mRNA_P-fluviatile_contig13.1752.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1752.1
Unique NamemRNA_P-fluviatile_contig13.1752.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig13.1752.1 vs. uniprot
Match: D7G868_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G868_ECTSI)

HSP 1 Score: 697 bits (1799), Expect = 1.150e-226
Identity = 437/824 (53.03%), Postives = 529/824 (64.20%), Query Frame = 1
Query: 1471 LQKQARVWLARRAVDLKRVEVGLTSRVSELAERLASSDDSRSVSAVFGQIDKDYRKYEKIIAEMKAREEKMAITFVEKVLESRDADIEGAWARFVGAATEYGKSLKQQSEARRTHPHLVSHDYGIRSTELHDEKLLLLMERYAVPARARTLPSAFLRVALPMHLRLRGGSL----RPPAQN-----GNQRNKRKRICDITPSPTGGQSPAELETGGAFASRVETTVT--KSAXXXXXXXXPTYRTGVAPAGYPNKSSSNGGRRS--KDCESRSEKMQTTTGNDNSFDFGC----GVGGGRDDSRGGCNRAVADTSD----GGDAWSSVASGSGYPARYFPDSKRVGDGGGPATGWENAWDTERASRGLTGDAGSRFPGSTVRRDLPSGLRESVERLCAAAFLRGHVPRGLMPEGTTPGEAYQRYLELPPSLAKIRHEQLCTEASKPVASALRGRGYITVEQLLPLSKLECLVGQAGAGSGETLAAVSLARELRPKQDASGAGXXXXXXXXXXXGGHGVFSPLPSFSRRGLFAGSRRASSSTEGSGRS----GLGGAGFGEGRRKVESRGASRSMINISCGYPGGDRSCVTKKKKKAL-RISLSGLEFEGDARGAEK-RSQWEPSKYTSRPEEWVRPPPSVIKQRWDDSTKSFVPIKNYSFDGLYRRHHPLDLPDGNDEEGGSHHRQMGYDRNPADVDHEGNVRLAEGERHSTVGRRDCSSRVDGTPPASLTRTKILPGPAGGGDLAARRMKNVLREEYGTFFDGMTQSARDLHQHMIKDSTSWGSVDDPIGTLLRRAAFFIVEHPSPATRAELAAARAKDLAAK 3861
            + KQARVWLARRAV L++V+VGLTSRVS+L + LASSDDSRS+S VFGQID+DYRKY++IIAEM+ARE++MA+TFVEKVLE R ADI GAW RFVGAATEY    +++S+ARR HP+  S D    ++E+HDEKL+ LMERY +PA A+ LPSA+LR ALPMHL+LR   L    +   QN     G QR KR+R+  + PS +  +  A  + GG F   V+      K +         T  T       P++ SS  G+RS    CE R+       G D +   GC    G G   D+  G   R    T       GD   +V   S    R+       G GG   +GWE+ WD ER  RGLTGDAGSRFPGS VR+D+PSGL E+VERLCAAAFLRGHVP GLMP+GTTP EAY+RYLELPPSLAKIRHEQLCTEAS+PVASALR RGY  +EQLLPLSKLE L  QAG+G+ ETLAAVS+A E++PK+   G G            G  +FSPL  FSRR L A SR A  ST+ S RS    GL      E  RK  SRG+ R                  + KKK L RIS+ GLE    A G E+   +W+PS+YTSRPEEW+RPPPSVIKQRWDDS K+FVP+ NY+FDGLYRRHHPLD     D      HR +  +R+        +   +EG+R   +G+ +  SR  G   +S T    L G A GG   A+R++++++EEYGTFFDGMTQSA +L+QHMI DS SWGSVDD IG LLRRAAFFIVEHPSPATRAELA AR +DL AK
Sbjct:   37 IDKQARVWLARRAVHLQKVKVGLTSRVSKLTDMLASSDDSRSISTVFGQIDRDYRKYDRIIAEMQAREDEMAVTFVEKVLERRAADIGGAWTRFVGAATEYSAGRRKRSDARRAHPYPASGDKRAAASEIHDEKLMRLMERYEIPAHAKALPSAYLRAALPMHLKLRSERLVSVEKGHTQNVVSIDGTQRQKRRRVNTLLPS-SNEEVGARQDGGGVFMPAVQCNSLDEKMSSISPATAAATITTAAGAINSPSRFSSFEGKRSGAHSCERRT----AAGGYDGAGGIGCRGSDGGGASGDEDFGFVERHQTLTRQTSRHAGDGAENVGLDSAGSQRW------EGGGGVSTSGWESVWDAEREKRGLTGDAGSRFPGSLVRQDMPSGLAETVERLCAAAFLRGHVPHGLMPKGTTPEEAYRRYLELPPSLAKIRHEQLCTEASQPVASALRARGYTVLEQLLPLSKLEHLFSQAGSGASETLAAVSIASEIKPKRGVGGCGNGS---------GDDLFSPLSPFSRRCL-ARSRAAPISTQRSPRSRRREGLDDCVSDESVRKDGSRGSGRVTSRSXXXXXXXXXXXSGEAKKKGLLRISMQGLELPSRAAGMEQGNGRWDPSRYTSRPEEWIRPPPSVIKQRWDDSAKAFVPVNNYTFDGLYRRHHPLDHCCDED------HRHVDNERDMVTRGGGDDNWCSEGKRDGAMGQEEHPSRPGGLYRSSPTAADPLSG-AAGGSCFAKRVESIMQEEYGTFFDGMTQSATELYQHMINDSGSWGSVDDSIGILLRRAAFFIVEHPSPATRAELAVARERDLVAK 832          
BLAST of mRNA_P-fluviatile_contig13.1752.1 vs. uniprot
Match: A0A836CBX2_9STRA (C2H2-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBX2_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.100e-14
Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 1
Query: 2554 RDLPSGLRESVERLCAAAFLRGHVPRGLMPEGTTPGEAYQRYLELPPSLAKIRHEQLCTEASKPVASALRGRGYITVEQLLPLSKLECLVGQAGAGSGETLAAVSLARELR 2886
