prot_P-fluviatile_contig13.1752.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig13.1752.1
Unique Nameprot_P-fluviatile_contig13.1752.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1376
Homology
BLAST of mRNA_P-fluviatile_contig13.1752.1 vs. uniprot
Match: D7G868_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G868_ECTSI)

HSP 1 Score: 697 bits (1799), Expect = 9.470e-231
Identity = 437/824 (53.03%), Postives = 529/824 (64.20%), Query Frame = 0
Query:  491 LQKQARVWLARRAVDLKRVEVGLTSRVSELAERLASSDDSRSVSAVFGQIDKDYRKYEKIIAEMKAREEKMAITFVEKVLESRDADIEGAWARFVGAATEYGKSLKQQSEARRTHPHLVSHDYGIRSTELHDEKLLLLMERYAVPARARTLPSAFLRVALPMHLRLRGGSL----RPPAQN-----GNQRNKRKRICDITPSPTGGQSPAELETGGAFASRVETTVT--KSAXXXXXXXXPTYRTGVAPAGYPNKSSSNGGRRS--KDCESRSEKMQTTTGNDNSFDFGC----GVGGGRDDSRGGCNRAVADTSD----GGDAWSSVASGSGYPARYFPDSKRVGDGGGPATGWENAWDTERASRGLTGDAGSRFPGSTVRRDLPSGLRESVERLCAAAFLRGHVPRGLMPEGTTPGEAYQRYLELPPSLAKIRHEQLCTEASKPVASALRGRGYITVEQLLPLSKLECLVGQAGAGSGETLAAVSLARELRPKQDASGAGXXXXXXXXXXXGGHGVFSPLPSFSRRGLFAGSRRASSSTEGSGRS----GLGGAGFGEGRRKVESRGASRSMINISCGYPGGDRSCVTKKKKKAL-RISLSGLEFEGDARGAEK-RSQWEPSKYTSRPEEWVRPPPSVIKQRWDDSTKSFVPIKNYSFDGLYRRHHPLDLPDGNDEEGGSHHRQMGYDRNPADVDHEGNVRLAEGERHSTVGRRDCSSRVDGTPPASLTRTKILPGPAGGGDLAARRMKNVLREEYGTFFDGMTQSARDLHQHMIKDSTSWGSVDDPIGTLLRRAAFFIVEHPSPATRAELAAARAKDLAAK 1287
            + KQARVWLARRAV L++V+VGLTSRVS+L + LASSDDSRS+S VFGQID+DYRKY++IIAEM+ARE++MA+TFVEKVLE R ADI GAW RFVGAATEY    +++S+ARR HP+  S D    ++E+HDEKL+ LMERY +PA A+ LPSA+LR ALPMHL+LR   L    +   QN     G QR KR+R+  + PS +  +  A  + GG F   V+      K +         T  T       P++ SS  G+RS    CE R+       G D +   GC    G G   D+  G   R    T       GD   +V   S    R+       G GG   +GWE+ WD ER  RGLTGDAGSRFPGS VR+D+PSGL E+VERLCAAAFLRGHVP GLMP+GTTP EAY+RYLELPPSLAKIRHEQLCTEAS+PVASALR RGY  +EQLLPLSKLE L  QAG+G+ ETLAAVS+A E++PK+   G G            G  +FSPL  FSRR L A SR A  ST+ S RS    GL      E  RK  SRG+ R                  + KKK L RIS+ GLE    A G E+   +W+PS+YTSRPEEW+RPPPSVIKQRWDDS K+FVP+ NY+FDGLYRRHHPLD     D      HR +  +R+        +   +EG+R   +G+ +  SR  G   +S T    L G A GG   A+R++++++EEYGTFFDGMTQSA +L+QHMI DS SWGSVDD IG LLRRAAFFIVEHPSPATRAELA AR +DL AK
Sbjct:   37 IDKQARVWLARRAVHLQKVKVGLTSRVSKLTDMLASSDDSRSISTVFGQIDRDYRKYDRIIAEMQAREDEMAVTFVEKVLERRAADIGGAWTRFVGAATEYSAGRRKRSDARRAHPYPASGDKRAAASEIHDEKLMRLMERYEIPAHAKALPSAYLRAALPMHLKLRSERLVSVEKGHTQNVVSIDGTQRQKRRRVNTLLPS-SNEEVGARQDGGGVFMPAVQCNSLDEKMSSISPATAAATITTAAGAINSPSRFSSFEGKRSGAHSCERRT----AAGGYDGAGGIGCRGSDGGGASGDEDFGFVERHQTLTRQTSRHAGDGAENVGLDSAGSQRW------EGGGGVSTSGWESVWDAEREKRGLTGDAGSRFPGSLVRQDMPSGLAETVERLCAAAFLRGHVPHGLMPKGTTPEEAYRRYLELPPSLAKIRHEQLCTEASQPVASALRARGYTVLEQLLPLSKLEHLFSQAGSGASETLAAVSIASEIKPKRGVGGCGNGS---------GDDLFSPLSPFSRRCL-ARSRAAPISTQRSPRSRRREGLDDCVSDESVRKDGSRGSGRVTSRSXXXXXXXXXXXSGEAKKKGLLRISMQGLELPSRAAGMEQGNGRWDPSRYTSRPEEWIRPPPSVIKQRWDDSAKAFVPVNNYTFDGLYRRHHPLDHCCDED------HRHVDNERDMVTRGGGDDNWCSEGKRDGAMGQEEHPSRPGGLYRSSPTAADPLSG-AAGGSCFAKRVESIMQEEYGTFFDGMTQSATELYQHMINDSGSWGSVDDSIGILLRRAAFFIVEHPSPATRAELAVARERDLVAK 832          
