mRNA_P-fluviatile_contig18.3156.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig18.3156.1
Unique NamemRNA_P-fluviatile_contig18.3156.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 8.020e-113
Identity = 173/209 (82.78%), Postives = 189/209 (90.43%), Query Frame = 2 
Query:  359 STLIASATAFVAPTAVRSVAPAASSSSWKMSAGSDYVATLPGAPFPDGKIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADILG 985
            +TLIAS+TAFVAP AVRS APA+S+S+ KMSAGSDYVATLPGAPF DGKIFDPL L+DGAE GEIKLWREAEIKHGRVAMLA +GV+VAE+YHP FMGPDYIGPAVDHFQEISA++PEFW FSLLGMAFIEY TI+KAYAEPS VTGEGGL+D+Y+PGDLGFDPL LKPK +     M TKELNNGRLAMIGIAGMLVQELV PADILG
Sbjct:   13 ATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221
[Close]
BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 8.790e-112
Identity = 176/220 (80.00%), Postives = 193/220 (87.73%), Query Frame = 2 
Query:  332 MIATRMLLFS--TLIASATAFVAPTAVRSVAPAASSSSWKMSAGSDYVATLPGAPFPDGKIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADILG 985
            M+AT++ L S  TLIAS+TAFVAP AVRS APA+SSS+ KMSAGSDYVATLPGAPF DGKIFDPL L+DGA+  +IK WREAEIKHGRVAMLA+LGVLVAE+YHP FMGPDYIGPAVDHFQEISA+YPEFWVFSLLGMAFIEY TI  A+  PSAVTGEGGLK+DY PGDLGFDPL LKP+ E   + M TKELNNGRLAMIGIAGMLVQEL+ PADILG
Sbjct:    1 MVATQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220
[Close]
BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 6.120e-102
Identity = 164/219 (74.89%), Postives = 184/219 (84.02%), Query Frame = 2 
Query:  332 MIATRMLL--FSTLIASATAFVAPTAVRSVAPAASSSSWKMSAGSDYVATLPGAPFPDGKIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADIL 982
            M+A++M L   + LIAS+TAFVAP AVRS APA+++S+ KMSAGSDYVATLPGAPF DGKIFDPL L+DGA  G+IK WREAEIKHGRVAMLA+LG+LVAEEYHP FMG D+IGPA+ HFQEISA++PEFW FSLLGMAFIEY TI  A+  PSAVTGEGGLK+DY PGDLGFDPL LKP  E   + M TKELNNGRLAMIGIAGML QELV   DIL
Sbjct:    1 MVASQMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219
[Close]
BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 309 bits (791), Expect = 2.520e-99
Identity = 157/209 (75.12%), Postives = 179/209 (85.65%), Query Frame = 2 
Query:  359 STLIASATAFVAPTAVRSVAPAASSSSWKMSAGSDYVATLPGAPFPDGKIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADILG 985
            +TLIAS+ AFV P AVRS APA+S+S+ KMSAG+DY+ATLPGA   +GKIFD L LADGA+ GEIKLWREAEIKHGRVAMLA +GV+VAE+YHPFFMGPDYIGPAVDHFQEI+A++P+FW +SLLGMAFIEY TI KAYAEPS VTGEGGL+D+Y+PGDLGFDP  +KPK +     M  KELNNGRLAMIGI GMLVQELV   DILG
Sbjct:   13 ATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218
[Close]
BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 277 bits (709), Expect = 1.270e-87
Identity = 134/160 (83.75%), Postives = 144/160 (90.00%), Query Frame = 2 
Query:  503 KIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADIL 982
