mRNA_P-fluviatile_contig18.3143.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig18.3143.1
Unique NamemRNA_P-fluviatile_contig18.3143.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 335 bits (858), Expect = 1.020e-109
Identity = 167/220 (75.91%), Postives = 189/220 (85.91%), Query Frame = 2 
Query:   41 MFGTQMFLATATTLIVSSTAFVAPMAVRPVAPAASSTSLKMSAGSDYVATLPGAPFPDGKVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPILG 700
            M  TQ+FL +A TLI SSTAFVAPMAVR  APA+SS++LKMSAGSDYVATLPGAPF DGK+FDPL  SDGA P +IKKWREAEIKHGRVAMLA+LGVLVAE++HPLFMGP+YIGPAVDHFQEISA++P FW  S+  +A IE+NTI  AF  PS VTGEG L+E+Y PGDLGFDPLN+KP+ E AL+ MKTKELNNGRLAMIG AGMLVQEL+ PA ILG
Sbjct:    1 MVATQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220
[Close]
BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 330 bits (847), Expect = 4.820e-108
Identity = 165/215 (76.74%), Postives = 186/215 (86.51%), Query Frame = 2 
Query:   56 MFLATATTLIVSSTAFVAPMAVRPVAPAASSTSLKMSAGSDYVATLPGAPFPDGKVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPILG 700
            MFL TA TLI SSTAFVAPMAVR  APA+S+++LKMSAGSDYVATLPGAPF DGK+FDPL  SDGA P EIK WREAEIKHGRVAMLA +GV+VAE++HPLFMGP+YIGPAVDHFQEISA+FP FW  S+  +A IE+NTI KA+A+PS VTGEG LR+EY+PGDLGFDPLN+KPK +  L  M+TKELNNGRLAMIG AGMLVQELV PA ILG
Sbjct:    7 MFLGTAATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221
[Close]
BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 5.660e-102
Identity = 158/219 (72.15%), Postives = 182/219 (83.11%), Query Frame = 2 
Query:   41 MFGTQMFLATATTLIVSSTAFVAPMAVRPVAPAASSTSLKMSAGSDYVATLPGAPFPDGKVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPIL 697
            M  +QMFL TA  LI SSTAFVAP+AVR  APA+++++LKMSAGSDYVATLPGAPF DGK+FDPL  SDGAAP +IKKWREAEIKHGRVAMLA+LG+LVAE++HPLFMG ++IGPA+ HFQEISA+FP FW  S+  +A IE+NTI  AF  PS VTGEG L+E+Y PGDLGFDPLN+KP  E AL+ MKTKELNNGRLAMIG AGML QELV    IL
Sbjct:    1 MVASQMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219
[Close]
BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 8.560e-94
Identity = 149/215 (69.30%), Postives = 175/215 (81.40%), Query Frame = 2 
Query:   56 MFLATATTLIVSSTAFVAPMAVRPVAPAASSTSLKMSAGSDYVATLPGAPFPDGKVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPILG 700
            MFL TA TLI SS AFV PMAVR  APA+S+++LKMSAG+DY+ATLPGA   +GK+FD L  +DGA P EIK WREAEIKHGRVAMLA +GV+VAE++HP FMGP+YIGPAVDHFQEI+A+FP FW  S+  +A IE+NTI+KA+A+PS VTGEG LR+EY+PGDLGFDP  IKPK +  L  M+ KELNNGRLAMIG  GMLVQELV    ILG
Sbjct:    7 MFLGTAATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218
[Close]
BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 3.480e-82
Identity = 144/220 (65.45%), Postives = 157/220 (71.36%), Query Frame = 2 
