prot_P-fluviatile_contig14.2136.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig14.2136.1
Unique Nameprot_P-fluviatile_contig14.2136.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length246
Homology
BLAST of mRNA_P-fluviatile_contig14.2136.1 vs. uniprot
Match: A0A6H5JDH5_9PHAE (RPA43_OB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDH5_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 3.760e-100
Identity = 154/181 (85.08%), Postives = 163/181 (90.06%), Query Frame = 0
Query:    1 MTTSPFEEADLKMCVSLLPRDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAREGLIVDEMPHIHFDVKAKAQVFRPRPGHVLQGRVNKVTSTHVGMLVCGIFNASVASELMGEGYRFDMMARQWKRGPRNNGGTEGG-EVISVGDDIQFVVTRMHEAAGLISIEGSLEGLPQ 180
            M  SPFEE +LKMCVSLLP DIGDIYAGIRRNIYQFLMRYNE+LGGVLLAVS LSFGDGAREG I DEMPHIHFDVKAKAQVFRPRPGHVLQGRVNKVTSTHVGMLVCGIFNASVASE MGEG+RFDM AR+W+R   + GG +G  EVI+VG D QFVVTRMHEAAGLISIEGSLEGLP+
Sbjct:    1 MAASPFEEVELKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNEALGGVLLAVSNLSFGDGAREGRIEDEMPHIHFDVKAKAQVFRPRPGHVLQGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDMTAREWQR---SRGGKDGAREVIAVGADTQFVVTRMHEAAGLISIEGSLEGLPK 178          
BLAST of mRNA_P-fluviatile_contig14.2136.1 vs. uniprot
Match: A0A835Z8S8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S8_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.120e-43
Identity = 86/192 (44.79%), Postives = 117/192 (60.94%), Query Frame = 0
Query:    4 SPFEEADLKMCVSLLPRDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAREGLIVDEMPHIHFDVKAKAQVFRPRPGHVLQGRVNK-------------VTSTHVGMLVCGIFNASV-ASELMGEGYRFDMMARQWKRGPRNNGGTE------GGEVISVGDDIQFVVTRMHEAAGLISIEGSL 175
            SPFEE  L +C+SLLP  + DI+  IR+N+Y+ LM YN  +GGV++A+ ++   DG   G I++EMPH+HF+++A AQVFRPR G +L GRV K             V+ THV MLVCGIFNAS+ A EL G GY +     +W+R               G + + +G  + F V R+H+A GLISIEG L
Sbjct:   43 SPFEEVSLALCISLLPHALSDIFGSIRKNVYKLLMHYNRDVGGVIVALGDIRMADGEHHGRIMEEMPHLHFNIEANAQVFRPRSGALLNGRVMKPPLHAAFSCVYAQVSGTHVSMLVCGIFNASIYAGELEGVGYAYSDARARWERXXXXXXXXXXXXXXXGPDAVEMGTSLDFTVRRLHQAQGLISIEGGL 234          
BLAST of mRNA_P-fluviatile_contig14.2136.1 vs. uniprot
Match: A0A4D9D057_9STRA (RPA43_OB domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D057_9STRA)