BLAST of mRNA_P-fluviatile_contig13.1752.1 vs. uniprot
Match: A0A836CBX2_9STRA (C2H2-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBX2_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 7.900e-15
Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 0
Query:  852 RDLPSGLRESVERLCAAAFLRGHVPRGLMPEGTTPGEAYQRYLELPPSLAKIRHEQLCTEASKPVASALRGRGYITVEQLLPLSKLECLVGQAGAGSGETLAAVSLARELR 962
            RD+P GL +   RL  AA LR  VP   MP GT+   A++ YL LPPSLAKI+HEQ   +A++P A+AL   G+  +  L+P+SK+  ++ + G  +   LAA  LA ELR
Sbjct: 1332 RDIPGGLHDCTGRLLRAALLRSFVP-STMPAGTSAEIAFRHYLALPPSLAKIKHEQDAAKAARPHAAALSAAGFHLIGHLMPISKMARVMQELGVPAAAILAAQDLAEELR 1441          
BLAST of mRNA_P-fluviatile_contig13.1752.1 vs. uniprot
Match: A0A7S2E736_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E736_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 4.820e-11
Identity = 160/683 (23.43%), Postives = 253/683 (37.04%), Query Frame = 0
Query:  315 LVHDGVEQRVRVEVVEPLLRTLLAETTRQITEQRGELAAIVQYVYSLAASRLQPFVRGTLARRKLADASWELFHNAFLCAAVEIQRMFRGYTARRRARAALVLLASTRRGALALARVRGVLLRQRVARK---------WDILLDRQAVEIQRVFRG-HRSRGRVRSA--LKDRVRAQSAELQGWASLVLQKQARV----WLARRAVDLKRVEVGLTSRVSELAERLASSDDSRSVSAVFGQ----IDKDYRKYEKIIAEMKAREEKMAITFVEKVLESRDADIEGAWARFVGAATEYGKSLKQQSEARRTHPHLVSHDYGIRSTELHDEKLLLLMERYAVPARARTLPSAFLRVALPMHLRLRGGSLRPPAQNGNQRNKRKRICDITPSPTGGQSPAELETGGAFASRVETTVTKSAXXXXXXXXPTYRTGVAPAGYPNKSSSNGGRRSKDCESRSEK----MQTTTGNDNSFDFGCGVGGGRDDSRGGC---NRAVADTSDGGDAWSSVASGSGYPARYFPDSKRVGDGGGPATGWENAWDTERASRGLTGDAGSRFP--GSTVRRDLPSGLRESVERLCAAAFLRGHVP-----------RGLMPE-------------GTTPGE-------AYQRYLELPPSLAKIRHEQLCTEASKPVASALRGRGYITVEQLLPLSKL 937
            L   GV QR+ V  + P+L T L   ++Q+ + R ELA ++Q  Y +A   +Q  +RG L R  L      L + A   AAVEIQR+ R   +++            +R   AL     + ++  + RK         W   +D             +R+   ++ A  + D +R Q  E++      L+  A +    W+ R        +  +  R++    RL    D   +     Q    ID+DYR+YE  + ++  RE+ MA TFV KV   R+ + E AW       T Y   L +  E+ +                   EK     +  A+P+ +   P A L  AL         S++   +  N  N                   E+  GG    R      +S+           RT   P  +P  ++S       +  S+        +T+T   N+            + R  C   N  +  +SD  D       G    +  +  ++ +         WE     E    G +  A + FP  G  +RRDLP GL +++ER   AA LR +             R   P               T  G+       AYQ YL+LPP L K+  E +C++  +P+ S L   GY  + QLLP  K+
Sbjct:  111 LAQSGVWQRIDVHSLVPILITNLHRCSKQLRQVRTELAILIQSTYEMAVPHVQKVIRGHLTRTTLNSMRRGLTNLARFAAAVEIQRISRSLLSKK----------EMQRRHHALCHAMAIRIQTHIRRKLACIEYQRRWKKYIDEXXXXXXXXXXSLYRNWKMIQIAKRIADELRRQREEMERAKIAQLRSNAAILIQSWIRRHLAKWAVHDKRIEIRLNY---RLLKFLDQFMIDGDLWQFLKRIDEDYRRYEDTMLDILEREDVMAATFVSKVTRLRENEHESAW-------TAYKDLLLRLRESHKM------------------EKTNHSQDSPAIPSSSLAPPRASLIRAL------ESLSIKEHTKLTNMGN------------------GEIS-GGELGDRFSMYREESSQWRQYQQQKKRRT---PRCHPIANNSTRNNTISNYHSKKSNGFFPKETSTRAKNALHL---------EGRLSCCRQNETLPLSSDNCDN-----DGQSITSNKYSSTRTMAK-----VDWEPDRCREMDRMGFSFLASAHFPSGGDILRRDLPGGLDDTLERFLRAASLRSYSTSSQNINALYEKRNTDPPKTQIENQCIDDIGNTNEGDGKQNDKTAYQIYLDLPPGLKKVHFEAICSDRIRPLVSKLHHMGYTHIRQLLPREKM 