prot_P-fluviatile_contig18.3156.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig18.3156.1
Unique Name	prot_P-fluviatile_contig18.3156.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	322

Homology

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BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 2.530e-116
Identity = 173/209 (82.78%), Postives = 189/209 (90.43%), Query Frame = 0

Query:  113 STLIASATAFVAPTAVRSVAPAASSSSWKMSAGSDYVATLPGAPFPDGKIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADILG 321
            +TLIAS+TAFVAP AVRS APA+S+S+ KMSAGSDYVATLPGAPF DGKIFDPL L+DGAE GEIKLWREAEIKHGRVAMLA +GV+VAE+YHP FMGPDYIGPAVDHFQEISA++PEFW FSLLGMAFIEY TI+KAYAEPS VTGEGGL+D+Y+PGDLGFDPL LKPK +     M TKELNNGRLAMIGIAGMLVQELV PADILG
Sbjct:   13 ATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221

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BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 2.830e-115
Identity = 176/220 (80.00%), Postives = 193/220 (87.73%), Query Frame = 0

Query:  104 MIATRMLLFS--TLIASATAFVAPTAVRSVAPAASSSSWKMSAGSDYVATLPGAPFPDGKIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADILG 321
            M+AT++ L S  TLIAS+TAFVAP AVRS APA+SSS+ KMSAGSDYVATLPGAPF DGKIFDPL L+DGA+  +IK WREAEIKHGRVAMLA+LGVLVAE+YHP FMGPDYIGPAVDHFQEISA+YPEFWVFSLLGMAFIEY TI  A+  PSAVTGEGGLK+DY PGDLGFDPL LKP+ E   + M TKELNNGRLAMIGIAGMLVQEL+ PADILG
Sbjct:    1 MVATQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220

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BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 2.430e-105
Identity = 164/219 (74.89%), Postives = 184/219 (84.02%), Query Frame = 0

Query:  104 MIATRMLL--FSTLIASATAFVAPTAVRSVAPAASSSSWKMSAGSDYVATLPGAPFPDGKIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADIL 320
            M+A++M L   + LIAS+TAFVAP AVRS APA+++S+ KMSAGSDYVATLPGAPF DGKIFDPL L+DGA  G+IK WREAEIKHGRVAMLA+LG+LVAEEYHP FMG D+IGPA+ HFQEISA++PEFW FSLLGMAFIEY TI  A+  PSAVTGEGGLK+DY PGDLGFDPL LKP  E   + M TKELNNGRLAMIGIAGML QELV   DIL
Sbjct:    1 MVASQMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219

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BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 309 bits (791), Expect = 1.070e-102
Identity = 157/209 (75.12%), Postives = 179/209 (85.65%), Query Frame = 0

Query:  113 STLIASATAFVAPTAVRSVAPAASSSSWKMSAGSDYVATLPGAPFPDGKIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADILG 321
            +TLIAS+ AFV P AVRS APA+S+S+ KMSAG+DY+ATLPGA   +GKIFD L LADGA+ GEIKLWREAEIKHGRVAMLA +GV+VAE+YHPFFMGPDYIGPAVDHFQEI+A++P+FW +SLLGMAFIEY TI KAYAEPS VTGEGGL+D+Y+PGDLGFDP  +KPK +     M  KELNNGRLAMIGI GMLVQELV   DILG
Sbjct:   13 ATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218

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BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 277 bits (709), Expect = 7.500e-91
Identity = 134/160 (83.75%), Postives = 144/160 (90.00%), Query Frame = 0

Query:  161 KIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADIL 320
            KIFDPLGLADGAEVG+IKLWREAEIKHGRVAMLA+LGVLVAEEYHPFFMGPDYIGPAVDHFQEISAR+PEFW FSLL +A IEY TI+KAYAEPS VTGEGGL+D+Y+PGDLGFDPL LKP  +    TM TKELNNGRLAMIGIAG LVQELV P +IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174

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BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 269 bits (688), Expect = 2.120e-87
Identity = 129/161 (80.12%), Postives = 141/161 (87.58%), Query Frame = 0

Query:  161 KIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADILG 321
            +IFDPLGL+DGA  G+IK WREAEIKHGRVAMLA+LGV+VAE+YHPFFMGPDYIGPAVDHFQEISA++PEFW FSLLGMAF+EY TI  A+  PSAVTGEGGLK+DY PGDLGFDPL LKP  E   + M TKELNNGRLAMIGIAGML QELV PADILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196