HSP 1 Score: 135 bits (339), Expect = 7.580e-35
Identity = 70/171 (40.94%), Postives = 106/171 (61.99%), Query Frame = 0
Query:    5 PFEEADLKMCVSLLPRDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAREGLIVDEMPHIHFDVKAKAQVFRPRPGHVLQGRVNKVTSTHVGMLVCGIFNASVASELMGEGYRFDMMARQWKRGPRNNGGTEGGEVISVGDDIQFVVTRMHEAAGLISIEGSL 175
            PF+E  +   ++LLP  +G++   I   ++  LM+YN+ +GG+LL +S++ F    R   ++ ++PH+H  V+A + VF P PG  L G V KVTSTHV +LV  +FNA++A E M E Y FD     W        GT G EV+ +G+++ F V  +HEAAGLI+++GSL
Sbjct:   31 PFQEQRVLFKLALLPDAMGNLEESIHEKLHDMLMKYNQDVGGILLTLSQVRFPPSRRFASVMGDLPHLHVRVEATSLVFTPEPGMSLTGVVIKVTSTHVALLVYDLFNAAIAREDMPEAYAFDNDREAWV-------GTGGKEVLGLGEEVAFRVALVHEAAGLIALDGSL 194          
BLAST of mRNA_P-fluviatile_contig14.2136.1 vs. uniprot
Match: A0A6G0XIV8_9STRA (RPA43_OB domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIV8_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.010e-28
Identity = 71/180 (39.44%), Postives = 101/180 (56.11%), Query Frame = 0
Query:    4 SPFEEADLKMCVSLLPRDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAREGLIVDEMPHIHFDVKAKAQVFRPRPGHVLQGRVNKVTSTHVGMLVCGIFNASVASELMGEGYRFDMMARQWKRGPRNNGGTEGGEVISVGDDIQFVVTRMHEAAGLISIEGSLEGLPQQKE 183
            SPF +A L M VSL P  I +   G+   + Q LM+Y E + GVLL+ + L   +    G I++E P IH  V A A VFRP PG  L   VNK+ S H+G+L+ G+FN S+A+  M  G+  +     W          E G  IS+ D+++F V ++HEA G+ISI+G+L  + Q  E
Sbjct:    3 SPFAKAKLVMSVSLAPYHIQNAKKGLEDQLSQMLMKYCEPVQGVLLSFNSLQMINPY--GHIINETPFIHVRVAADALVFRPTPGMKLSATVNKIGSNHIGLLLAGVFNVSIAATEMPSGFVHNHFEEAWVG--------EDGASISLQDEVRFKVLQVHEAHGVISIDGTLRSVKQTAE 172          
BLAST of mRNA_P-fluviatile_contig14.2136.1 vs. uniprot
Match: A0A1V9ZJD1_9STRA (RPA43_OB domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJD1_9STRA)

HSP 1 Score: 114 bits (284), Expect = 5.120e-27
Identity = 67/180 (37.22%), Postives = 98/180 (54.44%), Query Frame = 0
Query:    4 SPFEEADLKMCVSLLPRDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAREGLIVDEMPHIHFDVKAKAQVFRPRPGHVLQGRVNKVTSTHVGMLVCGIFNASVASELMGEGYRFDMMARQWKRGPRNNGGTEGGEVISVGDDIQFVVTRMHEAAGLISIEGSLEGLPQQKE 183
            SPF  A L M  SL P  I D   G+   +   LM+Y E + GV+LA   +   +    G I++E P+IH  V  +A VFRP+ G  L   VNKV S+H+G+L+ G+FN S+A+  M +GY        W          E G  I++  ++ F V R+H A G+ISIEGS+ G  ++++
Sbjct:    2 SPFVNAKLVMSCSLAPCHIHDAKKGLEEQLNLMLMKYCEPVEGVVLAFDGIKLLNPY--GHIINETPYIHVKVATEALVFRPKAGMTLSANVNKVGSSHIGLLLAGVFNVSIAAADMPKGYAHSYSDDAWIN--------EDGATIALESEVSFTVVRVHVAHGVISIEGSMRGSKKKRK 171          
BLAST of mRNA_P-fluviatile_contig14.2136.1 vs. uniprot
Match: A0A2D4BXV9_PYTIN (S1 motif domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXV9_PYTIN)

HSP 1 Score: 114 bits (284), Expect = 6.530e-27
Identity = 69/165 (41.82%), Postives = 97/165 (58.79%), Query Frame = 0
Query:   11 LKMCVSLLPRDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAREGLIVDEMPHIHFDVKAKAQVFRPRPGHVLQGRVNKVTSTHVGMLVCGIFNASVASELMGEGYRFDMMARQWKRGPRNNGGTEGGEVISVGDDIQFVVTRMHEAAGLISIEGSL 175
            ++  VSLLP  IGD   GI + +   LMRY++ L GV+L+ S +     +  G I++E P+IH  V A A VF+PR G  L G VNK+ S HVG+L+ G+FN SVA+  + +GY  +     WK       G +G   ISVG+ I   V R+H A G+I+IE S+
Sbjct:   11 IRQPVSLLPCHIGDARLGIDQEMTALLMRYSDKLEGVILSFSNVRLEKPS--GHILNEQPYIHCKVIADALVFQPRVGMTLSGVVNKIGSNHVGLLIAGVFNGSVAASELPKGYVHNYAEDAWK-------GADG-TTISVGETITVKVARVHVAGGMIAIEASM 165          
BLAST of mRNA_P-fluviatile_contig14.2136.1 vs. uniprot
Match: A0A484EH94_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EH94_BRELC)

