prot_P-fluviatile_contig13.1872.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig13.1872.1
Unique Nameprot_P-fluviatile_contig13.1872.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length365
Homology
BLAST of mRNA_P-fluviatile_contig13.1872.1 vs. uniprot
Match: A0A6H5JJD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJD0_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 1.850e-61
Identity = 193/401 (48.13%), Postives = 209/401 (52.12%), Query Frame = 0
Query:   17 EAEPGGAGSRLASLYVCLIPPLLVGVTDHPTAGVNLAIVFAMCGGLLAFSWGRLVARDMRQQARVEAAAAVXXXSRRQWQEHWRAGPAESTAAAVSGLEDGMEWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNSAVGTAGRARALHDSNRDGVRHASALSSSPRWS------------------------------------LSRDNVLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG--------NELA--------KRRLGLIYALLHSVRQVTVRWDLLDWRQLGFGIAGFAVGLTCFAIQGSSATAGWYHLWHGAWHVLAMGSAVPILRARKWGPAELVTEEDGGLWGCG 365
            EA+  GAGSRLASLYVCLIPPLLVGVTDHPTAG NLA+VFAMC GLLA +WGRLV RD+R++A  E     XXX       HWR   AES  +A           XXXXXXXXXXXXXXXXXXXXXX                GR  AL  S R  V H  A   S  WS                                    + RD                  XXXXXXXXX                                       XXXXX  SG        NEL           RLG I+ LL S+R+V VRW LLDWRQLG G+AGFA GLTCFA+QG+SATAGWYHLWHGAWHVLAMGSAVPILRAR+WGPAE   +EDGGLWGCG
Sbjct: 1382 EADGSGAGSRLASLYVCLIPPLLVGVTDHPTAGANLAVVFAMCSGLLASNWGRLVRRDLRERALAEEXXXXXXXXXXXG--HWR---AESAGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------GRENALSGSKRGVVNHGVAAPPSSGWSFREEEEQGDSDQNEGKEHXXXXXXXXGEGQAGDQGLVERDKAKSSSHTAGTRVLRGGGXXXXXXXXXHDNTDTSTIINDFIPSNPSSLSVLSRPRARSLGGSRRGGXXXXXGSSGWTGADVSSNELXXXXXXXXXSTRLGRIFPLLRSLRRVAVRWGLLDWRQLGLGVAGFAAGLTCFAVQGTSATAGWYHLWHGAWHVLAMGSAVPILRARRWGPAESDPDEDGGLWGCG 1761          
BLAST of mRNA_P-fluviatile_contig13.1872.1 vs. uniprot
Match: D8LS70_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS70_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 2.920e-61
Identity = 201/395 (50.89%), Postives = 216/395 (54.68%), Query Frame = 0
Query:   17 EAEPGGAGSRLASLYVCLIPPLLVGVTDHPTAGVNLAIVFAMCGGLLAFSWGRLVARDMRQQARVEAAAAVXXXSRRQWQEHWRAGPAESTAAAVSGLEDGMEWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNSAVGTAGRARALHDSNRDGVRHASALSSSPRWS-----------------------------------LSRDN-----------VLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGNELAKRRLGLIYALLHSVRQVTVRWDLLDWRQLGFGIAGFAVGLTCFAIQGSSATAGWYHLWHGAWHVLAMGSAVPILRARKWGPAELVTEEDGGLWGCG 365
            EA+ GGAGSRLASLYVCLIPPLLVGVTDHPTAG NLA+VFAMCGGLLA +WGRLV RD+R++A  E     XXX   Q   HWRA  AES A             XXXXXXXXXXXXXXXXXXXXXX                    AL  S R  V H    S S  WS                                   + RD            VLR   XXXXXX                                          XXXXXXXXXXXXXXXXXX        RLG I+ LL S+R+V  R  LLDWRQLG G+AGFA GLTCFA+QG+SATAGWYHLWHGAWHVLAMGSAVPILRAR+WGPAE   +EDGGLWGCG
Sbjct:  805 EADGGGAGSRLASLYVCLIPPLLVGVTDHPTAGANLAVVFAMCGGLLASNWGRLVRRDLRERALAEEXXXXXXXXXXQG--HWRAESAESAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------NALSRSKRGVVNHGVVASPSSGWSFREEEEEGEGEQNEEKELGKEXXXXXXXXAEDEGLVGRDRAKSSSHTAGTRVLRGGGXXXXXXHDDTDASTINNDFIPCNPSSLSVLSRPRARSLGGSRCGGGVRXXXXXXXXXXXXXXXXXXXXXXXXSTRLGRIFRLLRSLRRVAFRRGLLDWRQLGLGVAGFAAGLTCFAVQGTSATAGWYHLWHGAWHVLAMGSAVPILRARRWGPAESDPDEDGGLWGCG 1178          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1872.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJD0_9PHAE1.850e-6148.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS70_ECTSI2.920e-6150.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 298..317
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 344..365
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 71..297
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..70
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 318..322
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 323..343
NoneNo IPR availableTMHMMTMhelixcoord: 298..320
NoneNo IPR availableTMHMMTMhelixcoord: 49..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:2400596..2401900 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1872.1mRNA_P-fluviatile_contig13.1872.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig13 2400596..2401902 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig13.1872.1 ID=prot_P-fluviatile_contig13.1872.1|Name=mRNA_P-fluviatile_contig13.1872.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=365bp
SDGGGSVTGNAGAGRAEAEPGGAGSRLASLYVCLIPPLLVGVTDHPTAGV
NLAIVFAMCGGLLAFSWGRLVARDMRQQARVEAAAAVAAASRRQWQEHWR
AGPAESTAAAVSGLEDGMEWDEEEGGDGGGGGAGGGGGGAASGAASAAGA
APNSAVGTAGRARALHDSNRDGVRHASALSSSPRWSLSRDNVLREEEEER
GEREEGGGVERPRARSCGGGRARRADSSGLQEAGGGRGGGWSADSGSEMV
LMADDEATPGGSSSGNELAKRRLGLIYALLHSVRQVTVRWDLLDWRQLGF
GIAGFAVGLTCFAIQGSSATAGWYHLWHGAWHVLAMGSAVPILRARKWGP
AELVTEEDGGLWGCG
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