prot_P-fluviatile_contig55.11891.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig55.11891.1
Unique Nameprot_P-fluviatile_contig55.11891.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1024
Homology
BLAST of mRNA_P-fluviatile_contig55.11891.1 vs. uniprot
Match: D7FLV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV0_ECTSI)

HSP 1 Score: 778 bits (2009), Expect = 2.660e-264
Identity = 470/736 (63.86%), Postives = 536/736 (72.83%), Query Frame = 0
Query:  164 TVTARLRDVVDQLQGELQVGATPQVQSRMELDGLFAELRAKQQGRDGAADTLLTXXXXXXXXXXAGKAAAQAQSLSGSAARPPGRPEALTEGSHDLESLSEMLDRVQTSARTHALEEARFRSMALLSTAGLGAGAIGDDPNRSWVAIGNQRDMKTRFRKIREGRVGWAVLPLLMKAKKAGVPLSTGVYNAAIAAYSGTPRKYKDALRVLNMLRSEKDPGVQPDLGSYNSAMWVCSEAGQWRLVMELMAQAXXXXXXXXXXXXXXXXXXXXXXXXXARARRLLRRMVSERVVSPDVRTYNGLLEAAGMGSPSPRQHMIEVVHEMEQAGVEPNSYTYTLLLECLARRRKTHDGFQVMARLVDARVPLTPLGHRAGLKFCESYGDWRRAMVLMEDMRVAKHRPSGYLYLLAVKACAXXXXXXXXXSLMVERCSLDAREEREANEKGSARPPSPRRAEAEAKAKRRAAKTNMETLEAVLSAVSEAGQFEVAIRLVQQMRSAGYTPSKECYVYTLRAAAKWGRWDVIEGLMQDMRALGVGVADDATPPEETENVANGA--ESGGGXGASGDSRSRVRLSSDCYAPLVEAYAQCSMWERAIEAYKEGFAVCPERLTVEPVNYRVYECVLKACVGAADGLTALEVLRRQVAEPLLLQRLPPSPLSPPHTALAIGDGXXXXXXXXXXXXXXXXXVETDVSGGPPDRRCWSLAAEALGRAGMVDEGHRILMEMVISGLPLRESTK 897
            TV++RL+DVV QLQGEL+ G TPQV+S ++LD LFA+LR ++    G      T          + K   +  S    AA   G  +A  + + DLESLS MLDRVQ SA+   L EA  RS+ L S      G IGDDP RSWV IGNQRDMKTRFR IREGRVGWAVLPL+MKAK+AG+PLSTGVYNAAIAAYSGTPRKY+DALRVLNMLR E+DPGV+PDLGSYN+AMWVCSEAGQWRLVMELM Q XXXXXXXXXXXXXXXXXXXXXXXXX                        GL+EAAGMGS +PR+HMIEVVHEMEQAGVEPNSYT+T LL CLARRRK  DGFQVMARLVDAR PL P GHRAGL+FC++YGDWRRAM+LMEDMRVAK RPSG +YLLAVKACA         SLMVER +LD REE+EANEK   +P   ++ EA AKAK++AA+T+M+TLE VLSAVSEAGQFEVA+RLVQQMR+AG TPSK+CY+YTLRAA+KWGRWDVIE LM+DMRAL VGV  +    +ET+ + +G    +G G G  G+      LSSDCYAPLVEAYAQ SMWERAIEAY+EGF V  E     PV YRV+ECVLKACV  +DG TALEV+ RQ AEP  LQ+L     S   T    G G                   T++SGGPPDRRCW LAAEALGRAGM+ EGHR+LM MV SG+PLRESTK
Sbjct:   63 TVSSRLQDVVSQLQGELRAGTTPQVRSSIKLDSLFADLRGQEDTSRGRNSKTPTTTGPKTIPPKSPKQPRRLPSGKFCAA---GSGDAALQETDDLESLSNMLDRVQASAKARDLAEAEARSLELRS-----GGPIGDDPARSWVTIGNQRDMKTRFRNIREGRVGWAVLPLVMKAKQAGIPLSTGVYNAAIAAYSGTPRKYEDALRVLNMLRREEDPGVRPDLGSYNAAMWVCSEAGQWRLVMELMTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXGLVEAAGMGSAAPRKHMIEVVHEMEQAGVEPNSYTFTTLLNCLARRRKIFDGFQVMARLVDARAPLLPHGHRAGLQFCDAYGDWRRAMILMEDMRVAKRRPSGPMYLLAVKACAKGAQWERALSLMVERRALDVREEKEANEKNGGKPLQRQKMEAAAKAKKQAARTHMKTLEVVLSAVSEAGQFEVAMRLVQQMRAAGGTPSKKCYLYTLRAASKWGRWDVIESLMKDMRALRVGVVAE----KETDAMDDGVVVNNGEGKGGGGEQHRPRMLSSDCYAPLVEAYAQASMWERAIEAYQEGFVVGREGGEAGPVKYRVFECVLKACVEVSDGRTALEVIGRQAAEPKALQKL-----SSAITTEGEGKG-------------------TELSGGPPDRRCWCLAAEALGRAGMIQEGHRVLMAMVDSGIPLRESTK 761          
BLAST of mRNA_P-fluviatile_contig55.11891.1 vs. uniprot
Match: A0A6H5L472_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L472_9PHAE)

HSP 1 Score: 593 bits (1529), Expect = 1.460e-197
Identity = 365/539 (67.72%), Postives = 418/539 (77.55%), Query Frame = 0
