prot_P-fluviatile_contig18.3145.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig18.3145.1
Unique Name	prot_P-fluviatile_contig18.3145.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	223

Homology

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BLAST of mRNA_P-fluviatile_contig18.3145.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 328 bits (840), Expect = 9.710e-112
Identity = 164/220 (74.55%), Postives = 188/220 (85.45%), Query Frame = 0

Query:    1 MVASKMLFVTSATLVASSTAFVAPIAVRSVAPAACPSGLKMSAGSDYVATLPGAPFSDGKVFDPLGFCDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEQFHPLFMGPNHIGPAVDHFQEISARFPAFWGLSIAVLAIIEFNTIQKAFAQPSFVTGEGDLKEEYSPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPATILG 220
            MVA+++   ++ATL+ASSTAFVAP+AVRS APA+  S LKMSAGSDYVATLPGAPF DGK+FDPL   DGA P +IKKWREAEIKHGRVAMLA+LGVLVAEQ+HPLFMGP++IGPAVDHFQEISA++P FW  S+  +A IE+NTI  AF  PS VTGEG LKE+Y PGDLGFDPLN+KP+ E AL+ MKTKELNNGRLAMIG AGMLVQEL+ PA ILG
Sbjct:    1 MVATQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220

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BLAST of mRNA_P-fluviatile_contig18.3145.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 1.430e-111
Identity = 166/221 (75.11%), Postives = 189/221 (85.52%), Query Frame = 0

Query:    1 MVASKMLFV-TSATLVASSTAFVAPIAVRSVAPAACPSGLKMSAGSDYVATLPGAPFSDGKVFDPLGFCDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEQFHPLFMGPNHIGPAVDHFQEISARFPAFWGLSIAVLAIIEFNTIQKAFAQPSFVTGEGDLKEEYSPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPATILG 220
            MVAS  +F+ T+ATL+ASSTAFVAP+AVRS APA+  S LKMSAGSDYVATLPGAPF DGK+FDPL   DGA P EIK WREAEIKHGRVAMLA +GV+VAEQ+HPLFMGP++IGPAVDHFQEISA+FP FW  S+  +A IE+NTI KA+A+PS VTGEG L++EYSPGDLGFDPLN+KPK +  L  M+TKELNNGRLAMIG AGMLVQELV PA ILG
Sbjct:    1 MVASSNMFLGTAATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221

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BLAST of mRNA_P-fluviatile_contig18.3145.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 2.900e-107
Identity = 161/219 (73.52%), Postives = 181/219 (82.65%), Query Frame = 0

Query:    1 MVASKMLFVTSATLVASSTAFVAPIAVRSVAPAACPSGLKMSAGSDYVATLPGAPFSDGKVFDPLGFCDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEQFHPLFMGPNHIGPAVDHFQEISARFPAFWGLSIAVLAIIEFNTIQKAFAQPSFVTGEGDLKEEYSPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPATIL 219
            MVAS+M   T+A L+ASSTAFVAP+AVRS APA+  S LKMSAGSDYVATLPGAPFSDGK+FDPL   DGAAP +IKKWREAEIKHGRVAMLA+LG+LVAE++HPLFMG + IGPA+ HFQEISA+FP FW  S+  +A IE+NTI  AF  PS VTGEG LKE+Y PGDLGFDPLN+KP  E AL+ MKTKELNNGRLAMIG AGML QELV    IL
Sbjct:    1 MVASQMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219

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BLAST of mRNA_P-fluviatile_contig18.3145.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 290 bits (742), Expect = 7.440e-97
Identity = 148/217 (68.20%), Postives = 173/217 (79.72%), Query Frame = 0

Query:    4 SKMLFVTSATLVASSTAFVAPIAVRSVAPAACPSGLKMSAGSDYVATLPGAPFSDGKVFDPLGFCDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEQFHPLFMGPNHIGPAVDHFQEISARFPAFWGLSIAVLAIIEFNTIQKAFAQPSFVTGEGDLKEEYSPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPATILG 220
            S M   T+ATL+ASS AFV P+AVRS APA+  S LKMSAG+DY+ATLPGA   +GK+FD L   DGA P EIK WREAEIKHGRVAMLA +GV+VAEQ+HP FMGP++IGPAVDHFQEI+A+FP FW  S+  +A IE+NTI+KA+A+PS VTGEG L++EYSPGDLGFDP  IKPK +  L  M+ KELNNGRLAMIG  GMLVQELV    ILG
Sbjct:    5 SNMFLGTAATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218

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BLAST of mRNA_P-fluviatile_contig18.3145.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 4.760e-87
Identity = 145/220 (65.91%), Postives = 159/220 (72.27%), Query Frame = 0

Query:    1 MVASKMLFVTSATLVASSTAFVAPIAVRSVAPAACPSGLKMSAGSDYVATLPGAPFSDGKVFDPLGFCDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEQFHPLFMGPNHIGPAVDHFQEISARFPAFWGLSIAVLAIIEFNTIQKAFAQPSFVTGEGDLKEEYSPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPATILG 220
            MVAS+M   T+ATL+ASSTAFVAP+AVRSV       GLKMSAGSDYVATLPGAPFSDGK+FDPLG  DGAAP +IKKWREAEIKHGRVAMLA+LGV+VAE                            FW  S+  +A IE+NTI  AF  PS VTGEG LKE+Y PGDLGFDPLN+KP  E AL+ MKTKELNNGRLAMIG AGML QELV PA ILG
Sbjct:    1 MVASQMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192

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BLAST of mRNA_P-fluviatile_contig18.3145.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 3.260e-84
Identity = 120/160 (75.00%), Postives = 137/160 (85.62%), Query Frame = 0

