prot_P-fluviatile_contig13.1858.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig13.1858.1
Unique Nameprot_P-fluviatile_contig13.1858.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length285
Homology
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BLAST of mRNA_P-fluviatile_contig13.1858.1 vs. uniprot
Match: A0A6H5JS55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS55_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 4.170e-55
Identity = 125/247 (50.61%), Postives = 140/247 (56.68%), Query Frame = 0 
Query:   53 ALQCFSCADCSVGGALSAHIEQCPPEENCCAVVSRPRTSRWGYQSSSVDRGCASSLHLECEPLDATPEMASAAD-HSKGNRQL-------HGDSRDADSQQSAPGDENI----GGPGGSKSAGGPLQRSLCCSTDLCNGLEDPRTEGHRRSEEYLRFLMEGNPRK---SGNHPPGTSFGXXXXXXXXXXXXDLGVGTVAMTXXXXXXXXXXXXXXRGGVVGGSRFATVLVIVGTFSQVLWLLSSLIE 284
            ALQ FSC DCSVGGALSA  +QCPP E  CA VSRPRTS   YQSSSVDRGCASSLH+ CE L+      +  D   K  +         HG  R++D Q   PG+ +        GGS++ G  LQ  +CCSTD+CNGLED R EG RRS E+LR LMEG PRK   S    P                   GVGT A                RGG VGGSRFATVLVIVGTFSQVLWL+  LIE
Sbjct:   76 ALQYFSCTDCSVGGALSAQKQQCPPGETFCAAVSRPRTSPLVYQSSSVDRGCASSLHVACEQLNPPQSSLARKDIEEKAGKSATTPAVGDHGH-RESDGQNFLPGNSSSRSSRSSDGGSQNDGHHLQPLMCCSTDICNGLEDARREGQRRSGEHLRTLMEGAPRKEVRSSRDSPADG------GIVAAGGRGSGVGTAAAVEKRMVDGEDDNSA-RGGGVGGSRFATVLVIVGTFSQVLWLVGRLIE 314
[Close]
BLAST of mRNA_P-fluviatile_contig13.1858.1 vs. uniprot
Match: D8LTZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTZ0_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 4.340e-53
Identity = 123/243 (50.62%), Postives = 135/243 (55.56%), Query Frame = 0 
Query:   53 ALQCFSCADCSVGGALSAHIEQCPPEENCCAVVSRPRTSRWGYQSSSVDRGCASSLHLECEPLD------ATPEMASAADHSKGNRQL--HGDSRDADSQQSAPGDENIGGPGGSKSAGGP---LQRSLCCSTDLCNGLEDPRTEGHRRSEEYLRFLMEGNPRKSGNHPPGTSFGXXXXXXXXXXXXDLGVGTVAMTXXXXXXXXXXXXXXRGGVVGGSRFATVLVIVGTFSQVLWLLSSLIE 284
            ALQCFSC DCSVGGALSA  +QCPP E  CA VSRPRTS   YQSSSVDRGCASSL++ CE L+      A  E+A  A  +     +  HG  R++D Q   PG                   LQ  LCCSTD CNGLED R EG RRSEE+LR LMEG PRK      G+                 GVGT A                RGG  GGSRFATVLVIVGTFSQVLWL+  LIE
Sbjct:   34 ALQCFSCTDCSVGGALSAQKQQCPPGEAFCAAVSRPRTSPLVYQSSSVDRGCASSLNVACEQLNPPQSSLARKEIAEEAGGTATTPAVGDHGH-RESDGQNLRPGSXXXXXXXXXXXXXXXXHHLQPLLCCSTDFCNGLEDARREGQRRSEEHLRSLMEGTPRKKVGFSRGS---LADGGIVTAGGRGSGVGTAAAVGERMVDGEDDNSA-RGGCEGGSRFATVLVIVGTFSQVLWLVGRLIE 271
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1858.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JS55_9PHAE4.170e-5550.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTZ0_ECTSI4.340e-5350.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..261
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 262..283
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 284..284
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..54
NoneNo IPR availableTMHMMTMhelixcoord: 32..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:2240359..2242635 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1858.1mRNA_P-fluviatile_contig13.1858.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig13 2240184..2242635 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig13.1858.1 ID=prot_P-fluviatile_contig13.1858.1|Name=mRNA_P-fluviatile_contig13.1858.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=285bp
MTGGVRRSACDKCPEQRTAPRRRRGRRYVANASRAFVFTVFSIVTEMAVL
ASALQCFSCADCSVGGALSAHIEQCPPEENCCAVVSRPRTSRWGYQSSSV
DRGCASSLHLECEPLDATPEMASAADHSKGNRQLHGDSRDADSQQSAPGD
ENIGGPGGSKSAGGPLQRSLCCSTDLCNGLEDPRTEGHRRSEEYLRFLME
GNPRKSGNHPPGTSFGGGGGGAAASGGGDLGVGTVAMTAAAGGEDDSSAQ
STRGGVVGGSRFATVLVIVGTFSQVLWLLSSLIE*
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