Query:   41 MFGTQMFLATATTLIVSSTAFVAPMAVRPVAPAASSTSLKMSAGSDYVATLPGAPFPDGKVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPILG 700
            M  +QMF+ TA TLI SSTAFVAPMAVR V    SS  LKMSAGSDYVATLPGAPF DGK+FDPLG SDGAAP +IKKWREAEIKHGRVAMLA+LGV+VAE                            FW  S+  +A IE+NTI  AF  PS VTGEG L+E+Y PGDLGFDPLN+KP  E AL+ MKTKELNNGRLAMIG AGML QELV PA ILG
Sbjct:    1 MVASQMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192
[Close]
BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 1.230e-81
Identity = 124/185 (67.03%), Postives = 151/185 (81.62%), Query Frame = 2 
Query:  146 STSLKMSAGSDYVATLPGAPFPDGKVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPILG 700
            ST+ +MSAGSDYV+TLPGAPF DGKV+DP+G S  A P++IKKWREAEIKHGRVAMLA++GVLVAE FHPLF+GP+YIGPA+ HF+EI+ARFP FW L++  +A +E+  I   FA+   VTGEG +R +Y PGDLGFDPL + P+ E  LN MKTKELN+GRLAMIG  GM+VQELV+P PI G
Sbjct:   87 STAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271
[Close]
BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 3.800e-80
Identity = 121/160 (75.62%), Postives = 138/160 (86.25%), Query Frame = 2 
Query:  218 KVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPIL 697
            K+FDPLG +DGA   +IK WREAEIKHGRVAMLA+LGVLVAE++HP FMGP+YIGPAVDHFQEISARFP FW  S+  LA+IE+NTI KA+A+PSFVTGEG LR+EY+PGDLGFDPLN+KP  + AL TM+TKELNNGRLAMIG AG LVQELV P  IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174
[Close]
BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 1.960e-79
Identity = 120/161 (74.53%), Postives = 137/161 (85.09%), Query Frame = 2 
Query:  218 KVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPILG 700
            ++FDPLG SDGAAP +IKKWREAEIKHGRVAMLA+LGV+VAE++HP FMGP+YIGPAVDHFQEISA+FP FW  S+  +A +E+NTI  AF  PS VTGEG L+E+Y PGDLGFDPLN+KP  E AL+ MKTKELNNGRLAMIG AGML QELV PA ILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196
[Close]
BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 6.990e-77
Identity = 121/161 (75.16%), Postives = 137/161 (85.09%), Query Frame = 2 
Query:  218 KVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPILG 700
            ++FDPLG SDGAAP +IKKWREAEIKHGRVAMLA+LGV+VAE++HP FMGP+YIGPAVDHFQEISA+FP FW  S+  +A IE+NTI  AF  PS VTGEG L+E+Y PGDLGFDPLN+KP  E AL+ MKTKELNNGRLAMIG AGML QELV PA ILG
Sbjct:  232 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392
[Close]
BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 1.960e-70
Identity = 124/224 (55.36%), Postives = 161/224 (71.88%), Query Frame = 2 
Query:   41 MFGTQMFLATATTLIVSSTAFVAPMAV--RPVAPAASSTSLKMSAGSDYVATLPGAPF---PDGKVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVAEKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAFAQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLAMIGAAGMLVQELVKPAPIL 697
