prot_P-fluviatile_contig5.11252.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig5.11252.1
Unique Nameprot_P-fluviatile_contig5.11252.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length421
Homology
BLAST of mRNA_P-fluviatile_contig5.11252.1 vs. uniprot
Match: A0A6H5J8H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8H8_9PHAE)

HSP 1 Score: 285 bits (730), Expect = 2.220e-82
Identity = 172/279 (61.65%), Postives = 203/279 (72.76%), Query Frame = 0
Query:  154 VPQQQVRCPQHEFFEAHLPWGRRRRISGNLRWKM---GQRTRQV--------------FCAAEGPELVMYDLESDSNAGLPPRAQYFVLGVRSVKTGASIMEIDVTVTDDFE-RTLGWSRNSAAAPGFAHVETRSVTLTAPGRHEHARWVLALEEAQGWTEKREREALVEELELSLPFRENAIEQVRHQLPDDRTIEDILGVSAAKMNPGCVLQSMVFDAAEAAAANAAVEASAGAVSSPEMADTGGXXXG------RKGSIYGAPSSSLRGFFSIFDS 408
            VPQ +   PQ  F EAHLPWG+RRR+SGNLR K+   G+  R+V              FCAAEG ELV+YD ESDSNAGLPPRA+Y V+GVR++KTG +  E++VTV D+ E  +LGW   ++  PG A VETRSVTLTA GRHEHARW LALEEAQ WTEK+EREAL+EELELSLPFRE AIE V H+LPD  TIEDILGVS A  NPGCVL+S+VFDAAEAAA +AA  A+ G +SSPE+  T G XX       RK ++  APS+SLRG FS F+S
Sbjct:  347 VPQARPTPPQGPFLEAHLPWGKRRRMSGNLRLKISGGGRVARRVATSGGREWGVWGGVFCAAEGRELVVYDAESDSNAGLPPRARYLVMGVRALKTGPNAAELEVTVADESEVSSLGWRERASTGPGVAFVETRSVTLTASGRHEHARWSLALEEAQSWTEKKEREALLEELELSLPFREYAIEHVHHRLPDS-TIEDILGVSTAMTNPGCVLKSVVFDAAEAAA-SAAEAAAPGPLSSPEL--TAGSXXXXXXXXTRKLTV--APSASLRGLFSFFES 619          
BLAST of mRNA_P-fluviatile_contig5.11252.1 vs. uniprot
Match: D8LRB4_ECTSI (Cell surface protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB4_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 2.660e-41
Identity = 87/127 (68.50%), Postives = 101/127 (79.53%), Query Frame = 0
Query:  225 LGVRSVKTGASIMEIDVTVTDDFE-RTLGWSRNSAAAPGFAHVETRSVTLTAPGRHEHARWVLALEEAQGWTEKREREALVEELELSLPFRENAIEQVRHQLPDDRTIEDILGVSAAKMNPGCVLQS 350
            +GVR++KTG +  E++VTV D+ E  +LGW   ++  PG A VETRSVTLTA GRHEHARW LALEEAQ WTEK+EREAL+EELELSLPFRE AIE V H+LPD   IEDILGVS A  NPGCVL+S
Sbjct:    1 MGVRALKTGPNAAELEVTVADESEVSSLGWRERASTGPGVAFVETRSVTLTAYGRHEHARWSLALEEAQSWTEKKEREALLEELELSLPFREYAIEHVHHRLPDS-AIEDILGVSTAMTNPGCVLKS 126          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig5.11252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J8H8_9PHAE2.220e-8261.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRB4_ECTSI2.660e-4168.50Cell surface protein n=1 Tax=Ectocarpus siliculosu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig5contigP-fluviatile_contig5:3816039..3820292 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig5.11252.1mRNA_P-fluviatile_contig5.11252.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig5 3816039..3820293 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig5.11252.1 ID=prot_P-fluviatile_contig5.11252.1|Name=mRNA_P-fluviatile_contig5.11252.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=421bp
DDGDAACAAANGVHVGNEGDHGDGGGGNDIDCEDMREMAAMRNGAGGGGS
GGSDGVGGSDGVGGSDDVGGVGGGGGGGVFQRGEMSMEQRRLEERPCADR
SETEGTADAPGAAPEEEEEAEEEETVVFSTHVNAPPPPLPKKAAAAAAAA
SGMVPQQQVRCPQHEFFEAHLPWGRRRRISGNLRWKMGQRTRQVFCAAEG
PELVMYDLESDSNAGLPPRAQYFVLGVRSVKTGASIMEIDVTVTDDFERT
LGWSRNSAAAPGFAHVETRSVTLTAPGRHEHARWVLALEEAQGWTEKRER
EALVEELELSLPFRENAIEQVRHQLPDDRTIEDILGVSAAKMNPGCVLQS
MVFDAAEAAAANAAVEASAGAVSSPEMADTGGGGGGRKGSIYGAPSSSLR
GFFSIFDSSARSPLTGDDASG
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