            KIFDPLGLADGAEVG+IKLWREAEIKHGRVAMLA+LGVLVAEEYHPFFMGPDYIGPAVDHFQEISAR+PEFW FSLL +A IEY TI+KAYAEPS VTGEGGL+D+Y+PGDLGFDPL LKP  +    TM TKELNNGRLAMIGIAG LVQELV P +IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174
[Close]
BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 269 bits (688), Expect = 3.240e-84
Identity = 129/161 (80.12%), Postives = 141/161 (87.58%), Query Frame = 2 
Query:  503 KIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADILG 985
            +IFDPLGL+DGA  G+IK WREAEIKHGRVAMLA+LGV+VAE+YHPFFMGPDYIGPAVDHFQEISA++PEFW FSLLGMAF+EY TI  A+  PSAVTGEGGLK+DY PGDLGFDPL LKP  E   + M TKELNNGRLAMIGIAGML QELV PADILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196
[Close]
BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 1.270e-81
Identity = 130/161 (80.75%), Postives = 141/161 (87.58%), Query Frame = 2 
Query:  503 KIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADILG 985
            +IFDPLGL+DGA  G+IK WREAEIKHGRVAMLA+LGV+VAE+YHPFFMGPDYIGPAVDHFQEISA++PEFW FSLLGMAFIEY TI  A+  PSAVTGEGGLK+DY PGDLGFDPL LKP  E   + M TKELNNGRLAMIGIAGML QELV PADILG
Sbjct:  232 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392
[Close]
BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 4.310e-80
Identity = 146/220 (66.36%), Postives = 159/220 (72.27%), Query Frame = 2 
Query:  332 MIATRMLL--FSTLIASATAFVAPTAVRSVAPAASSSSWKMSAGSDYVATLPGAPFPDGKIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADILG 985
            M+A++M +   +TLIAS+TAFVAP AVRSV    SS   KMSAGSDYVATLPGAPF DGKIFDPLGL+DGA  G+IK WREAEIKHGRVAMLA+LGV+VAE                            FW FSLLGMAFIEY TI  A+  PSAVTGEGGLK+DY PGDLGFDPL LKP  E   + M TKELNNGRLAMIGIAGML QELV PADILG
Sbjct:    1 MVASQMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192
[Close]
BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 261 bits (667), Expect = 5.390e-80
Identity = 127/205 (61.95%), Postives = 165/205 (80.49%), Query Frame = 2 
Query:  371 ASATAFVAPTAVRSVAPAASSSSWKMSAGSDYVATLPGAPFPDGKIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADILG 985
            AS  AF+ PT   +++   +S++ +MSAGSDYV+TLPGAPF DGK++DP+GL+  A+  +IK WREAEIKHGRVAMLA++GVLVAE +HP F+GPDYIGPA+ HF+EI+AR+P+FW  +LL +A++EY+ I+  +AE   VTGEGG++ DY PGDLGFDPLGL P+ E + N M TKELN+GRLAMIGI GM+VQELV+P  I G
Sbjct:   68 ASCEAFIVPTPT-TLSARPTSTAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271
[Close]
BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 5.690e-69
Identity = 127/213 (59.62%), Postives = 156/213 (73.24%), Query Frame = 2 
Query:  359 STLIASATAFVAPTAV--RSVAPAASSSSWKMSAGSDYVATLPGAPF---PDGKIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKAYAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRLAMIGIAGMLVQELVKPADIL 982
            +TLIAS+ AFVAP A    S+A  A+SS+ KM+AGSDY A+LPGAPF    +GK FDP GLA   +   IK WREAE+KHGRV+MLAA+G+LV+E +HP FMGP YIGPAV+H Q+I+  YP FWV SL  +AFIE QTI  A+   S VTG G LK +Y PGDLGFDPLGL PK  ED+  + ++EL+ GR AMIG+ GM+VQE+V    IL