HSP 1 Score: 113 bits (283), Expect = 9.160e-27
Identity = 67/161 (41.61%), Postives = 96/161 (59.63%), Query Frame = 0
Query:   15 VSLLPRDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAREGLIVDEMPHIHFDVKAKAQVFRPRPGHVLQGRVNKVTSTHVGMLVCGIFNASVASELMGEGYRFDMMARQWKRGPRNNGGTEGGEVISVGDDIQFVVTRMHEAAGLISIEGSL 175
            VSL P    D  AGI +N+   LM+Y+E L GV+L+ SE+        G+IV+EMP+IH  V A A VFRP+ G +L+G VNK+ S H+GML+ G+FN SVA   +  GY  +     W          + G  I+V +D+Q  V R+H A+G+I+IE ++
Sbjct:   12 VSLSPCHAEDARAGIEQNLNDQLMQYSEPLKGVVLSFSEVQLDKPY--GVIVNEMPYIHCKVLADALVFRPKKGMILRGVVNKIGSNHIGMLIAGVFNGSVAGAELPVGYVHNYSQDCWL--------AKDGSSIAVENDVQVKVLRVHVASGMIAIEATM 162          
BLAST of mRNA_P-fluviatile_contig14.2136.1 vs. uniprot
Match: W2N1L6_PHYPR (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2N1L6_PHYPR)

HSP 1 Score: 113 bits (283), Expect = 9.980e-27
Identity = 69/175 (39.43%), Postives = 100/175 (57.14%), Query Frame = 0
Query:    1 MTTSPFEEADLKMCVSLLPRDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAREGLIVDEMPHIHFDVKAKAQVFRPRPGHVLQGRVNKVTSTHVGMLVCGIFNASVASELMGEGYRFDMMARQWKRGPRNNGGTEGGEVISVGDDIQFVVTRMHEAAGLISIEGSL 175
            M ++ F    ++  VSL P    D   GI +++ + LMRY+E+L GV+L+ S +  G     G IV+EMP+IH  V   A VFRP+ G +L+G VNK+ S HVGML  G+FN SVA   + +GY  +     W          E G  ISV D+++  V R+H A G+I+IE ++
Sbjct:    1 MASNAFVLCKVRHSVSLSPCHAVDARVGIEQDLTEQLMRYSEALQGVVLSFSNVQLG--RPYGTIVNEMPYIHCKVLTDALVFRPKEGMMLRGVVNKIGSNHVGMLFAGVFNGSVAEAELPKGYVHNYAQDCWLG--------EDGSSISVEDEVEVKVLRVHVAGGMIAIEATM 165          
BLAST of mRNA_P-fluviatile_contig14.2136.1 vs. uniprot
Match: A0A5A8C9B1_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C9B1_CAFRO)

HSP 1 Score: 113 bits (282), Expect = 3.010e-26
Identity = 65/172 (37.79%), Postives = 94/172 (54.65%), Query Frame = 0
Query:    4 SPFEEADLKMCVSLLPRDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAREGLIVDEMPHIHFDVKAKAQVFRPRPGHVLQGRVNKVTSTHVGMLVCGIFNASVASELMGEGYRFDMMARQWKRGPRNNGGTEGGEVISVGDDIQFVVTRMHEAAGLISIEGSL 175
            SPF EAD+ M +S+ P D+      + R + Q + +Y +  GGV+LA   +   D +  G IVDEMP+IH  V A+A +FRP+PG  +   V  V++ H+G LVCG FNA+VA + +GE Y FD     W   P+   G      +  GD +   V       GL+++E SL
Sbjct:    7 SPFVEADISMRMSIPPGDVDSASGFVHRALEQCVHKYRQEFGGVMLAYDNVRMEDDS--GAIVDEMPNIHAVVLARAVLFRPQPGQEMTAVVTSVSAAHIGALVCGTFNATVAEDQLGE-YAFDAEEASWN--PKAGDGAP----VRAGDAVTLRVVACKAGRGLVTVEASL 169          
BLAST of mRNA_P-fluviatile_contig14.2136.1 vs. uniprot
Match: T0RQ13_SAPDV (RPA43_OB domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RQ13_SAPDV)

