prot_P-fluviatile_contig57.12138.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig57.12138.1
Unique Nameprot_P-fluviatile_contig57.12138.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length236
Homology
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BLAST of mRNA_P-fluviatile_contig57.12138.1 vs. uniprot
Match: D8LBB3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBB3_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 2.130e-116
Identity = 181/228 (79.39%), Postives = 199/228 (87.28%), Query Frame = 0 
Query:    1 MRLNKGLEASLLLVQGILAGLTLASTYTMVLADSLESFVGAYEAQAGEFRRAMFILCMLALMGTEDQLMQAKNDGEVWARLGWSGRLDLRVCVAVYGGCLVSSLVCAVTDTKISNAYGYPTEGWYVSAMAEGTLQADVRMWYGCNLMRCLLAWMGWFVVCRRRWRASLLSDQSEIELRGQRDKLSAAEEQISRLNGRNLDSLTTRELQELRGSLKRALDNADRMIGLR 228
            MRLNKG+EA  LLVQG+LAGLTLAS Y M+LA+SLESFV AYEAQAGE RRAMF LC LALMGTEDQLMQAK  GEVWARLGW GRLDL+  V +YGGCLVSSLVCAV DT I+NAYG   EGWYVS M +G L++ V +WYGCNL R LLAW+G F+VCRRRWRASLL DQS+IEL+GQRDKL+AAEEQISRLNGRNLD LTT+ELQELRGSLKRALDNA+RMIGLR
Sbjct:  350 MRLNKGVEAGTLLVQGVLAGLTLASAYAMLLAESLESFVAAYEAQAGEIRRAMFFLCTLALMGTEDQLMQAKGKGEVWARLGWWGRLDLQGSVLLYGGCLVSSLVCAVADTGIANAYGSSAEGWYVSEMEDG-LRSTVLLWYGCNLARLLLAWIGLFLVCRRRWRASLLGDQSQIELKGQRDKLAAAEEQISRLNGRNLDPLTTKELQELRGSLKRALDNAERMIGLR 576
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig57.12138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBB3_ECTSI2.130e-11679.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 170..197
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..139
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..159
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 160..235
NoneNo IPR availableTMHMMTMhelixcoord: 138..160
NoneNo IPR availableTMHMMTMhelixcoord: 9..31
IPR029409Transmembrane protein 237PFAMPF15383TMEM237coord: 6..160
e-value: 8.2E-7
score: 28.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig57contigP-fluviatile_contig57:489849..492652 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig57.12138.1mRNA_P-fluviatile_contig57.12138.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig57 489523..493114 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig57.12138.1 ID=prot_P-fluviatile_contig57.12138.1|Name=mRNA_P-fluviatile_contig57.12138.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=236bp
MRLNKGLEASLLLVQGILAGLTLASTYTMVLADSLESFVGAYEAQAGEFR
RAMFILCMLALMGTEDQLMQAKNDGEVWARLGWSGRLDLRVCVAVYGGCL
VSSLVCAVTDTKISNAYGYPTEGWYVSAMAEGTLQADVRMWYGCNLMRCL
LAWMGWFVVCRRRWRASLLSDQSEIELRGQRDKLSAAEEQISRLNGRNLD
SLTTRELQELRGSLKRALDNADRMIGLRQNNLFTT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029409TMEM237