    V +VA+ G V +   H H D +     YM +RNK +PW CSDC+L DS+C+A+ +A ++
Sbjct:   25 VRTAVSRP-------AFRQMSG-DREEATKLMGTWKTISAVGFVATVAIGGFVYSQSVHEHFDFEKNKFHYMHVRNKQFPWSCSDCNLFDSKCWAEARAAKS 118          
BLAST of mRNA_P-fluviatile_contig6.12426.1 vs. uniprot
Match: A0A7S4EH99_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EH99_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.680e-12
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 0
Query:   34 EMSKWKKTTVGMGVLS-VAVTGLVLATEEHHHRDEDAPVPSYMKIRNKPYPWMCSDCSLLDSECFAKCKAERA 105
            E+  W K ++ + V   VA+    LA EEHHHR  D P+P YM IR+K +PW C  C L D  C+ KC+ E++
Sbjct:   34 ELWTWIKISIFVCVPGCVAMVAKDLAIEEHHHRP-DGPLPEYMSIRSKEFPWECDQCPLFDLNCWKKCREEQS 105          
BLAST of mRNA_P-fluviatile_contig6.12426.1 vs. uniprot
Match: A0A7S3Y541_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y541_HETAK)

HSP 1 Score: 65.5 bits (158), Expect = 3.670e-10
Identity = 33/75 (44.00%), Postives = 41/75 (54.67%), Query Frame = 0
Query:   35 MSKWKKTTVGMGVLSVAVTGLVLATEEHHHRDEDAPVPS----YMKIRNKPYPWMCSDCSLLDSECFAKCKAERA 105
            M KWKK + GM V  + V G++ A +   H             YMKIRNKPYPW C+DC   DS C  +CKA+ A
Sbjct:    1 MVKWKKMSQGM-VAFMGVVGVLTAIQHSMHXXXXXXXXXXXXXYMKIRNKPYPWTCTDCDFFDSACHKECKAKLA 74          
BLAST of mRNA_P-fluviatile_contig6.12426.1 vs. uniprot
Match: A0A7S4DCJ6_HETAK (Hypothetical protein (Fragment) n=5 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCJ6_HETAK)

HSP 1 Score: 65.5 bits (158), Expect = 3.690e-10
Identity = 33/75 (44.00%), Postives = 41/75 (54.67%), Query Frame = 0
Query:   35 MSKWKKTTVGMGVLSVAVTGLVLATEEHHHRDEDAPVPS----YMKIRNKPYPWMCSDCSLLDSECFAKCKAERA 105
            M KWKK + GM V  + V G++ A +   H             YMKIRNKPYPW C+DC   DS C  +CKA+ A
Sbjct:    1 MVKWKKMSQGM-VAFMGVVGVLTAIQHSMHXXXXXXXXXXXXXYMKIRNKPYPWTCTDCDFFDSACHKECKAKLA 74          
BLAST of mRNA_P-fluviatile_contig6.12426.1 vs. uniprot
Match: A0A7S0EE19_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EE19_9CRYP)

HSP 1 Score: 59.7 bits (143), Expect = 2.960e-9
Identity = 29/73 (39.73%), Postives = 37/73 (50.68%), Query Frame = 0
Query:   33 EEMSKWKKTTVGMGVLSVAVTGLVLATEEHHHRDEDAPVPS----YMKIRNKPYPWMCSDCSLLDSECFAKCK 101
            EE   WK  ++G  VL   V          HH D  A        Y+++RNK +PW CSDC+L DSEC+  CK
Sbjct:   41 EESDFWKNVSLGGLVLVGVVGAWEYKVHLDHHNDPHADPEKNNFPYIRVRNKEFPWSCSDCNLFDSECWKACK 113          
BLAST of mRNA_P-fluviatile_contig6.12426.1 vs. uniprot
Match: A0A7S0DDR3_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0DDR3_MICPS)

HSP 1 Score: 55.8 bits (133), Expect = 6.760e-8
Identity = 41/105 (39.05%), Postives = 52/105 (49.52%), Query Frame = 0
Query:    6 TAVRRPAAAAVASARRSMSGGDAAHAAEEMSKWKKTT-------VGMGVLSVAVTGLVLATEEHHHRDEDAPVPSYMKIRNKPYPWMCSDCSLLDSECFAKCKAE 103
            T  RR   A V  +RR+MSGG       EM+KW+  T       VG G+ S        A  EHHH  E  P  SY++IRNK +PW   DC L +   + KC+ E
Sbjct:    9 TLARRAGKAPVRVSRRNMSGGSIEEEIAEMNKWRAVTFLAVPACVGFGIYS-------FANMEHHHAAE-RPAYSYLRIRNKIFPWG-GDCGLFE---YGKCQEE 101          
BLAST of mRNA_P-fluviatile_contig6.12426.1 vs. uniprot
Match: B8BXS5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXS5_THAPS)

HSP 1 Score: 56.2 bits (134), Expect = 1.080e-7
Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 0
Query:   33 EEMSKWKKTTVGMG----VLSVAVTGLVLATEEHHHRDEDAPVPSYMKIRNKPYPWMCSDCSLLDSECFAKCKAER 104
            +EM KW K +  +     VLSV     ++   +H HR    P+P YM I+ K +PW C  C+L D EC+ KC+AE+
Sbjct:   67 QEMWKWVKISAVVATPVCVLSVLKDIFLV---DHVHRPH-GPLPDYMNIQVKEFPWECETCALFDLECWKKCRAEQ 138          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12426.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FHU0_ECTSI2.260e-5384.47Cytochrome c oxidase subunit VIa n=2 Tax=Ectocarpu... [more]
A0A4D9D930_9STRA1.130e-1950.60Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2G097_9STRA1.610e-1544.32Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1MUA2_HEMAN1.410e-1341.18Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S4EH99_9STRA1.680e-1243.84Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S3Y541_HETAK3.670e-1044.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4DCJ6_HETAK3.690e-1044.00Hypothetical protein (Fragment) n=5 Tax=Heterosigm... [more]
A0A7S0EE19_9CRYP2.960e-939.73Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S0DDR3_MICPS6.760e-839.05Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
B8BXS5_THAPS1.080e-739.47Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036418Cytochrome c oxidase, subunit VIa superfamilyGENE3D4.10.95.10coord: 24..92
e-value: 1.2E-9
score: 40.0
IPR036418Cytochrome c oxidase, subunit VIa superfamilySUPERFAMILY81411Mitochondrial cytochrome c oxidase subunit VIacoord: 28..84
IPR001349Cytochrome c oxidase, subunit VIaPANTHERPTHR11504CYTOCHROME C OXIDASE POLYPEPTIDE VIAcoord: 7..103
NoneNo IPR availablePANTHERPTHR11504:SF0CYTOCHROME C OXIDASE SUBUNIT 6A, MITOCHONDRIALcoord: 7..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:982464..984515 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12426.1mRNA_P-fluviatile_contig6.12426.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 982464..984515 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12426.1 ID=prot_P-fluviatile_contig6.12426.1|Name=mRNA_P-fluviatile_contig6.12426.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=108bp
AAFVRTAVRRPAAAAVASARRSMSGGDAAHAAEEMSKWKKTTVGMGVLSV
AVTGLVLATEEHHHRDEDAPVPSYMKIRNKPYPWMCSDCSLLDSECFAKC
KAERAEQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036418Cyt_c_oxidase_su6a_sf
IPR001349Cyt_c_oxidase_su6a