708          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G868_ECTSI9.470e-23153.03C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A836CBX2_9STRA7.900e-1545.05C2H2-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2E736_9STRA4.820e-1123.43Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 358..380
e-value: 76.0
score: 6.4
coord: 390..412
e-value: 19.0
score: 11.4
coord: 483..505
e-value: 120.0
score: 4.8
coord: 447..469
e-value: 25.0
score: 10.4
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 393..412
e-value: 0.0094
score: 15.7
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 448..477
score: 8.755
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 359..386
score: 7.181
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 394..420
score: 9.157
NoneNo IPR availableGENE3D1.20.5.190coord: 360..410
e-value: 1.3E-7
score: 33.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:1308289..1319069 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1752.1mRNA_P-fluviatile_contig13.1752.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig13 1308289..1320217 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig13.1752.1 ID=prot_P-fluviatile_contig13.1752.1|Name=mRNA_P-fluviatile_contig13.1752.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1376bp
MKPDCLAMVQLGKGMKLQRREILDRLRIEEARREYIEWELGVAVEKTESR
VRRMEAARIIWSKWCSSKQSKPSPLNAVLDSHSGRRLWREFIQNELAKDN
NAPSRHQPSRWTARRGGAKDSDEFSKDHQTQSCNGSFEVSILPEVATSGL
EMVACNQREWNATGDSPVIVAKLHVALERVSWQEDAKKSGGMGVSEFCRE
WPRDCILPSFIDRTLLEPAWSAGEQAPHDQGANVDALVPARQEVRREVER
LYFAEFLGSSEGQTFVVHAVQDGTLEPTEVQPLVQQMTEGAQFDEDAQGF
RRIIAHGDQWMLSRLVHDGVEQRVRVEVVEPLLRTLLAETTRQITEQRGE
LAAIVQYVYSLAASRLQPFVRGTLARRKLADASWELFHNAFLCAAVEIQR
MFRGYTARRRARAALVLLASTRRGALALARVRGVLLRQRVARKWDILLDR
QAVEIQRVFRGHRSRGRVRSALKDRVRAQSAELQGWASLVLQKQARVWLA
RRAVDLKRVEVGLTSRVSELAERLASSDDSRSVSAVFGQIDKDYRKYEKI
IAEMKAREEKMAITFVEKVLESRDADIEGAWARFVGAATEYGKSLKQQSE
ARRTHPHLVSHDYGIRSTELHDEKLLLLMERYAVPARARTLPSAFLRVAL
PMHLRLRGGSLRPPAQNGNQRNKRKRICDITPSPTGGQSPAELETGGAFA
SRVETTVTKSASASASASAPTYRTGVAPAGYPNKSSSNGGRRSKDCESRS
EKMQTTTGNDNSFDFGCGVGGGRDDSRGGCNRAVADTSDGGDAWSSVASG
SGYPARYFPDSKRVGDGGGPATGWENAWDTERASRGLTGDAGSRFPGSTV
RRDLPSGLRESVERLCAAAFLRGHVPRGLMPEGTTPGEAYQRYLELPPSL
AKIRHEQLCTEASKPVASALRGRGYITVEQLLPLSKLECLVGQAGAGSGE
TLAAVSLARELRPKQDASGAGGAGGGSSSSTGGGHGVFSPLPSFSRRGLF
AGSRRASSSTEGSGRSGLGGAGFGEGRRKVESRGASRSMINISCGYPGGD
RSCVTKKKKKALRISLSGLEFEGDARGAEKRSQWEPSKYTSRPEEWVRPP
PSVIKQRWDDSTKSFVPIKNYSFDGLYRRHHPLDLPDGNDEEGGSHHRQM
GYDRNPADVDHEGNVRLAEGERHSTVGRRDCSSRVDGTPPASLTRTKILP
GPAGGGDLAARRMKNVLREEYGTFFDGMTQSARDLHQHMIKDSTSWGSVD
DPIGTLLRRAAFFIVEHPSPATRAELAAARAKDLAAKGFGGKTSLARPSA
LAGKFKPTGLELELAQAALAGEQVPTGPAAFREFIRQLDATRAGQHPAAS
SRNTRKPLRPAGRSGGPVRIPAERC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS