prot_P-fluviatile_contig13.1895.1 (polypeptide) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1895.1 vs. uniprot
Match: D7FV36_ECTSI (Mediator of RNA polymerase II transcription subunit 21 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV36_ECTSI) HSP 1 Score: 148 bits (373), Expect = 2.640e-43 Identity = 82/105 (78.10%), Postives = 90/105 (85.71%), Query Frame = 0
Query: 1 MEEEKDAISVMQDSVDQLALSMFDSLRLIPFSEEVEGGARGAIPHR----GNPTAAPLRRAVVTNAAWASQVQSLAEGVLKQAKALEHLIDVLPGAELREDQQME 101
ME +KDA+S MQ+SVDQLALSMFDSLRLIPFSEEV+GGARG P + G P AAPLRRAV TNAAWA VQSLA+GVLKQA+AL+ LIDVLPGAELREDQQME
Sbjct: 21 MEVDKDAVSAMQESVDQLALSMFDSLRLIPFSEEVKGGARGVAPLQQQQPGQPDAAPLRRAVTTNAAWADTVQSLADGVLKQARALDGLIDVLPGAELREDQQME 125
BLAST of mRNA_P-fluviatile_contig13.1895.1 vs. uniprot
Match: A0A835Z332_9STRA (Mediator of RNA polymerase II transcription subunit 21 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z332_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 1.340e-6 Identity = 38/111 (34.23%), Postives = 59/111 (53.15%), Query Frame = 0
Query: 3 EEKDAISVMQDSVDQLALSMFDSLRLIP-------FSEE--VEGGARGAIPHRGNPTAAPLRRAVVTNAAWASQVQSLAEGVLKQAKALEHLIDVLPGAELREDQQMEARK 104
+++D +SVMQD VDQLAL+MF+S+R +P F+ E V G A G W V +L+ V+ +A+AL+++I+ LPG + E QQ++ K
Sbjct: 20 QDQDQVSVMQDKVDQLALAMFESIRSLPDPAADPSFAPEFVVSAGQSDAQQQHGQQ--------------WIDAVAALSARVVAEARALDNMIETLPGMDKTEAQQLQELK 116
BLAST of mRNA_P-fluviatile_contig13.1895.1 vs. uniprot
Match: K3X2M6_GLOUD (Mediator of RNA polymerase II transcription subunit 21 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2M6_GLOUD) HSP 1 Score: 52.8 bits (125), Expect = 3.090e-6 Identity = 38/96 (39.58%), Postives = 52/96 (54.17%), Query Frame = 0
Query: 6 DAISVMQDSVDQLALSMFDSLRLIPFSEEVEGGARGAIPHRGNPTAAPLRRAVVTNAAWASQVQSLAEGVLKQAKALEHLIDVLPGAELREDQQME 101
D +S++Q+SVD++ALSMF++LRL+P S EG TAA +R SLA VL+ K + LID LPG E E +Q+E
Sbjct: 33 DKVSMLQESVDKMALSMFNALRLLPASTGDEGSKEE--------TAAAIR--------------SLANDVLRMVKETDALIDDLPGLEKTESEQLE 106
BLAST of mRNA_P-fluviatile_contig13.1895.1 vs. uniprot
Match: A0A5D6YEG9_9STRA (Mediator of RNA polymerase II transcription subunit 21 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YEG9_9STRA) HSP 1 Score: 48.9 bits (115), Expect = 7.610e-5 Identity = 35/96 (36.46%), Postives = 52/96 (54.17%), Query Frame = 0
Query: 6 DAISVMQDSVDQLALSMFDSLRLIPFSEEVEGGARGAIPHRGNPTAAPLRRAVVTNAAWASQVQSLAEGVLKQAKALEHLIDVLPGAELREDQQME 101
D +S++Q+SVD++ALSMF++LRL+P V G R A A+ ++SLA+ VL+ K + LID LPG + E Q+E
Sbjct: 26 DKVSLLQESVDKMALSMFNALRLLP----VGSGDR---------------------AETATAIRSLADDVLRMVKETDALIDDLPGLDKTESDQLE 96 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1895.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-fluviatile_contig13.1895.1 ID=prot_P-fluviatile_contig13.1895.1|Name=mRNA_P-fluviatile_contig13.1895.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=112bpback to top |