            M  +Q+FL TA TLI SS AFVAP+A     +A  A+S++ KM+AGSDY A+LPGAPF    +GK FDP G +    P+ IKKWREAE+KHGRV+MLAA+G+LV+E FHPLFMGP YIGPAV+H Q+I+  +P FW  S+ ++A IE  TI+ A+   S VTG G+L+ EY PGDLGFDPL + PK  +    ++++EL+ GR AMIG  GM+VQE+V    IL
Sbjct:    1 MVTSQLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7Q6_ECTSI1.020e-10975.91Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S1_ECTSI4.820e-10876.74Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI5.660e-10272.15Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S0_ECTSI8.560e-9469.30Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5K8D0_9PHAE3.480e-8265.45LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G5B4_ECTSI1.230e-8167.03Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q7_ECTSI3.800e-8075.63Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7S5_ECTSI1.960e-7974.53Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JWB4_9PHAE6.990e-7775.16LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FQG7_ECTSI1.960e-7055.36Light harvesting complex protein n=2 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig18contigP-fluviatile_contig18:374243..378193 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score339.0
Seed ortholog evalue1.7e-90
Seed eggNOG ortholog2880.D7G7S3
KEGG koko:K08914
KEGG Pathwayko00196,ko01100,map00196,map01100
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2BEWM@1,2S15M@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Hectar predicted targeting categorychloroplast
Exons4
Model size1607
Cds size663
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig18.3143.1prot_P-fluviatile_contig18.3143.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig18 374283..377289 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815753.3878279-UTR-P-fluviatile_contig18:374242..3742821622815753.3878279-UTR-P-fluviatile_contig18:374242..374282Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 374243..374282 +
1693563189.6841266-UTR-P-fluviatile_contig18:374242..3742821693563189.6841266-UTR-P-fluviatile_contig18:374242..374282Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 374243..374282 +
1622815753.4627512-UTR-P-fluviatile_contig18:377289..3781931622815753.4627512-UTR-P-fluviatile_contig18:377289..378193Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 377290..378193 +
1693563189.7421224-UTR-P-fluviatile_contig18:377289..3781931693563189.7421224-UTR-P-fluviatile_contig18:377289..378193Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 377290..378193 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815753.4050725-CDS-P-fluviatile_contig18:374282..3744621622815753.4050725-CDS-P-fluviatile_contig18:374282..374462Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 374283..374462 +