            RD+P GL +   RL  AA LR  VP   MP GT+   A++ YL LPPSLAKI+HEQ   +A++P A+AL   G+  +  L+P+SK+  ++ + G  +   LAA  LA ELR
Sbjct: 1332 RDIPGGLHDCTGRLLRAALLRSFVP-STMPAGTSAEIAFRHYLALPPSLAKIKHEQDAAKAARPHAAALSAAGFHLIGHLMPISKMARVMQELGVPAAAILAAQDLAEELR 1441          
BLAST of mRNA_P-fluviatile_contig13.1752.1 vs. uniprot
Match: A0A7S2E736_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E736_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 6.580e-11
Identity = 160/683 (23.43%), Postives = 253/683 (37.04%), Query Frame = 1
Query:  943 LVHDGVEQRVRVEVVEPLLRTLLAETTRQITEQRGELAAIVQYVYSLAASRLQPFVRGTLARRKLADASWELFHNAFLCAAVEIQRMFRGYTARRRARAALVLLASTRRGALALARVRGVLLRQRVARK---------WDILLDRQAVEIQRVFRG-HRSRGRVRSA--LKDRVRAQSAELQGWASLVLQKQARV----WLARRAVDLKRVEVGLTSRVSELAERLASSDDSRSVSAVFGQ----IDKDYRKYEKIIAEMKAREEKMAITFVEKVLESRDADIEGAWARFVGAATEYGKSLKQQSEARRTHPHLVSHDYGIRSTELHDEKLLLLMERYAVPARARTLPSAFLRVALPMHLRLRGGSLRPPAQNGNQRNKRKRICDITPSPTGGQSPAELETGGAFASRVETTVTKSAXXXXXXXXPTYRTGVAPAGYPNKSSSNGGRRSKDCESRSEK----MQTTTGNDNSFDFGCGVGGGRDDSRGGC---NRAVADTSDGGDAWSSVASGSGYPARYFPDSKRVGDGGGPATGWENAWDTERASRGLTGDAGSRFP--GSTVRRDLPSGLRESVERLCAAAFLRGHVP-----------RGLMPE-------------GTTPGE-------AYQRYLELPPSLAKIRHEQLCTEASKPVASALRGRGYITVEQLLPLSKL 2811
            L   GV QR+ V  + P+L T L   ++Q+ + R ELA ++Q  Y +A   +Q  +RG L R  L      L + A   AAVEIQR+ R   +++            +R   AL     + ++  + RK         W   +D             +R+   ++ A  + D +R Q  E++      L+  A +    W+ R        +  +  R++    RL    D   +     Q    ID+DYR+YE  + ++  RE+ MA TFV KV   R+ + E AW       T Y   L +  E+ +                   EK     +  A+P+ +   P A L  AL         S++   +  N  N                   E+  GG    R      +S+           RT   P  +P  ++S       +  S+        +T+T   N+            + R  C   N  +  +SD  D       G    +  +  ++ +         WE     E    G +  A + FP  G  +RRDLP GL +++ER   AA LR +             R   P               T  G+       AYQ YL+LPP L K+  E +C++  +P+ S L   GY  + QLLP  K+
Sbjct:  111 LAQSGVWQRIDVHSLVPILITNLHRCSKQLRQVRTELAILIQSTYEMAVPHVQKVIRGHLTRTTLNSMRRGLTNLARFAAAVEIQRISRSLLSKK----------EMQRRHHALCHAMAIRIQTHIRRKLACIEYQRRWKKYIDEXXXXXXXXXXSLYRNWKMIQIAKRIADELRRQREEMERAKIAQLRSNAAILIQSWIRRHLAKWAVHDKRIEIRLNY---RLLKFLDQFMIDGDLWQFLKRIDEDYRRYEDTMLDILEREDVMAATFVSKVTRLRENEHESAW-------TAYKDLLLRLRESHKM------------------EKTNHSQDSPAIPSSSLAPPRASLIRAL------ESLSIKEHTKLTNMGN------------------GEIS-GGELGDRFSMYREESSQWRQYQQQKKRRT---PRCHPIANNSTRNNTISNYHSKKSNGFFPKETSTRAKNALHL---------EGRLSCCRQNETLPLSSDNCDN-----DGQSITSNKYSSTRTMAK-----VDWEPDRCREMDRMGFSFLASAHFPSGGDILRRDLPGGLDDTLERFLRAASLRSYSTSSQNINALYEKRNTDPPKTQIENQCIDDIGNTNEGDGKQNDKTAYQIYLDLPPGLKKVHFEAICSDRIRPLVSKLHHMGYTHIRQLLPREKM 708          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1752.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G868_ECTSI1.150e-22653.03C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A836CBX2_9STRA1.100e-1445.05C2H2-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2E736_9STRA6.580e-1123.43Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:1308289..1320217 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Ec32 ortholog descriptionC2H2 zinc finger protein
Ec32 orthologEc-12_001290.1
Hectar predicted targeting categoryother localisation
Exons20
Model size5276
Cds size4128