Query:   60 KVFDPLGFCDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEQFHPLFMGPNHIGPAVDHFQEISARFPAFWGLSIAVLAIIEFNTIQKAFAQPSFVTGEGDLKEEYSPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPATIL 219
            K+FDPLG  DGA   +IK WREAEIKHGRVAMLA+LGVLVAE++HP FMGP++IGPAVDHFQEISARFP FW  S+  LA+IE+NTI KA+A+PSFVTGEG L++EYSPGDLGFDPLN+KP  + AL TM+TKELNNGRLAMIG AG LVQELV P  IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174

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BLAST of mRNA_P-fluviatile_contig18.3145.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 2.430e-83
Identity = 120/161 (74.53%), Postives = 136/161 (84.47%), Query Frame = 0

Query:   60 KVFDPLGFCDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEQFHPLFMGPNHIGPAVDHFQEISARFPAFWGLSIAVLAIIEFNTIQKAFAQPSFVTGEGDLKEEYSPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPATILG 220
            ++FDPLG  DGAAP +IKKWREAEIKHGRVAMLA+LGV+VAEQ+HP FMGP++IGPAVDHFQEISA+FP FW  S+  +A +E+NTI  AF  PS VTGEG LKE+Y PGDLGFDPLN+KP  E AL+ MKTKELNNGRLAMIG AGML QELV PA ILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196

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BLAST of mRNA_P-fluviatile_contig18.3145.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 5.830e-82
Identity = 118/181 (65.19%), Postives = 147/181 (81.22%), Query Frame = 0

Query:   40 KMSAGSDYVATLPGAPFSDGKVFDPLGFCDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEQFHPLFMGPNHIGPAVDHFQEISARFPAFWGLSIAVLAIIEFNTIQKAFAQPSFVTGEGDLKEEYSPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPATILG 220
            +MSAGSDYV+TLPGAPF+DGKV+DP+G    A P++IKKWREAEIKHGRVAMLA++GVLVAE FHPLF+GP++IGPA+ HF+EI+ARFP FW L++  +A +E+  I   FA+   VTGEG ++ +Y PGDLGFDPL + P+ E  LN MKTKELN+GRLAMIG  GM+VQELV+P  I G
Sbjct:   91 RMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271

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BLAST of mRNA_P-fluviatile_contig18.3145.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 6.020e-81
Identity = 121/161 (75.16%), Postives = 136/161 (84.47%), Query Frame = 0

Query:   60 KVFDPLGFCDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEQFHPLFMGPNHIGPAVDHFQEISARFPAFWGLSIAVLAIIEFNTIQKAFAQPSFVTGEGDLKEEYSPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPATILG 220
            ++FDPLG  DGAAP +IKKWREAEIKHGRVAMLA+LGV+VAEQ+HP FMGP++IGPAVDHFQEISA+FP FW  S+  +A IE+NTI  AF  PS VTGEG LKE+Y PGDLGFDPLN+KP  E AL+ MKTKELNNGRLAMIG AGML QELV PA ILG
Sbjct:  232 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392

[Close]

BLAST of mRNA_P-fluviatile_contig18.3145.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 3.500e-74
Identity = 125/224 (55.80%), Postives = 160/224 (71.43%), Query Frame = 0

Query:    1 MVASKMLFVTSATLVASSTAFVAPIAV--RSVAPAACPSGLKMSAGSDYVATLPGAPF---SDGKVFDPLGFCDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEQFHPLFMGPNHIGPAVDHFQEISARFPAFWGLSIAVLAIIEFNTIQKAFAQPSFVTGEGDLKEEYSPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPATIL 219
            MV S++   T+ATL+ASS AFVAPIA    S+A  A  S  KM+AGSDY A+LPGAPF   ++GK FDP G      P+ IKKWREAE+KHGRV+MLAA+G+LV+E FHPLFMGP +IGPAV+H Q+I+  +P FW  S+ ++A IE  TI+ A+   S VTG G+LK EY PGDLGFDPL + PK  +    ++++EL+ GR AMIG  GM+VQE+V    IL
Sbjct:    1 MVTSQLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig18.3145.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig18.3145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7Q6_ECTSI	9.710e-112	74.55	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7S1_ECTSI	1.430e-111	75.11	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7Q9_ECTSI	2.900e-107	73.52	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7S0_ECTSI	7.440e-97	68.20	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
A0A6H5K8D0_9PHAE	4.760e-87	65.91	LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A...	[more]
D7G7Q7_ECTSI	3.260e-84	75.00	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7S5_ECTSI	2.430e-83	74.53	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G5B4_ECTSI	5.830e-82	65.19	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
A0A6H5JWB4_9PHAE	6.020e-81	75.16	LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
D7FQG7_ECTSI	3.500e-74	55.80	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 37..222 e-value: 1.7E-38 score: 134.2
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 51..211 e-value: 2.4E-37 score: 129.0
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 9..214
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 9..214
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 18..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..222
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..20 score: 0.61
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 58..220

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig18	contig	P-fluviatile_contig18:408263..410293 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig18.3145.1	mRNA_P-fluviatile_contig18.3145.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig18 407253..410726 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig18.3145.1 ID=prot_P-fluviatile_contig18.3145.1|Name=mRNA_P-fluviatile_contig18.3145.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=223bp
MVASKMLFVTSATLVASSTAFVAPIAVRSVAPAACPSGLKMSAGSDYVAT
LPGAPFSDGKVFDPLGFCDGAAPKEIKKWREAEIKHGRVAMLAALGVLVA
EQFHPLFMGPNHIGPAVDHFQEISARFPAFWGLSIAVLAIIEFNTIQKAF
AQPSFVTGEGDLKEEYSPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLA
MIGAAGMLVQELVKPATILGDM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind
IPR001344	Chloro_AB-bd_pln