Query:  164 TVTARLRDVVDQLQGELQVGATPQVQSRMELDGLFAELRAKQQGRDGAADTLLTXXXXXXXXXXAGKAAAQAQSLSGSAARPPGRPEALTEGSHDLESLSEMLDRVQTSARTHALEEARFRSMALLSTAGLGAGAIGDDPNRSWVAIGNQRDMKTRFRKIREGRVGWAVLPLLMKAKKAGVPLSTGVYNAAIAAYSGTPRKYKDALRVLNMLRSEKDPGVQPDLGSYNSAMWVCSEAGQWRLVMELMAQAXXXXXXXXXXXXXXXXXXXXXXXXXARARRLLRRMVSERVVSPDVRTYNGLLEAAGMGSPSPRQHMIEVVHEMEQAGVEPNSYTYTLLLECLARRRKTHDGFQVMARLVDARVPLTPLGHRAGLKFCESYGDWRRAMVLMEDMRVAKHRPSGYLYLLAVKACAXXXXXXXXXSLMVERCSLDAREEREANEKGSARPPSPRRAEAEAKAKRRAAKTNMETLEAVLSAVSEAGQFEVAIRLVQQMRSAGYTPSKECYVYTLRAAAKWGRWDVIEGLMQDMRALGVGVADD 702
            TV++RL+DVV QLQGEL+ G+TPQV+S ++LDGLFA+LR ++    G   T  T          + K   Q + L        G  +A  EG+ DLESLS+MLDRVQ SA+   L EA  RS+AL S      G IGDDP RSWV IGNQRD+KTRFR IREGRVGWAVLPL+MKAK+AG+PLSTGVYNAAIAAY+GTPRKY+DALRVLNMLR E+DPGV+PDLGSYN+AMWVCSEAGQWRLVMELM Q XXXXXXXXXXXXXXXXXXXXXXXXX                        GL+EAAGMGS +PR+HMIEVVHEMEQAGVEPNSYT+T LL CLARRRKT DGFQ  ARLVDAR PL P GHRAGL+FC++YGDWRRAM+LMEDMRVAK RPS  +YLLAVKACA  XXXXXXX   VER +LD REE+E +EK   +P   ++ EA AKAK++AA+T+M+TLE VLSAVSEAGQFEVA+RLVQQMR+AG TPSK+CY+YTLRAA+KWGRWDVIE LM+DMRAL VGV  D
Sbjct:  113 TVSSRLQDVVSQLQGELRAGSTPQVRSSIKLDGLFADLRGQEDTPRGRNSTTTTTTGPNTIPPKSPK---QQRRLPNGKLSAAGSGDAALEGTDDLESLSDMLDRVQASAKARDLAEAEARSLALRS-----GGPIGDDPVRSWVTIGNQRDIKTRFRNIREGRVGWAVLPLVMKAKQAGIPLSTGVYNAAIAAYAGTPRKYEDALRVLNMLRREEDPGVRPDLGSYNAAMWVCSEAGQWRLVMELMTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXGLVEAAGMGSAAPRKHMIEVVHEMEQAGVEPNSYTFTTLLICLARRRKTFDGFQ--ARLVDARAPLLPHGHRAGLQFCDAYGDWRRAMILMEDMRVAKRRPSAPMYLLAVKACAKGXXXXXXXXXXVERRALDVREEKEMDEKNGGKPLKRKKVEAVAKAKKQAARTHMKTLEVVLSAVSEAGQFEVAMRLVQQMRAAGGTPSKKCYLYTLRAASKWGRWDVIESLMKDMRALRVGVVAD 640          
BLAST of mRNA_P-fluviatile_contig55.11891.1 vs. uniprot
Match: A0A6H5L7D9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7D9_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 2.880e-47
Identity = 99/164 (60.37%), Postives = 111/164 (67.68%), Query Frame = 0
Query:  734 LSSDCYAPLVEAYAQCSMWERAIEAYKEGFAVCPERLTVEPVNYRVYECVLKACVGAADGLTALEVLRRQVAEPLLLQRLPPSPLSPPHTALAIGDGXXXXXXXXXXXXXXXXXVETDVSGGPPDRRCWSLAAEALGRAGMVDEGHRILMEMVISGLPLRESTK 897
            LSSDCYAPLVEAYAQ SMWERAIEAY+EGF V  E     PV YRVYECVLKACV  +DG TALEV+ RQ AEP  LQ++         T    G+G                    ++SGGPPDRRCW LAAEALGRAGM++EGHR+LM MV SG+PLRESTK
Sbjct:    2 LSSDCYAPLVEAYAQASMWERAIEAYQEGFVVGREGGEAGPVKYRVYECVLKACVEVSDGRTALEVIGRQAAEPKALQKMS-------STITTEGEGKG-----------------AELSGGPPDRRCWCLAAEALGRAGMINEGHRVLMAMVDSGIPLRESTK 141          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig55.11891.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FLV0_ECTSI2.660e-26463.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L472_9PHAE1.460e-19767.72Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L7D9_9PHAE2.880e-4760.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 138..158
NoneNo IPR availableCOILSCoilCoilcoord: 617..637
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 343..510