1693563189.7013695-CDS-P-fluviatile_contig18:374282..3744621693563189.7013695-CDS-P-fluviatile_contig18:374282..374462Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 374283..374462 +
1622815753.4205437-CDS-P-fluviatile_contig18:374782..3749051622815753.4205437-CDS-P-fluviatile_contig18:374782..374905Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 374783..374905 +
1693563189.7147994-CDS-P-fluviatile_contig18:374782..3749051693563189.7147994-CDS-P-fluviatile_contig18:374782..374905Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 374783..374905 +
1622815753.4332185-CDS-P-fluviatile_contig18:376442..3765261622815753.4332185-CDS-P-fluviatile_contig18:376442..376526Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 376443..376526 +
1693563189.725518-CDS-P-fluviatile_contig18:376442..3765261693563189.725518-CDS-P-fluviatile_contig18:376442..376526Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 376443..376526 +
1622815753.44741-CDS-P-fluviatile_contig18:377013..3772891622815753.44741-CDS-P-fluviatile_contig18:377013..377289Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 377014..377289 +
1693563189.7337785-CDS-P-fluviatile_contig18:377013..3772891693563189.7337785-CDS-P-fluviatile_contig18:377013..377289Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 377014..377289 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig18.3143.1

>prot_P-fluviatile_contig18.3143.1 ID=prot_P-fluviatile_contig18.3143.1|Name=mRNA_P-fluviatile_contig18.3143.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=221bp
MFGTQMFLATATTLIVSSTAFVAPMAVRPVAPAASSTSLKMSAGSDYVAT
LPGAPFPDGKVFDPLGFSDGAAPKEIKKWREAEIKHGRVAMLAALGVLVA
EKFHPLFMGPNYIGPAVDHFQEISARFPAFWGLSIAILAVIEFNTIQKAF
AQPSFVTGEGDLREEYTPGDLGFDPLNIKPKTEDALNTMKTKELNNGRLA
MIGAAGMLVQELVKPAPILG*
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mRNA from alignment at P-fluviatile_contig18:374243..378193+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig18.3143.1 ID=mRNA_P-fluviatile_contig18.3143.1|Name=mRNA_P-fluviatile_contig18.3143.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3951bp|location=Sequence derived from alignment at P-fluviatile_contig18:374243..378193+ (Porterinema fluviatile SAG_2381)
TCCTCCTTCAAGTATCTACTCGACATTACGCCAAGCAAAGATGTTCGGCA
CCCAGATGTTCCTCGCCACCGCCACCACCCTAATCGTCTCGTCCACGGCA
TTCGTAGCGCCCATGGCTGTGCGACCCGTCGCGCCCGCCGCGTCCTCGAC
GAGCCTGAAAATGAGCGCTGGATCGGATTACGTTGCAACCCTGCCCGGTG
CTCCTTTCCCCGATGGCAAGGTGGGTTAGTGCCGTCAAGCACTGGTAATA
ATACGCCGTCATTGATGTATCTGTCCCAAAAACTCCCGATGGTCGTTCTA
GTAGGCAGTCTCGGAGGGGGGCGCGGAACATCAAACGGCCGCAGCGTGTT
CGAAAGTGATGGTGAGCCTCTCGCCCATGATTCATTCAACACGCGCCCAT
CGCGTACGATTGATCTCAGATTGCGTTTTGGTGGCACCTGGCATGTCGTC
