prot_P-fluviatile_contig15.2406.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig15.2406.1
Unique Nameprot_P-fluviatile_contig15.2406.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length683
Homology
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BLAST of mRNA_P-fluviatile_contig15.2406.1 vs. uniprot
Match: D7G5P7_ECTSI (Similar to Mucin-1 (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5P7_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 5.150e-58
Identity = 164/363 (45.18%), Postives = 209/363 (57.58%), Query Frame = 0 
Query:  225 PTSSTMKASFEFAGVSGKTQDELQADLEAGMAEAIGGS-----AAVNVAIDDVT-PVAGAARRARVRGRRLQQGATVCSLDNGDTCNVTATATVTYDADADGPSGARSARGVDSLSKKENLQTLANSAGVEGSDLIVEGLSVSADDASPVVDASGTEGGLMGQNISSGSSEGVGNYWLFIVATILLLALWMCCFCTAFQRYRKSVEDEQQNDPYDGSMPASNPRWGEDKKSIDQKLGRSAPDTGDSERVATDDRMDDVVLRDMFMSQRNMQAHAGSRPPSGLGKALEEIPEEHSNSLGSSSSRELREGEGASGGDEASVAATAAGAANSALPHASAVPSGRQLLSRGKQRSTGSSSFADQLVG 581
            P S+TM AS E AGV G+T++ELQADLE GMAEAI  S       VNV+IDD++ P   + RR RVRGRR  Q  T C L+NGDTC V ATATV Y + A+  SG  SARGVDS+S KENLQ +A++AGVEGSDL +  L VSAD++  V+D+S T+G ++GQ I S       NYWLFI+A  LLL LW+CC C A+QRY  S   ++Q+D YD S   +  RW  DK        R +  T     VA+ DR  D  + +  +SQ+                                 S E         GD++  +A AAGA  +    AS    GRQ+LSRG+Q+STGSSSF+D+LVG
Sbjct:  725 PVSATMTASLELAGVFGRTEEELQADLEEGMAEAISDSDDSVPRTVNVSIDDLSVPNDESTRRTRVRGRRRLQE-TECVLENGDTCTVKATATVVYSSGAEDDSGGSSARGVDSISNKENLQKIASAAGVEGSDLTLGSLIVSADESDQVLDSSETDG-VVGQTIVSSDGADASNYWLFILAAALLLLLWLCCLCWAWQRYNMS--QDEQDDTYDDSTTGA--RWAGDKH-------RDSSPTFKGRGVASSDRQLDTAVVEDIISQQGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPE------GGVGDQSLSSAAAAGAGATGKVKAS----GRQILSRGQQKSTGSSSFSDELVG 1064
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BLAST of mRNA_P-fluviatile_contig15.2406.1 vs. uniprot
Match: A0A6H5KFS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFS6_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 1.700e-54
Identity = 158/364 (43.41%), Postives = 209/364 (57.42%), Query Frame = 0 
Query:  225 PTSSTMKASFEFAGVSGKTQDELQADLEAGMAEAIGGS-----AAVNVAIDDVT-PVAGAARRARVRGRRLQQGATVCSLDNGDTCNVTATATVTYDADADGPSGARSARGVDSLSKKENLQTLANSAGVEGSDLIVEGLSVSADDASPVVDASGTEGGLMGQNISSGSSEGVGNYWLFIVATILLLALWMCCFCTAFQRYRKSVEDEQQNDPYDGSMPASNPRWGEDK-KSIDQKLGRSAPDTGDSERVATDDRMDDVVLRDMFMSQRNMQAHAGSRPPSGLGKALEEIPEEHSNSLGSSSSRELREGEGASGGDEASVAATAAGAANSALPHASAVPSGRQLLSRGKQRSTGSSSFADQLVG 581
            P S+TM AS E AGV G+T++ELQADLE GMAEAI  S       VNV+IDD++ P   + RR RVRGRR  Q  T C L++GDTC V ATATV Y + AD  SG  SARGVDS+S KENLQ +A +AGVEGSDL +  L VSAD+++ V+D+S T+G ++GQNI S       NYWLFI+A  LLL  W+CC C A+QRY KS   ++Q+D +D S   +  RW  DK +      GR           +++ ++D  V++D+   Q                                         EG  G D++ ++A AAGA +         PSGR +LSRG+Q+ST +SSF+D+LVG
Sbjct:  487 PVSATMTASLELAGVFGRTEEELQADLEEGMAEAISDSDDGVPRTVNVSIDDLSVPTDESTRRTRVRGRRRLQE-TECVLEDGDTCTVKATATVVYSSGADDDSGGSSARGVDSISNKENLQKIALAAGVEGSDLTLGSLIVSADESNQVLDSSETDG-VVGQNIVSSDGADASNYWLFILAAALLLXXWLCCLCWAWQRYNKS--QDEQDDTHDDSTTGA--RWAGDKHRDSSPYKGRGV--------ASSNQQLDTAVVQDIISQQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXPEGGVG-DQSLISAAAAGAGSMGKVR----PSGRHILSRGQQKST-NSSFSDELVG 824
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2406.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5P7_ECTSI5.150e-5845.18Similar to Mucin-1 (MUC-1) (Polymorphic epithelial... [more]
A0A6H5KFS6_9PHAE1.700e-5443.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 653..673
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..393
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 394..417
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 418..682
NoneNo IPR availableTMHMMTMhelixcoord: 394..416
IPR011004Trimeric LpxA-like superfamilySUPERFAMILY51161Trimeric LpxA-like enzymescoord: 21..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig15contigP-fluviatile_contig15:759136..770127 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig15.2406.1mRNA_P-fluviatile_contig15.2406.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig15 750519..770475 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig15.2406.1 ID=prot_P-fluviatile_contig15.2406.1|Name=mRNA_P-fluviatile_contig15.2406.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=683bp
MRPPPPRHQELRSPLVLPWLPVQQWPPVLQWPLVLPWLPVQQWLLVLPWL
LVLPWLLVRPWPRCHHGSWCYHGPGTTMAPGATMAPGATMAPGTTMAPGA
TMAPGSTMAPGTTMAPGATMAPGATMAPGATMGPTLNRELTVGPTGAPSG
APTGAPTGVPTGAPTGAPTGAPTGAPTGAPTALPTAAPTGAPTAAPTGAP
TAAPTAAPTAAPTAARTFNPTSAPPTSSTMKASFEFAGVSGKTQDELQAD
LEAGMAEAIGGSAAVNVAIDDVTPVAGAARRARVRGRRLQQGATVCSLDN
GDTCNVTATATVTYDADADGPSGARSARGVDSLSKKENLQTLANSAGVEG
SDLIVEGLSVSADDASPVVDASGTEGGLMGQNISSGSSEGVGNYWLFIVA
TILLLALWMCCFCTAFQRYRKSVEDEQQNDPYDGSMPASNPRWGEDKKSI
DQKLGRSAPDTGDSERVATDDRMDDVVLRDMFMSQRNMQAHAGSRPPSGL
GKALEEIPEEHSNSLGSSSSRELREGEGASGGDEASVAATAAGAANSALP
HASAVPSGRQLLSRGKQRSTGSSSFADQLVGAPGHSATSGTAGGHALAAG
VSRESTSGATASAGFQSGGNSSSFASSGFTSASDDDDDSSSDSSNFDEDV
DKADEAEAARVAALAKNAEAESAAAPMSSAGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011004Trimer_LpxA-like_sf