coord: 479..696
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 482..521
e-value: 4.3E-5
score: 23.5
coord: 377..430
e-value: 1.1E-4
score: 22.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 424..457
e-value: 0.001
score: 17.1
coord: 636..665
e-value: 0.003
score: 15.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 862..889
e-value: 0.73
score: 10.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 457..493
score: 8.254
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 529..563
score: 5.689
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 665..699
score: 6.434
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 735..765
score: 5.656
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 494..528
score: 8.462
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 630..664
score: 9.997
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 386..420
score: 9.569
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 421..455
score: 9.24
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 564..598
score: 6.007
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 858..892
score: 8.879
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 347..378
score: 6.522
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 323..474
e-value: 4.8E-27
score: 97.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 476..531
e-value: 1.2E-6
score: 30.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig55contigP-fluviatile_contig55:193536..205330 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig55.11891.1mRNA_P-fluviatile_contig55.11891.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig55 192979..205357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig55.11891.1 ID=prot_P-fluviatile_contig55.11891.1|Name=mRNA_P-fluviatile_contig55.11891.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1024bp
MVSPVSPLSNAVPPYFKTATGQGSTLLPVATHVTASATAAAASTLERLLL
PGYPCCNDQGRRTLDGRSRGQSVTALNSGQRESEGPPTAAAEGDGRDHTP
ASGATTVATSVSNGNGGRRRWQGRQQQEDDLRTVERVEAGWQEEREEEED
DEEEEQEQEQAMPTVTARLRDVVDQLQGELQVGATPQVQSRMELDGLFAE
LRAKQQGRDGAADTLLTTGGGGGSNSTAGKAAAQAQSLSGSAARPPGRPE
ALTEGSHDLESLSEMLDRVQTSARTHALEEARFRSMALLSTAGLGAGAIG
DDPNRSWVAIGNQRDMKTRFRKIREGRVGWAVLPLLMKAKKAGVPLSTGV
YNAAIAAYSGTPRKYKDALRVLNMLRSEKDPGVQPDLGSYNSAMWVCSEA
GQWRLVMELMAQARQEGIEPDTTSYNCAMKGMAVSRQWARARRLLRRMVS
ERVVSPDVRTYNGLLEAAGMGSPSPRQHMIEVVHEMEQAGVEPNSYTYTL
LLECLARRRKTHDGFQVMARLVDARVPLTPLGHRAGLKFCESYGDWRRAM
VLMEDMRVAKHRPSGYLYLLAVKACAKGGQWERALSLMVERCSLDAREER
EANEKGSARPPSPRRAEAEAKAKRRAAKTNMETLEAVLSAVSEAGQFEVA
IRLVQQMRSAGYTPSKECYVYTLRAAAKWGRWDVIEGLMQDMRALGVGVA
DDATPPEETENVANGAESGGGGGASGDSRSRVRLSSDCYAPLVEAYAQCS
MWERAIEAYKEGFAVCPERLTVEPVNYRVYECVLKACVGAADGLTALEVL
RRQVAEPLLLQRLPPSPLSPPHTALAIGDGGGGRLEEEAAAAAAAAAVET
DVSGGPPDRRCWSLAAEALGRAGMVDEGHRILMEMVISGLPLRESTKETC
RPCCRCRPPPRTASSGTSGGGEDLPEAAWTPVAAAAAAARDTAVVIIIII
MLGPPRPPFSSSPYLHRPFRLLFILLGRTPAHRWPGGREKQGMTTATAAA
WLARREHLLPSFFSTAWSIPRGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf