prot_P-fluviatile_contig18.3143.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig18.3143.1
Unique Name	prot_P-fluviatile_contig18.3143.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	221

Homology

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BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 3.290e-114
Identity = 167/220 (75.91%), Postives = 189/220 (85.91%), Query Frame = 0

Query:    1 MFGTQMFLATATTLIVSSTAFVAPMAVRPVAPAASSTSLKMSAGSDYVATLPGAPFPDGKVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPILG 220
            M  TQ+FL +A TLI SSTAFVAPMAVR  APA+SS++LKMSAGSDYVATLPGAPF DGK+FDPL  SDGA P +IKKWREAEIKHGRVAMLA+LGVLVAE++HPLFMGP+YIGPAVDHFQEISA++P FW  S+  +A IE+NTI  AF  PS VTGEG L+E+Y PGDLGFDPLN+KP+ E AL+ MKTKELNNGRLAMIG AGMLVQEL+ PA ILG
Sbjct:    1 MVATQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220

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BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 330 bits (847), Expect = 7.990e-113
Identity = 165/218 (75.69%), Postives = 187/218 (85.78%), Query Frame = 0

Query:    3 GTQMFLATATTLIVSSTAFVAPMAVRPVAPAASSTSLKMSAGSDYVATLPGAPFPDGKVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPILG 220
             + MFL TA TLI SSTAFVAPMAVR  APA+S+++LKMSAGSDYVATLPGAPF DGK+FDPL  SDGA P EIK WREAEIKHGRVAMLA +GV+VAE++HPLFMGP+YIGPAVDHFQEISA+FP FW  S+  +A IE+NTI KA+A+PS VTGEG LR+EY+PGDLGFDPLN+KPK +  L  M+TKELNNGRLAMIG AGMLVQELV PA ILG
Sbjct:    4 SSNMFLGTAATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221

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BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 314 bits (805), Expect = 2.190e-106
Identity = 158/219 (72.15%), Postives = 182/219 (83.11%), Query Frame = 0

Query:    1 MFGTQMFLATATTLIVSSTAFVAPMAVRPVAPAASSTSLKMSAGSDYVATLPGAPFPDGKVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPIL 219
            M  +QMFL TA  LI SSTAFVAP+AVR  APA+++++LKMSAGSDYVATLPGAPF DGK+FDPL  SDGAAP +IKKWREAEIKHGRVAMLA+LG+LVAE++HPLFMG ++IGPA+ HFQEISA+FP FW  S+  +A IE+NTI  AF  PS VTGEG L+E+Y PGDLGFDPLN+KP  E AL+ MKTKELNNGRLAMIG AGML QELV    IL
Sbjct:    1 MVASQMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219

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BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 2.070e-98
Identity = 149/218 (68.35%), Postives = 176/218 (80.73%), Query Frame = 0

Query:    3 GTQMFLATATTLIVSSTAFVAPMAVRPVAPAASSTSLKMSAGSDYVATLPGAPFPDGKVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPILG 220
             + MFL TA TLI SS AFV PMAVR  APA+S+++LKMSAG+DY+ATLPGA   +GK+FD L  +DGA P EIK WREAEIKHGRVAMLA +GV+VAE++HP FMGP+YIGPAVDHFQEI+A+FP FW  S+  +A IE+NTI+KA+A+PS VTGEG LR+EY+PGDLGFDP  IKPK +  L  M+ KELNNGRLAMIG  GMLVQELV    ILG
Sbjct:    4 SSNMFLGTAATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218

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BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 262 bits (670), Expect = 2.540e-86
Identity = 144/220 (65.45%), Postives = 157/220 (71.36%), Query Frame = 0

Query:    1 MFGTQMFLATATTLIVSSTAFVAPMAVRPVAPAASSTSLKMSAGSDYVATLPGAPFPDGKVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPILG 220
            M  +QMF+ TA TLI SSTAFVAPMAVR V    SS  LKMSAGSDYVATLPGAPF DGK+FDPLG SDGAAP +IKKWREAEIKHGRVAMLA+LGV+VAE                            FW  S+  +A IE+NTI  AF  PS VTGEG L+E+Y PGDLGFDPLN+KP  E AL+ MKTKELNNGRLAMIG AGML QELV PA ILG
Sbjct:    1 MVASQMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192

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BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 3.060e-86
Identity = 124/185 (67.03%), Postives = 151/185 (81.62%), Query Frame = 0

Query:   36 STSLKMSAGSDYVATLPGAPFPDGKVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPILG 220
            ST+ +MSAGSDYV+TLPGAPF DGKV+DP+G S  A P++IKKWREAEIKHGRVAMLA++GVLVAE FHPLF+GP+YIGPA+ HF+EI+ARFP FW L++  +A +E+  I   FA+   VTGEG +R +Y PGDLGFDPL + P+ E  LN MKTKELN+GRLAMIG  GM+VQELV+P PI G
Sbjct:   87 STAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271

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BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 1.060e-84
Identity = 121/160 (75.62%), Postives = 138/160 (86.25%), Query Frame = 0

Query:   60 KVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPIL 219
            K+FDPLG +DGA   +IK WREAEIKHGRVAMLA+LGVLVAE++HP FMGP+YIGPAVDHFQEISARFP FW  S+  LA+IE+NTI KA+A+PSFVTGEG LR+EY+PGDLGFDPLN+KP  + AL TM+TKELNNGRLAMIG AG LVQELV P  IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174

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BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 5.550e-84
Identity = 120/161 (74.53%), Postives = 137/161 (85.09%), Query Frame = 0

Query:   60 KVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPILG 220
            ++FDPLG SDGAAP +IKKWREAEIKHGRVAMLA+LGV+VAE++HP FMGP+YIGPAVDHFQEISA+FP FW  S+  +A +E+NTI  AF  PS VTGEG L+E+Y PGDLGFDPLN+KP  E AL+ MKTKELNNGRLAMIG AGML QELV PA ILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196

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BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 1.970e-81
Identity = 121/161 (75.16%), Postives = 137/161 (85.09%), Query Frame = 0

Query:   60 KVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPILG 220
            ++FDPLG SDGAAP +IKKWREAEIKHGRVAMLA+LGV+VAE++HP FMGP+YIGPAVDHFQEISA+FP FW  S+  +A IE+NTI  AF  PS VTGEG L+E+Y PGDLGFDPLN+KP  E AL+ MKTKELNNGRLAMIG AGML QELV PA ILG
Sbjct:  232 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392

[Close]

BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 2.290e-74
Identity = 124/224 (55.36%), Postives = 161/224 (71.88%), Query Frame = 0

Query:    1 MFGTQMFLATATTLIVSSTAFVAPMAV--RPVAPAASSTSLKMSAGSDYVATLPGAPF---PDGKVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPIL 219
            M  +Q+FL TA TLI SS AFVAP+A     +A  A+S++ KM+AGSDY A+LPGAPF    +GK FDP G +    P+ IKKWREAE+KHGRV+MLAA+G+LV+E FHPLFMGP YIGPAV+H Q+I+  +P FW  S+ ++A IE  TI+ A+   S VTG G+L+ EY PGDLGFDPL + PK  +    ++++EL+ GR AMIG  GM+VQE+V    IL
Sbjct:    1 MVTSQLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7Q6_ECTSI	3.290e-114	75.91	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7S1_ECTSI	7.990e-113	75.69	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7Q9_ECTSI	2.190e-106	72.15	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7S0_ECTSI	2.070e-98	68.35	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
A0A6H5K8D0_9PHAE	2.540e-86	65.45	LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A...	[more]
D7G5B4_ECTSI	3.060e-86	67.03	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7Q7_ECTSI	1.060e-84	75.63	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7S5_ECTSI	5.550e-84	74.53	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
A0A6H5JWB4_9PHAE	1.970e-81	75.16	LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
D7FQG7_ECTSI	2.290e-74	55.36	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 40..219 e-value: 2.6E-38 score: 133.6
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 50..211 e-value: 7.9E-38 score: 130.5
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 9..217
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 9..217
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 34..220
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..33
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..33
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..15
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..20 score: 0.61
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 51..219

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig18	contig	P-fluviatile_contig18:374283..377289 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig18.3143.1	mRNA_P-fluviatile_contig18.3143.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig18 374243..378193 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig18.3143.1 ID=prot_P-fluviatile_contig18.3143.1|Name=mRNA_P-fluviatile_contig18.3143.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=221bp
MFGTQMFLATATTLIVSSTAFVAPMAVRPVAPAASSTSLKMSAGSDYVAT
LPGAPFPDGKVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVA
EKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAF
AQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLA
MIGAAGMLVQELVKPAPILG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind
IPR001344	Chloro_AB-bd_pln