prot_P-fluviatile_contig14.2209.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig14.2209.1
Unique Nameprot_P-fluviatile_contig14.2209.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length117
Homology
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BLAST of mRNA_P-fluviatile_contig14.2209.1 vs. uniprot
Match: A0A6H5L5M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M4_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 7.290e-50
Identity = 82/116 (70.69%), Postives = 98/116 (84.48%), Query Frame = 0 
Query:    1 MKAELLAHPDFQIFSCVCLLLVGIYVSVMCTCWGTLSLTRVKAEYKQRRALERDYETTLQRREDMLYHIGGAQQRGEQHQAAVLEKQLLRVDGALDMLEERLRDMDARHSGKKLKI 116
            M + LLAHPD ++     LLL+GIYVSVM TCWGT+SL++VKAE+K+R+ LER YE TLQRREDMLYHIGGAQQRGE  QAAVL+KQLLRVDG LD++EERLRD+DARH  K+ K+
Sbjct:    1 MDSHLLAHPDVRVLLYSFLLLLGIYVSVMYTCWGTVSLSKVKAEFKERQDLERAYEATLQRREDMLYHIGGAQQRGEHQQAAVLDKQLLRVDGDLDLIEERLRDLDARHRSKRPKL 116
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BLAST of mRNA_P-fluviatile_contig14.2209.1 vs. uniprot
Match: A0A835YKF7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKF7_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.730e-10
Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 0 
Query:    8 HPDFQIFSCVCLL--LVGIYVSVMCTCWGTLSLTRVKAEYKQRRALERDYETTLQRREDMLYHIGGAQQRGEQHQAAVLEKQLLRVDGALDMLEER 101
             PDF +   V  L  L  +Y+ ++  CWGTL+       +K+RRAL+  Y+   QRR+D+LYH+  A+QRGE+ +   L+ QL  +   LD LE +
Sbjct:   13 QPDFHLRIVVAGLGVLAVVYLLLLWQCWGTLNPRAAARRHKERRALQASYDEAFQRRDDLLYHLDWARQRGEKAEVKNLQGQLEGMLEELDDLESQ 108
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5M4_9PHAE7.290e-5070.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YKF7_9STRA1.730e-1038.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 81..101
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..39
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:1801707..1803237 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2209.1mRNA_P-fluviatile_contig14.2209.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig14 1801692..1804039 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig14.2209.1 ID=prot_P-fluviatile_contig14.2209.1|Name=mRNA_P-fluviatile_contig14.2209.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=117bp
MKAELLAHPDFQIFSCVCLLLVGIYVSVMCTCWGTLSLTRVKAEYKQRRA
LERDYETTLQRREDMLYHIGGAQQRGEQHQAAVLEKQLLRVDGALDMLEE
RLRDMDARHSGKKLKI*
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