prot_P-fluviatile_contig13.1903.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig13.1903.1
Unique Nameprot_P-fluviatile_contig13.1903.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length283
Homology
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BLAST of mRNA_P-fluviatile_contig13.1903.1 vs. uniprot
Match: A0A6H5L3W9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L3W9_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 9.200e-30
Identity = 87/188 (46.28%), Postives = 104/188 (55.32%), Query Frame = 0 
Query:    1 MVDAMTTVLYVVVLAGWCLLVCVVLRCCNETDSHSIFFDLE-EIAISAGGPKPMT--VVDGQPVRFARVQPLIDSPTTLAGVAAASADATSAIAASQSGNGNDIGGGSAVGGGGHR---LDRLEMAPVAPAPASA---LPAAEEVWSPILALRTFVEPLASRASAAFRDINFHVSFHPPDESASGATT 179
            M D MTT LY++VL  W  L+CV+LRCC++ +  ++FFDL+ EI ++  GPKP    VVDG+P RFARVQ L  + T   G                             GG  H    LD LE+  V    A+A   LPAA+EVWSPILALRTFVEPL SRASAAFR  NFHVSF    E      T
Sbjct:    1 MADTMTTALYIIVLTAWFCLMCVILRCCSDGEPPTLFFDLDPEIDLTGAGPKPSVTAVVDGEPARFARVQILGTAATAEEG----------------------------KGGTRHEDLTLDGLEVPAVMGRTAAAGDDLPAAQEVWSPILALRTFVEPLTSRASAAFR--NFHVSFFDGQEEVGKVVT 158
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L3W9_9PHAE9.200e-3046.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..282
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:2754575..2757913 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1903.1mRNA_P-fluviatile_contig13.1903.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig13 2754296..2759193 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig13.1903.1 ID=prot_P-fluviatile_contig13.1903.1|Name=mRNA_P-fluviatile_contig13.1903.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=283bp
MVDAMTTVLYVVVLAGWCLLVCVVLRCCNETDSHSIFFDLEEIAISAGGP
KPMTVVDGQPVRFARVQPLIDSPTTLAGVAAASADATSAIAASQSGNGND
IGGGSAVGGGGHRLDRLEMAPVAPAPASALPAAEEVWSPILALRTFVEPL
ASRASAAFRDINFHVSFHPPDESASGATTTTATAVVPAMPAGAAGAAGAV
PEAQSGGGEGGGSRDGGGWANDRFMASTFVASSESYRSTSSGGIEVSVVQ
LKHRVNGEGGGEEAGAPGPEEEMKSVDVTEVV*
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