ACAGCCCGCCGTCTTTTGGTCGCCCACTCGGCCCTCGCCTGATTTGATCT
ACGCTCACGCTCTAAAGTATTGTTTTGTCTGTTCCACCAGGTTTTCGACC
CGCTCGGCTTTAGCGACGGTGCTGCCCCGAAGGAGATCAAAAAGTGGCGC
GAGGCCGAGATCAAGCACGGCCGCGTTGCCATGCTCGCGGCACTGGGTGT
CCTCGTGGCCGAGGTAAGGGGGCACACACGTGCACCATTCGAACGTTGCT
TATCGTGGCGGAGCTTACTATCTTTCACTAGCCTTGCGTTCTACCGCGTA
CGGACCTATATATAGCTTGGAAAAATTGCGGGAAGCGGGACTGTGTTAGC
TCTCCTTGTCGCTCCTGACGGTCTCCATCGATGTGGCCGCACTCTTATGG
GTCTGCGCGTCCTTGTTATACTCAGGATGCTTGGGCTTCGTGCTGAAGAT
GACCCCCGATTGTCCCTTGGGGAGGGCGCTTGGTTGTTGGAGGCCCCATG
TACAAAGAATCACCGTTGATGAGTTTTGATTTCTTCAATTTGCACTTTTT
CACCACCCGGGTGGTACTCCGTGGGGGGCAGATGTGCAGCGATGGGTCTG
ATATACCTTGTGTATACGGTAACTTCCATTCTAATGGAAACTCTTGTGCC
AATTAACTAGTACACGGAGAGGCGAACATCACCAGCAGCATTCACTATTC
ACCTTATCCAGCCGCTTTGGTACCTCAATATCCACCTCCATCCACAGTCG
AAATTGACTTCTATGAACGACAGTAACGGGTTCATCTTGGACAGCGTAAA
CCCCTCTCAGGAGTTGGCTCCACTTTGTCACTGAATTTCAGATGCTATGC
GCTTAGTCTCGCACGAGGTGGGTCTTTCTTGGCAGAGGATATCACGGAGC
ACCAATACGTGTGCTGGCAAGATGAGGATTTCTGCAGAGCCTTCAAAATG
GAAGGCCGCAGTAGAGGCTATTATTGTCCGCGATCTGCGCTCACGACCAA
CATCCTCCACTGCTGTTTGGGCCGCCACGGGCACACATCTTGGGAACTAC
GGATCATCCGAGGCAGCTAGAAGCACGAGCTGCAGCTCTAGCTACCGCCG
ATCTGGAGGTTGAGATTCTCAGCTGCATATACACCACTGGAAAATGTCGG
ATGTAGGTCCAGTTTGCGGACATTGAGCCGCTGCTGTGGCCTACGATGTC
TAACTCCTTGGCAATCCTGAGCGCGTCAGTACGCGTACGGGTGCCCCATG
ATGTCTACTAGTAAACGACCTTGGTATGAGGATCCCCCCAAAAAATCAAG
GTGTGAGATCCTTGACCATTCAGGCTGTTTTAACTTGATGACAGATAAGA
GGAATTTTTCAAGGCTACCAAGGAAAAGATTGGACGTAGGCTGTGTGATA
TGCATGTGAAGAAGAGCCCCTGCCACCGCTCTGGCGTTCATCAACGTTTC
ATTCGTCGTCCAATGCCTGTGGAAGGGTACTCACAGTGTATTAACTTGTT
GGATGTTGATTTCCTATTTGGGAACGTCATTCAACTAAAAAACTCGGTTG
ACCCTCCCCCATCAACGAACTCAATGGCTATTCCCCCCGGACAGGCAGCT
TGTTTCACCGATTGATGTCCGCCGTACGCGAACAAGTCCGGAATCTTGAC
GCACATCTAGCTACATTTGTTCACACCTCTAACGATCATCTGACCAATTG
CCATACACGCGCCTCTTTCGCTGTCGACACTGTGACAATATCCTTTCCAG
AAATTCCACCCTCTCTTCATGGGCCCTAATTACATCGGCCCTGCCGTGGA
CCACTTTCAGGAGATCAGCGCTCGGTTCCCAGCGGTGAGGATCTATTCTT
AACCCGAGTGCAAAGGGTTATGCTTGAGGTGATTACTATGACGCCGTGCC
ACTACCCTACGGTTGTTAATGTCACCCACGGGCAGTTTTTGTGACGCGAT
GATACTCCTGCTGCCTGTGTACTGCGCATCAACGCGCCACGACCTGACCT
TGTAGAATACACTATCCGAACTCATGTGACGGGAGTGTTCCTGGTTGCAG
TGTGCAGGTGGCGCGGGATTTGTGAAGATCGGTCAAAATCGTGAGATGTG
GCAAGTGTCAAATGCGAAGGAACAGGTACCTGGGGATGTCCTACTATACA
GCAGCTTAGCTGATATGCGGGCATACGTGATGAATTCCGTGTGCAGCGTG
GGCAGAGTCGTCGTTGGAATCGCTGCAAACGCTGCCACCGCTACGAAATA
ATTCGGATGCCAAACTTGACGCGCTACCATCCCTCTTTTCCTTGACCGGC
TGTGCCGACCGACTCTCGCAGTTCTGGGGACTCTCCATCGCTATCTTGGC
CGTCATCGAGTTCAACACGATCCAGAAAGCCTTTGCCCAGCCCAGCTTCG
TAACTGGCGAGGGTGACCTCAGGGAAGAATACACCCCTGGAGACCTCGGC
TTCGACCCCCTCAACATCAAGCCCAAGACCGAGGACGCTCTCAACACGAT
GAAGACGAAAGAACTCAACAACGGCCGCCTGGCCATGATCGGCGCCGCCG
GCATGTTGGTGCAAGAGCTCGTAAAGCCGGCTCCCATCCTCGGCTAGGTT
CTTGAAAGCGATGCGCTAGTCAAAAGTGCCGAAGGCGTAAGACTACGGGT