HSP 1 Score: 109 bits (273), Expect = 2.100e-25
Identity = 65/172 (37.79%), Postives = 95/172 (55.23%), Query Frame = 0
Query:    4 SPFEEADLKMCVSLLPRDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAREGLIVDEMPHIHFDVKAKAQVFRPRPGHVLQGRVNKVTSTHVGMLVCGIFNASVASELMGEGYRFDMMARQWKRGPRNNGGTEGGEVISVGDDIQFVVTRMHEAAGLISIEGSL 175
            SPF  A L M  SL P  I D   G+   +   LM+Y + + GV+LA + ++  +    G I++E P+IH  V A A VFRP PG  L   VNKV S H+G+L+ G+FN S+ +  M +GY  +     W          + G  I +G ++ F V R+H+A G+ISI+GS+
Sbjct:   14 SPFVNAKLVMSCSLAPCHIHDAKKGLEEQLNLMLMKYCDPVEGVILAFNAITLLNPY--GHIINETPYIHVRVAADALVFRPTPGMELSAVVNKVGSNHIGLLLAGVFNVSIDAAEMPDGYTHNFHEEAWVG--------DDGVTIELGAEVAFNVLRVHQAYGVISIDGSM 175          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDH5_9PHAE3.760e-10085.08RPA43_OB domain-containing protein n=2 Tax=Ectocar... [more]
A0A835Z8S8_9STRA1.120e-4344.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D057_9STRA7.580e-3540.94RPA43_OB domain-containing protein n=2 Tax=Monodop... [more]
A0A6G0XIV8_9STRA1.010e-2839.44RPA43_OB domain-containing protein n=1 Tax=Aphanom... [more]
A0A1V9ZJD1_9STRA5.120e-2737.22RPA43_OB domain-containing protein n=1 Tax=Achlya ... [more]
A0A2D4BXV9_PYTIN6.530e-2741.82S1 motif domain-containing protein n=1 Tax=Pythium... [more]
A0A484EH94_BRELC9.160e-2741.61Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
W2N1L6_PHYPR9.980e-2739.43Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A5A8C9B1_CAFRO3.010e-2637.79Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
T0RQ13_SAPDV2.100e-2537.79RPA43_OB domain-containing protein n=2 Tax=Saprole... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 184..204
NoneNo IPR availableCOILSCoilCoilcoord: 210..230
NoneNo IPR availableGENE3D2.40.50.1060coord: 89..243
e-value: 1.4E-22
score: 82.7
NoneNo IPR availablePANTHERPTHR12709:SF5DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA43coord: 6..228
NoneNo IPR availablePANTHERPTHR12709DNA-DIRECTED RNA POLYMERASE II, IIIcoord: 6..228
IPR036898RNA polymerase Rpb7-like, N-terminal domain superfamilyGENE3D3.30.1490.120coord: 1..88
e-value: 2.7E-6
score: 29.3
IPR041178RPA43, OB domainPFAMPF17875RPA43_OBcoord: 85..132
e-value: 2.4E-7
score: 31.4
IPR005576RNA polymerase Rpb7-like , N-terminalPFAMPF03876SHS2_Rpb7-Ncoord: 14..83
e-value: 1.9E-6
score: 28.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:1249661..1252380 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2136.1mRNA_P-fluviatile_contig14.2136.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig14 1249053..1252428 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig14.2136.1 ID=prot_P-fluviatile_contig14.2136.1|Name=mRNA_P-fluviatile_contig14.2136.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=246bp
MTTSPFEEADLKMCVSLLPRDIGDIYAGIRRNIYQFLMRYNESLGGVLLA
VSELSFGDGAREGLIVDEMPHIHFDVKAKAQVFRPRPGHVLQGRVNKVTS
THVGMLVCGIFNASVASELMGEGYRFDMMARQWKRGPRNNGGTEGGEVIS
VGDDIQFVVTRMHEAAGLISIEGSLEGLPQQKEKEKEEESARRTKSRKRQ
AESEAVSPQAEDEETAAAAAKAARKKAKKAARLAAKAAKVVKMEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036898RNA_pol_Rpb7-like_N_sf
IPR041178RPA43_OB
IPR005576Rpb7-like_N