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BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 8.230e-85
Identity = 130/161 (80.75%), Postives = 141/161 (87.58%), Query Frame = 0

Query:  161 KIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADILG 321
            +IFDPLGL+DGA  G+IK WREAEIKHGRVAMLA+LGV+VAE+YHPFFMGPDYIGPAVDHFQEISA++PEFW FSLLGMAFIEY TI  A+  PSAVTGEGGLK+DY PGDLGFDPL LKP  E   + M TKELNNGRLAMIGIAGML QELV PADILG
Sbjct:  232 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392

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BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 3.240e-83
Identity = 146/220 (66.36%), Postives = 159/220 (72.27%), Query Frame = 0

Query:  104 MIATRMLL--FSTLIASATAFVAPTAVRSVAPAASSSSWKMSAGSDYVATLPGAPFPDGKIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADILG 321
            M+A++M +   +TLIAS+TAFVAP AVRSV    SS   KMSAGSDYVATLPGAPF DGKIFDPLGL+DGA  G+IK WREAEIKHGRVAMLA+LGV+VAE                            FW FSLLGMAFIEY TI  A+  PSAVTGEGGLK+DY PGDLGFDPL LKP  E   + M TKELNNGRLAMIGIAGML QELV PADILG
Sbjct:    1 MVASQMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192

[Close]

BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 261 bits (667), Expect = 3.910e-83
Identity = 127/205 (61.95%), Postives = 165/205 (80.49%), Query Frame = 0

Query:  117 ASATAFVAPTAVRSVAPAASSSSWKMSAGSDYVATLPGAPFPDGKIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADILG 321
            AS  AF+ PT   +++   +S++ +MSAGSDYV+TLPGAPF DGK++DP+GL+  A+  +IK WREAEIKHGRVAMLA++GVLVAE +HP F+GPDYIGPA+ HF+EI+AR+P+FW  +LL +A++EY+ I+  +AE   VTGEGG++ DY PGDLGFDPLGL P+ E + N M TKELN+GRLAMIGI GM+VQELV+P  I G
Sbjct:   68 ASCEAFIVPTPT-TLSARPTSTAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271

[Close]

BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 6.470e-72
Identity = 127/213 (59.62%), Postives = 156/213 (73.24%), Query Frame = 0

Query:  113 STLIASATAFVAPTAV--RSVAPAASSSSWKMSAGSDYVATLPGAPF---PDGKIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADIL 320
            +TLIAS+ AFVAP A    S+A  A+SS+ KM+AGSDY A+LPGAPF    +GK FDP GLA   +   IK WREAE+KHGRV+MLAA+G+LV+E +HP FMGP YIGPAV+H Q+I+  YP FWV SL  +AFIE QTI  A+   S VTG G LK +Y PGDLGFDPLGL PK  ED+  + ++EL+ GR AMIG+ GM+VQE+V    IL
Sbjct:   12 ATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7S1_ECTSI	2.530e-116	82.78	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7Q6_ECTSI	2.830e-115	80.00	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7Q9_ECTSI	2.430e-105	74.89	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7S0_ECTSI	1.070e-102	75.12	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7Q7_ECTSI	7.500e-91	83.75	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7S5_ECTSI	2.120e-87	80.12	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
A0A6H5JWB4_9PHAE	8.230e-85	80.75	LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
A0A6H5K8D0_9PHAE	3.240e-83	66.36	LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A...	[more]
D7G5B4_ECTSI	3.910e-83	61.95	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7FQG7_ECTSI	6.470e-72	59.62	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 141..320 e-value: 7.5E-36 score: 125.6
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 151..312 e-value: 6.7E-38 score: 130.7
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 109..315
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 151..320
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 109..315

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig18	contig	P-fluviatile_contig18:496049..499048 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig18.3156.1	mRNA_P-fluviatile_contig18.3156.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig18 495353..499070 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig18.3156.1 ID=prot_P-fluviatile_contig18.3156.1|Name=mRNA_P-fluviatile_contig18.3156.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=322bp
MWLWASPTENPTQAMISTRYCTKLKLRPLSNNGPLGGKWIKIFQRIFRKD
PKSFVGGCSSQHLYSNLAASSLISFAASHTHKPKPLSPRIPNFGTPFSSS
LCAMIATRMLLFSTLIASATAFVAPTAVRSVAPAASSSSWKMSAGSDYVA
TLPGAPFPDGKIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLV
AEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKA
YAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRL
AMIGIAGMLVQELVKPADILG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind
IPR001344	Chloro_AB-bd_pln