Sbjct:   12 ATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7S1_ECTSI8.020e-11382.78Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q6_ECTSI8.790e-11280.00Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI6.120e-10274.89Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S0_ECTSI2.520e-9975.12Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q7_ECTSI1.270e-8783.75Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7S5_ECTSI3.240e-8480.12Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JWB4_9PHAE1.270e-8180.75LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5K8D0_9PHAE4.310e-8066.36LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G5B4_ECTSI5.390e-8061.95Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7FQG7_ECTSI5.690e-6959.62Light harvesting complex protein n=2 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig18contigP-fluviatile_contig18:495353..499070 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score345.5
Seed ortholog evalue2.7e-92
Seed eggNOG ortholog2880.D7G7S1
KEGG koko:K08914
KEGG Pathwayko00196,ko01100,map00196,map01100
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2BEWM@1,2S15M@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Hectar predicted targeting categoryother localisation
Exons4
Model size1684
Cds size966
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig18.3156.1prot_P-fluviatile_contig18.3156.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig18 496049..499048 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815755.013806-UTR-P-fluviatile_contig18:495352..4960481622815755.013806-UTR-P-fluviatile_contig18:495352..496048Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 495353..496048 -
1693563199.9793038-UTR-P-fluviatile_contig18:495352..4960481693563199.9793038-UTR-P-fluviatile_contig18:495352..496048Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 495353..496048 -
1622815755.0667448-UTR-P-fluviatile_contig18:499048..4990701622815755.0667448-UTR-P-fluviatile_contig18:499048..499070Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 499049..499070 -
1693563200.4743662-UTR-P-fluviatile_contig18:499048..4990701693563200.4743662-UTR-P-fluviatile_contig18:499048..499070Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 499049..499070 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815755.0247252-CDS-P-fluviatile_contig18:496048..4963241622815755.0247252-CDS-P-fluviatile_contig18:496048..496324Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 496049..496324 -
1693563200.1423626-CDS-P-fluviatile_contig18:496048..4963241693563200.1423626-CDS-P-fluviatile_contig18:496048..496324Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 496049..496324 -