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815557.194067-CDS-P-fluviatile_contig13:1308288..13083421622815557.194067-CDS-P-fluviatile_contig13:1308288..1308342Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1308289..1308342 +
1693562234.9251363-CDS-P-fluviatile_contig13:1308288..13083421693562234.9251363-CDS-P-fluviatile_contig13:1308288..1308342Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1308289..1308342 +
1622815557.2064369-CDS-P-fluviatile_contig13:1308765..13089291622815557.2064369-CDS-P-fluviatile_contig13:1308765..1308929Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1308766..1308929 +
1693562234.9343662-CDS-P-fluviatile_contig13:1308765..13089291693562234.9343662-CDS-P-fluviatile_contig13:1308765..1308929Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1308766..1308929 +
1622815557.2176542-CDS-P-fluviatile_contig13:1309164..13093681622815557.2176542-CDS-P-fluviatile_contig13:1309164..1309368Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1309165..1309368 +
1693562234.9472675-CDS-P-fluviatile_contig13:1309164..13093681693562234.9472675-CDS-P-fluviatile_contig13:1309164..1309368Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1309165..1309368 +
1622815557.2290795-CDS-P-fluviatile_contig13:1309533..13097861622815557.2290795-CDS-P-fluviatile_contig13:1309533..1309786Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1309534..1309786 +
1693562234.9570656-CDS-P-fluviatile_contig13:1309533..13097861693562234.9570656-CDS-P-fluviatile_contig13:1309533..1309786Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1309534..1309786 +
1622815557.240693-CDS-P-fluviatile_contig13:1309954..13101161622815557.240693-CDS-P-fluviatile_contig13:1309954..1310116Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1309955..1310116 +
1693562234.9720514-CDS-P-fluviatile_contig13:1309954..13101161693562234.9720514-CDS-P-fluviatile_contig13:1309954..1310116Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1309955..1310116 +
1622815557.25317-CDS-P-fluviatile_contig13:1310424..13105681622815557.25317-CDS-P-fluviatile_contig13:1310424..1310568Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1310425..1310568 +
1693562234.983549-CDS-P-fluviatile_contig13:1310424..13105681693562234.983549-CDS-P-fluviatile_contig13:1310424..1310568Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1310425..1310568 +
1622815557.2649264-CDS-P-fluviatile_contig13:1311095..13112811622815557.2649264-CDS-P-fluviatile_contig13:1311095..1311281Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1311096..1311281 +
1693562234.9918845-CDS-P-fluviatile_contig13:1311095..13112811693562234.9918845-CDS-P-fluviatile_contig13:1311095..1311281Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1311096..1311281 +
1622815557.2746017-CDS-P-fluviatile_contig13:1311990..13121081622815557.2746017-CDS-P-fluviatile_contig13:1311990..1312108Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1311991..1312108 +
1693562235.0002458-CDS-P-fluviatile_contig13:1311990..13121081693562235.0002458-CDS-P-fluviatile_contig13:1311990..1312108Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1311991..1312108 +
1622815557.2843513-CDS-P-fluviatile_contig13:1312586..13126541622815557.2843513-CDS-P-fluviatile_contig13:1312586..1312654Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1312587..1312654 +
1693562235.008773-CDS-P-fluviatile_contig13:1312586..13126541693562235.008773-CDS-P-fluviatile_contig13:1312586..1312654Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1312587..1312654 +
1622815557.294226-CDS-P-fluviatile_contig13:1312962..13130871622815557.294226-CDS-P-fluviatile_contig13:1312962..1313087Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1312963..1313087 +
1693562235.0176542-CDS-P-fluviatile_contig13:1312962..13130871693562235.0176542-CDS-P-fluviatile_contig13:1312962..1313087Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1312963..1313087 +
1622815557.3053746-CDS-P-fluviatile_contig13:1313765..13139041622815557.3053746-CDS-P-fluviatile_contig13:1313765..1313904Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1313766..1313904 +
1693562235.0272415-CDS-P-fluviatile_contig13:1313765..13139041693562235.0272415-CDS-P-fluviatile_contig13:1313765..1313904Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1313766..1313904 +
1622815557.3171396-CDS-P-fluviatile_contig13:1314369..13144561622815557.3171396-CDS-P-fluviatile_contig13:1314369..1314456Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1314370..1314456 +
1693562235.0370111-CDS-P-fluviatile_contig13:1314369..13144561693562235.0370111-CDS-P-fluviatile_contig13:1314369..1314456Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1314370..1314456 +
1622815557.3270235-CDS-P-fluviatile_contig13:1314785..13149731622815557.3270235-CDS-P-fluviatile_contig13:1314785..1314973Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1314786..1314973 +
1693562235.0465875-CDS-P-fluviatile_contig13:1314785..13149731693562235.0465875-CDS-P-fluviatile_contig13:1314785..1314973Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1314786..1314973 +
1622815557.3361213-CDS-P-fluviatile_contig13:1315437..13156581622815557.3361213-CDS-P-fluviatile_contig13:1315437..1315658Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1315438..1315658 +
1693562235.0647688-CDS-P-fluviatile_contig13:1315437..13156581693562235.0647688-CDS-P-fluviatile_contig13:1315437..1315658Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1315438..1315658 +
1622815557.3457026-CDS-P-fluviatile_contig13:1315724..13162861622815557.3457026-CDS-P-fluviatile_contig13:1315724..1316286Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1315725..1316286 +
1693562235.077681-CDS-P-fluviatile_contig13:1315724..13162861693562235.077681-CDS-P-fluviatile_contig13:1315724..1316286Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1315725..1316286 +
1622815557.3552535-CDS-P-fluviatile_contig13:1316486..13171501622815557.3552535-CDS-P-fluviatile_contig13:1316486..1317150Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1316487..1317150 +
1693562235.0870783-CDS-P-fluviatile_contig13:1316486..13171501693562235.0870783-CDS-P-fluviatile_contig13:1316486..1317150Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1316487..1317150 +
1622815557.3664186-CDS-P-fluviatile_contig13:1317529..13179011622815557.3664186-CDS-P-fluviatile_contig13:1317529..1317901Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1317530..1317901 +
1693562235.0970416-CDS-P-fluviatile_contig13:1317529..13179011693562235.0970416-CDS-P-fluviatile_contig13:1317529..1317901Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1317530..1317901 +
1622815557.375745-CDS-P-fluviatile_contig13:1318210..13183601622815557.375745-CDS-P-fluviatile_contig13:1318210..1318360Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1318211..1318360 +