CGGAAGGGGCCGTGAGAATCTCGGTACAGACTTGTGGGCGTGTGGAGTTT
TGGGGAATGAATACTCCCCATCTCGAAGACGCCGATTTCCACGAGGGTAC
GTGCTGGCAGAGTAGCGCACGTCGTGCCGTTGACTTGTGCAAACTGTTGT
GGCAGTTGTTGTTTTTGTGTAGTACTGCGTGACGAACATGCATCATCGTG
CCATTTGCCGCAGTGGTGGTGGTGTTTTTGGCGGTGGTGGTGTTTTTGTT
CAGCAGCATTGGTGTTGCTTATACCGTCGTGTCTTTTGCTTTGCTTTCGT
CGGCTCGACCAATTTTGTTTGACGTCTCTTGACCATCACCAGGCCACCAT
GTTGACACTTTCACCTTCATGTTTTGAACGCATTCCCCTTGCATGCTGTT
CACGGGCCTGCGTCTTGTTTGGCGTTCTAGCCGGCGCGTATACCATCGTT
CCGTAGCTTCCATAGCTGATTTTTCTCGAGACACAAGAGTCTACATCCTG
AACAAATTGCTAAATTTTACAAACGTCGAACTGATAGGAAGTCGTCCTCG
TGGTGACACCTAATAATGTGAAGGACTGTCACTGTTCGTCGCAAGGTAGA
GCAAAGTGTTTTCAATGTGCGCTGTCGCCGAACTATTGATAGGTGCGACA
AGGTTCTACGCATTTTTTCCCCTGAAACTTCACGAGTGTACGTATCACCT
CGCTTGGTTTTATCACAAAAAGTGTGTCGGGCGAGATGTATTTCTTCAAA
GAGGGCTCCGCGAAAATGAAATACCTGCGTTGTCTAACTTTGGTTCAGCC
CAAAGAAAAACAACGATCGGACAAAATGTCGGGTGAGTCACATGTCTGGA
A
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Coding sequence (CDS) from alignment at P-fluviatile_contig18:374243..378193+

>mRNA_P-fluviatile_contig18.3143.1 ID=mRNA_P-fluviatile_contig18.3143.1|Name=mRNA_P-fluviatile_contig18.3143.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1326bp|location=Sequence derived from alignment at P-fluviatile_contig18:374243..378193+ (Porterinema fluviatile SAG_2381)
ATGTTCGGCACCCAGATGTTCCTCGCCACCGCCACCACCCTAATCGTCTC
GTCCACGGCATTCGTAGCGCCCATGGCTGTGCGACCCGTCGCGCCCGCCG
CGTCCTCGACGAGCCTGAAAATGAGCGCTGGATCGGATTACGTTGCAACC
CTGCCCGGTGCTCCTTTCCCCGATGGCAAGATGTTCGGCACCCAGATGTT
CCTCGCCACCGCCACCACCCTAATCGTCTCGTCCACGGCATTCGTAGCGC
CCATGGCTGTGCGACCCGTCGCGCCCGCCGCGTCCTCGACGAGCCTGAAA
ATGAGCGCTGGATCGGATTACGTTGCAACCCTGCCCGGTGCTCCTTTCCC
CGATGGCAAGGTTTTCGACCCGCTCGGCTTTAGCGACGGTGCTGCCCCGA
AGGAGATCAAAAAGTGGCGCGAGGCCGAGATCAAGCACGGCCGCGTTGCC
ATGCTCGCGGCACTGGGTGTCCTCGTGGCCGAGGTTTTCGACCCGCTCGG
CTTTAGCGACGGTGCTGCCCCGAAGGAGATCAAAAAGTGGCGCGAGGCCG
AGATCAAGCACGGCCGCGTTGCCATGCTCGCGGCACTGGGTGTCCTCGTG
GCCGAGAAATTCCACCCTCTCTTCATGGGCCCTAATTACATCGGCCCTGC
CGTGGACCACTTTCAGGAGATCAGCGCTCGGTTCCCAGCGAAATTCCACC
CTCTCTTCATGGGCCCTAATTACATCGGCCCTGCCGTGGACCACTTTCAG
GAGATCAGCGCTCGGTTCCCAGCGTTCTGGGGACTCTCCATCGCTATCTT
GGCCGTCATCGAGTTCAACACGATCCAGAAAGCCTTTGCCCAGCCCAGCT
TCGTAACTGGCGAGGGTGACCTCAGGGAAGAATACACCCCTGGAGACCTC
GGCTTCGACCCCCTCAACATCAAGCCCAAGACCGAGGACGCTCTCAACAC
GATGAAGACGAAAGAACTCAACAACGGCCGCCTGGCCATGATCGGCGCCG
CCGGCATGTTGGTGCAAGAGCTCGTAAAGCCGGCTCCCATCCTCGGCTAG
TTCTGGGGACTCTCCATCGCTATCTTGGCCGTCATCGAGTTCAACACGAT
CCAGAAAGCCTTTGCCCAGCCCAGCTTCGTAACTGGCGAGGGTGACCTCA
GGGAAGAATACACCCCTGGAGACCTCGGCTTCGACCCCCTCAACATCAAG
CCCAAGACCGAGGACGCTCTCAACACGATGAAGACGAAAGAACTCAACAA
CGGCCGCCTGGCCATGATCGGCGCCGCCGGCATGTTGGTGCAAGAGCTCG
TAAAGCCGGCTCCCATCCTCGGCTAG
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