prot_P-fluviatile_contig22.4803.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig22.4803.1
Unique Nameprot_P-fluviatile_contig22.4803.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length125
Homology
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BLAST of mRNA_P-fluviatile_contig22.4803.1 vs. uniprot
Match: A0A6H5L715_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L715_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 1.070e-24
Identity = 63/109 (57.80%), Postives = 68/109 (62.39%), Query Frame = 0 
Query:    2 RVGSISRADSGVNPHVSVKSFLYAGAASFGSIGVGSGASGSQSFVLXXXXXXXXXXSSIPPDPTPSSKWWDSVASGNTLIPGAGISDAGEQLGGDPFKVPKAPVVGGTD 110
            RVGS    DSG+ P VS       GAA+FGSIG+GSGA GSQSF               PP   PSS+WW   ASGNTLIPGAGISD GE+LG  PFKV KAPV  GTD
Sbjct:  113 RVGSSGLLDSGLTPDVSTVHRSSVGAANFGSIGIGSGAPGSQSF--------------FPPPSAPSSEWWGHAASGNTLIPGAGISDTGEKLGRSPFKVFKAPVFEGTD 207
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BLAST of mRNA_P-fluviatile_contig22.4803.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 2.420e-21
Identity = 65/108 (60.19%), Postives = 79/108 (73.15%), Query Frame = 0 
Query:    3 VGSISRADSGVNPHVSVKSFLYAGAASFGSIGVGSGASGSQSFVLXXXXXXXXXXSSIPPDPTPSSKWWDSVASGNTLIPGAGISDAGEQLGGDPFKVPKAPVVGGTD 110
            VGS S A++G+N H +  +   AG  SFGS+G+GS A GSQSF+  XXXXXXXXX    P PT SS+WW++VASG TLIPGAGI++ GE LG  P KVPKAPV  G+D
Sbjct:    6 VGS-SVANTGLNSHDTAVNRSSAGVTSFGSVGMGSRALGSQSFIPGXXXXXXXXXXXXXPAPTASSRWWENVASGTTLIPGAGITEPGENLGRSPLKVPKAPVFDGSD 112
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BLAST of mRNA_P-fluviatile_contig22.4803.1 vs. uniprot
Match: A0A6H5KW19_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW19_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 4.510e-19
Identity = 51/83 (61.45%), Postives = 60/83 (72.29%), Query Frame = 0 
Query:   11 SGVNPHVSVKSFLYAGAASFGSIGVGSGAS-GSQSFVLXXXXXXXXXXSSIPPDPTPSSKWWDSVASGNTLIPGAGISDAGEQ 92
            SG+NP V   +   AGAASFGSIG+GSGA+ G  SFV           SS+PP PTPSS+WW+SVASGNTLIPGAG +DAGE+
Sbjct:  104 SGLNPDVFAVNRSSAGAASFGSIGIGSGAAVGQSSFVSGTVGGAFRSQSSVPPAPTPSSRWWESVASGNTLIPGAG-TDAGEK 185
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4803.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L715_9PHAE1.070e-2457.80CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K2M6_9PHAE2.420e-2160.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KW19_9PHAE4.510e-1961.45Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig22contigP-fluviatile_contig22:848997..849371 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig22.4803.1mRNA_P-fluviatile_contig22.4803.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig22 848981..849768 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig22.4803.1 ID=prot_P-fluviatile_contig22.4803.1|Name=mRNA_P-fluviatile_contig22.4803.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=125bp
MRVGSISRADSGVNPHVSVKSFLYAGAASFGSIGVGSGASGSQSFVLGTG
NGALGSQSSIPPDPTPSSKWWDSVASGNTLIPGAGISDAGEQLGGDPFKV
PKAPVVGGTDRTCCIPYHGHKIFC*
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