1622815755.0340052-CDS-P-fluviatile_contig18:497061..4971451622815755.0340052-CDS-P-fluviatile_contig18:497061..497145Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 497062..497145 -
1693563200.4394338-CDS-P-fluviatile_contig18:497061..4971451693563200.4394338-CDS-P-fluviatile_contig18:497061..497145Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 497062..497145 -
1622815755.046202-CDS-P-fluviatile_contig18:498102..4982251622815755.046202-CDS-P-fluviatile_contig18:498102..498225Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 498103..498225 -
1693563200.4549603-CDS-P-fluviatile_contig18:498102..4982251693563200.4549603-CDS-P-fluviatile_contig18:498102..498225Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 498103..498225 -
1622815755.0562267-CDS-P-fluviatile_contig18:498565..4990481622815755.0562267-CDS-P-fluviatile_contig18:498565..499048Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 498566..499048 -
1693563200.4650216-CDS-P-fluviatile_contig18:498565..4990481693563200.4650216-CDS-P-fluviatile_contig18:498565..499048Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 498566..499048 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig18.3156.1

>prot_P-fluviatile_contig18.3156.1 ID=prot_P-fluviatile_contig18.3156.1|Name=mRNA_P-fluviatile_contig18.3156.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=322bp
MWLWASPTENPTQAMISTRYCTKLKLRPLSNNGPLGGKWIKIFQRIFRKD
PKSFVGGCSSQHLYSNLAASSLISFAASHTHKPKPLSPRIPNFGTPFSSS
LCAMIATRMLLFSTLIASATAFVAPTAVRSVAPAASSSSWKMSAGSDYVA
TLPGAPFPDGKIFDPLGLADGAEVGEIKLWREAEIKHGRVAMLAALGVLV
AEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYQTISKA
YAEPSAVTGEGGLKDDYTPGDLGFDPLGLKPKTEEDYNTMATKELNNGRL
AMIGIAGMLVQELVKPADILG*
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mRNA from alignment at P-fluviatile_contig18:495353..499070-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig18.3156.1 ID=mRNA_P-fluviatile_contig18.3156.1|Name=mRNA_P-fluviatile_contig18.3156.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3718bp|location=Sequence derived from alignment at P-fluviatile_contig18:495353..499070- (Porterinema fluviatile SAG_2381)
GGTGAACGTTGGGTCCCATCGAATGTGGTTGTGGGCAAGCCCGACGGAAA
ATCCAACGCAAGCGATGATTTCAACACGATATTGTACGAAGCTCAAGCTC
CGGCCACTTTCCAACAACGGCCCACTCGGAGGGAAATGGATTAAGATCTT
TCAGAGAATCTTTCGGAAGGATCCAAAATCTTTTGTCGGAGGCTGTTCAA
GTCAACATCTGTACTCGAATCTCGCCGCATCCTCTCTTATCTCGTTTGCT
GCTTCACACACTCACAAACCCAAACCTCTCTCTCCTCGAATTCCAAACTT
CGGCACTCCATTCTCTTCTTCACTGTGCGCCATGATTGCCACCCGGATGT
TGTTGTTTTCCACCCTCATCGCGTCGGCCACAGCCTTCGTCGCGCCGACA
GCCGTGCGGTCCGTCGCGCCCGCGGCGTCTTCGTCGAGCTGGAAGATGAG
CGCTGGATCGGACTACGTGGCCACCTTGCCCGGCGCCCCCTTCCCGGACG
GCAAGGTGAGCAGCAGAGTGTAGCGGGGCCTTTTGTCTGTGAGTCGATTG
AGAACTGCGTGCGATCTTATGTTTTCCCATGTCTAGTCCCCCTTGTTCTG
TGCATTTGTTCTGCTTTTGTCTGTTTCCGTGTGTGTCTGACGCGGCTTTT
TCGTGGGCTCACGTCATCTGCTGCCGCTGACTTATTAAATCGTTGGCATG
ACGATACCCTGTTGGAGTTAAAGTTAAAAAGGGCGCGGTGCACCACCAGC
CTTATCTATGTGTGCATCCCCTCTTTACTTGCCCGCTGACCGGCCAGTTT
CCCCCCCGCCACTCTTCGGTTTTCTCGTCGTTCGGCGGACCGAAGATTTT
CGACCCCCTTGGTCTTGCAGACGGCGCCGAAGTCGGAGAGATAAAGCTCT
GGCGCGAGGCCGAGATCAAGCACGGCCGAGTGGCCATGCTTGCTGCATTG
GGGGTTCTCGTCGCTGAGGTGAGATACAACTCCTGACACGCCAGAGCACT
GATCGGAGAAAGGCAGCGGTGTTACGCGCCTGCCTGCCTGTTCATTTATT
TTTTTGCGTCTTGCGGAGTATTTTGGGAACGCACACATTTGCGCACTGGA
TCTATTCCGTAATGCGTGATCATGCACACGTATGCATACTTTTGTTCGTA
CCTGGTTTATACTCTCGAACTGCGTTTTGATAAACATCTTCCCGGCGCGT
GTCTGGGGGAAAGGAAGAGAAAAACCGCGCACTCGTAGTCTTCATCCCGT
CCTCTCGAATACACTGCCGAGGTAAGCCCCGCTCACTTGTTGTCTTCTGC
CCACCAGCTTCCGGTCAACAGTTCCCGATCTAAAACTCGTCGATGCCTAT
GCAAGCGCGAGCGGAAACAAGCGGCGCAGACTGCGGCTTGTTTGGTTTTA
TGTAGGAATCCGCACTCTCACATCTCCAGTGCACGTGGCATGTACCCGAG
ATTATGCTGTAAGCATGGTAGCGCGTGAGCTTGGCAAGTCATGCGCTGCC
TCGACGGCGGGATATTGTCATCGCTGCTCCTGTCGTTGCCCCTTCTGACG
TGCTTCTTGCGCACTCTCACATCTCCAGTGCACGTGGCATATACCCGAGA
TTATGCTGTAAGCACGGTAGCACGTGAGCTTGGCAAGTCATGCGCTGCCT
CGACGGCGGGATATTGTCATCGCTGCTCCCGTCGTTGCCCCTTCTGACGT
GCTTCTTGCTGACGAACGACGGTGGTTGAACGCGAGGTCGAACTTCATCA
GGTGTAACCACTTCCTACCGATATCAACAACAAAAGCAAAGTGTTTATCC
TTCTTGCGCTTTGACAAGCCATGCAATCCAAATGCTGCACAAATAAAGTT
GATTGCCTGTCGCTCAGCTTCCTATTGCCTTCACCCCTGAACCTGCACGT
CGCTTGGGTTTTTGGCCTTCCGCAGGAGTATCACCCTTTCTTCATGGGGC
CTGACTACATCGGCCCCGCAGTAGACCACTTCCAGGAGATCAGCGCTCGG
TATCCCGAGGTGATAATGGGGAGGGGAGGAATGAATGACTGCACAGCGGC
AGATATACCAGGGGCACTCTGTTGAACCAGTCCGTCGGTCACGGGCAGAG
TAAAGTCGGAAATATACCCGCCGTTTGTGGATGTTGGCTCCATAAATGGA
AATCGTTTGCGCGGGACGTGGAGAGAAAATAAATGAACGGTTACTCGGGA
GTAATAAGAATGAATGGGCACTTTTCACCTCATTGTTTTTACCTGCAGGA
CGATGTCATTCAGGATAGCTTGTCAAGCTCTGCAGTTATGTTGTCTTCGA
ATGCCAAATTCATGCATCAGGTTACTGCCGTTGCATGCTCCGAGCTGGAG
ACGACCATGATGCAAAGGGTTTCTTAGAATTCGCCTACATGGTACCTGCA
GGGATTGTCACGTGCAACACGTGAAGGGAGTCGAAAGCGATCAATTGTTC
GGCTCAAGGCCTCTCCTATTGGGTAGCCACCGGGTGGATAACTGTTCTAA
CATAGAATTAGTGTGCCCCCCTGCCGCAGGGGAAAAGCCAAATAGTTTTG
CGGCAATGGTACAGTATCTTGTGCCCAATTTCGTCGCTGTACTGTGCTGC
TGTGCGCTCTCGGTCACTGCTAGTACGTCAGGTCATGTGTTTCCGCAGCT
CTGCCACGTTTTCAAGTCCTTCAACCGCCCTTTTATGCCCGAGTTTTAAG
CTTCCTCGATGCTTCTCATGACTTGCCTCCACTGACGTTTGCGCAGTTCT
GGGTGTTCTCCCTCCTGGGTATGGCCTTCATTGAGTACCAAACCATCAGC
AAGGCGTACGCGGAGCCCAGCGCCGTGACCGGCGAGGGCGGCCTTAAGGA
CGACTACACCCCCGGAGATCTCGGCTTCGACCCCCTCGGCCTCAAGCCCA
AGACGGAAGAGGACTACAATACCATGGCGACCAAGGAGCTTAACAACGGC
CGCCTGGCCATGATCGGCATCGCCGGCATGCTAGTGCAAGAGCTCGTCAA
GCCTGCCGACATCCTCGGCTAAACTGAAGTGAGCATTCGATCGCTGACGC
ACAGCAGCGCGAGGTGGATGGATAATAGCGTGCGGCAAGCCGGGTGACTG
ATGATCGACAATGCCGGCATCATTATTTTGCGCGAAAGAGTTCCACGTGC
AGGGAGCGAATAAGAAGGGATGAGAGATGTACAGCAGCGCTGAAGCGTGC
ACGCTTGTGCCGGTTGGAGTACGTGGTGAATGTTGATACAAAAAACGATG
GGCGTGCGTAACTTTGACGTATATTTTTTCTTGTTGTGGTGCGGTCGTGT
GTTTTCTGAGATTCAACGGGCGGTCGTCAAACGTTCTTGGTAACTCATAC
CGAAAATTACGGGTGCGAACTTTCCTTTTGTTGTCCGGAAGCGTCTTGTG
GCGCTTCCGTCAGGACACGTATACGCCTGGGACCTCGTTTTTCTTGCCCC
CTTTCCAAAGAACGTCGTAACCTTATCAAAGCTCCCGTTTTTCGACCAGT
GGGTGCGGACGTGCCATTTTTAACGTTTCCCCGGGTAATTTCAATTCCGA
CGTAGAGGTGCAGTTTTTGACGAGTCAGCAGGAGTTTCGTCGTTGAGCGT
GTTCGCCGGACGGGATGTGCCAGAGCCGTTGAACGAATTTTCGCAGCTGC
TCTTGGGTGTGAACACATCGAGCGCTTTCTGCAACACGAGGCCGAGAAAA
AAAAAATCTGTATACCTT
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Coding sequence (CDS) from alignment at P-fluviatile_contig18:495353..499070-

>mRNA_P-fluviatile_contig18.3156.1 ID=mRNA_P-fluviatile_contig18.3156.1|Name=mRNA_P-fluviatile_contig18.3156.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1932bp|location=Sequence derived from alignment at P-fluviatile_contig18:495353..499070- (Porterinema fluviatile SAG_2381)
ATGTGGTTGTGGGCAAGCCCGACGGAAAATCCAACGCAAGCGATGATTTC
AACACGATATTGTACGAAGCTCAAGCTCCGGCCACTTTCCAACAACGGCC
CACTCGGAGGGAAATGGATTAAGATCTTTCAGAGAATCTTTCGGAAGGAT
CCAAAATCTTTTGTCGGAGGCTGTTCAAGTCAACATCTGTACTCGAATCT
CGCCGCATCCTCTCTTATCTCGTTTGCTGCTTCACACACTCACAAACCCA
AACCTCTCTCTCCTCGAATTCCAAACTTCGGCACTCCATTCTCTTCTTCA
CTGTGCGCCATGATTGCCACCCGGATGTTGTTGTTTTCCACCCTCATCGC
GTCGGCCACAGCCTTCGTCGCGCCGACAGCCGTGCGGTCCGTCGCGCCCG
CGGCGTCTTCGTCGAGCTGGAAGATGAGCGCTGGATCGGACTACGTGGCC
ACCTTGCCCGGCGCCCCCTTCCCGGACGGCAAGATGTGGTTGTGGGCAAG
CCCGACGGAAAATCCAACGCAAGCGATGATTTCAACACGATATTGTACGA
AGCTCAAGCTCCGGCCACTTTCCAACAACGGCCCACTCGGAGGGAAATGG
ATTAAGATCTTTCAGAGAATCTTTCGGAAGGATCCAAAATCTTTTGTCGG
AGGCTGTTCAAGTCAACATCTGTACTCGAATCTCGCCGCATCCTCTCTTA
TCTCGTTTGCTGCTTCACACACTCACAAACCCAAACCTCTCTCTCCTCGA
ATTCCAAACTTCGGCACTCCATTCTCTTCTTCACTGTGCGCCATGATTGC
CACCCGGATGTTGTTGTTTTCCACCCTCATCGCGTCGGCCACAGCCTTCG
TCGCGCCGACAGCCGTGCGGTCCGTCGCGCCCGCGGCGTCTTCGTCGAGC
TGGAAGATGAGCGCTGGATCGGACTACGTGGCCACCTTGCCCGGCGCCCC
CTTCCCGGACGGCAAGATTTTCGACCCCCTTGGTCTTGCAGACGGCGCCG
AAGTCGGAGAGATAAAGCTCTGGCGCGAGGCCGAGATCAAGCACGGCCGA
GTGGCCATGCTTGCTGCATTGGGGGTTCTCGTCGCTGAGATTTTCGACCC
CCTTGGTCTTGCAGACGGCGCCGAAGTCGGAGAGATAAAGCTCTGGCGCG
AGGCCGAGATCAAGCACGGCCGAGTGGCCATGCTTGCTGCATTGGGGGTT
CTCGTCGCTGAGGAGTATCACCCTTTCTTCATGGGGCCTGACTACATCGG
CCCCGCAGTAGACCACTTCCAGGAGATCAGCGCTCGGTATCCCGAGGAGT
ATCACCCTTTCTTCATGGGGCCTGACTACATCGGCCCCGCAGTAGACCAC
TTCCAGGAGATCAGCGCTCGGTATCCCGAGTTCTGGGTGTTCTCCCTCCT
GGGTATGGCCTTCATTGAGTACCAAACCATCAGCAAGGCGTACGCGGAGC
CCAGCGCCGTGACCGGCGAGGGCGGCCTTAAGGACGACTACACCCCCGGA
GATCTCGGCTTCGACCCCCTCGGCCTCAAGCCCAAGACGGAAGAGGACTA
CAATACCATGGCGACCAAGGAGCTTAACAACGGCCGCCTGGCCATGATCG
GCATCGCCGGCATGCTAGTGCAAGAGCTCGTCAAGCCTGCCGACATCCTC
GGCTAATTCTGGGTGTTCTCCCTCCTGGGTATGGCCTTCATTGAGTACCA
AACCATCAGCAAGGCGTACGCGGAGCCCAGCGCCGTGACCGGCGAGGGCG
GCCTTAAGGACGACTACACCCCCGGAGATCTCGGCTTCGACCCCCTCGGC
CTCAAGCCCAAGACGGAAGAGGACTACAATACCATGGCGACCAAGGAGCT
TAACAACGGCCGCCTGGCCATGATCGGCATCGCCGGCATGCTAGTGCAAG
AGCTCGTCAAGCCTGCCGACATCCTCGGCTAA
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