1693562235.3204913-CDS-P-fluviatile_contig13:1318210..13183601693562235.3204913-CDS-P-fluviatile_contig13:1318210..1318360Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1318211..1318360 +
1622815557.385025-CDS-P-fluviatile_contig13:1318571..13186791622815557.385025-CDS-P-fluviatile_contig13:1318571..1318679Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1318572..1318679 +
1693562235.3321135-CDS-P-fluviatile_contig13:1318571..13186791693562235.3321135-CDS-P-fluviatile_contig13:1318571..1318679Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1318572..1318679 +
1622815557.39422-CDS-P-fluviatile_contig13:1318910..13190691622815557.39422-CDS-P-fluviatile_contig13:1318910..1319069Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1318911..1319069 +
1693562235.3439171-CDS-P-fluviatile_contig13:1318910..13190691693562235.3439171-CDS-P-fluviatile_contig13:1318910..1319069Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1318911..1319069 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815557.4056666-UTR-P-fluviatile_contig13:1319069..13202171622815557.4056666-UTR-P-fluviatile_contig13:1319069..1320217Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1319070..1320217 +
1693562235.3522305-UTR-P-fluviatile_contig13:1319069..13202171693562235.3522305-UTR-P-fluviatile_contig13:1319069..1320217Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1319070..1320217 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1752.1prot_P-fluviatile_contig13.1752.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 1308289..1319069 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1752.1

>prot_P-fluviatile_contig13.1752.1 ID=prot_P-fluviatile_contig13.1752.1|Name=mRNA_P-fluviatile_contig13.1752.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1376bp
MKPDCLAMVQLGKGMKLQRREILDRLRIEEARREYIEWELGVAVEKTESR
VRRMEAARIIWSKWCSSKQSKPSPLNAVLDSHSGRRLWREFIQNELAKDN
NAPSRHQPSRWTARRGGAKDSDEFSKDHQTQSCNGSFEVSILPEVATSGL
EMVACNQREWNATGDSPVIVAKLHVALERVSWQEDAKKSGGMGVSEFCRE
WPRDCILPSFIDRTLLEPAWSAGEQAPHDQGANVDALVPARQEVRREVER
LYFAEFLGSSEGQTFVVHAVQDGTLEPTEVQPLVQQMTEGAQFDEDAQGF
RRIIAHGDQWMLSRLVHDGVEQRVRVEVVEPLLRTLLAETTRQITEQRGE
LAAIVQYVYSLAASRLQPFVRGTLARRKLADASWELFHNAFLCAAVEIQR
MFRGYTARRRARAALVLLASTRRGALALARVRGVLLRQRVARKWDILLDR
QAVEIQRVFRGHRSRGRVRSALKDRVRAQSAELQGWASLVLQKQARVWLA
RRAVDLKRVEVGLTSRVSELAERLASSDDSRSVSAVFGQIDKDYRKYEKI
IAEMKAREEKMAITFVEKVLESRDADIEGAWARFVGAATEYGKSLKQQSE
ARRTHPHLVSHDYGIRSTELHDEKLLLLMERYAVPARARTLPSAFLRVAL
PMHLRLRGGSLRPPAQNGNQRNKRKRICDITPSPTGGQSPAELETGGAFA
SRVETTVTKSASASASASAPTYRTGVAPAGYPNKSSSNGGRRSKDCESRS
EKMQTTTGNDNSFDFGCGVGGGRDDSRGGCNRAVADTSDGGDAWSSVASG
SGYPARYFPDSKRVGDGGGPATGWENAWDTERASRGLTGDAGSRFPGSTV
RRDLPSGLRESVERLCAAAFLRGHVPRGLMPEGTTPGEAYQRYLELPPSL
AKIRHEQLCTEASKPVASALRGRGYITVEQLLPLSKLECLVGQAGAGSGE
TLAAVSLARELRPKQDASGAGGAGGGSSSSTGGGHGVFSPLPSFSRRGLF
AGSRRASSSTEGSGRSGLGGAGFGEGRRKVESRGASRSMINISCGYPGGD
RSCVTKKKKKALRISLSGLEFEGDARGAEKRSQWEPSKYTSRPEEWVRPP
PSVIKQRWDDSTKSFVPIKNYSFDGLYRRHHPLDLPDGNDEEGGSHHRQM
GYDRNPADVDHEGNVRLAEGERHSTVGRRDCSSRVDGTPPASLTRTKILP
GPAGGGDLAARRMKNVLREEYGTFFDGMTQSARDLHQHMIKDSTSWGSVD
DPIGTLLRRAAFFIVEHPSPATRAELAAARAKDLAAKGFGGKTSLARPSA
LAGKFKPTGLELELAQAALAGEQVPTGPAAFREFIRQLDATRAGQHPAAS
SRNTRKPLRPAGRSGGPVRIPAERC*
back to top

mRNA from alignment at P-fluviatile_contig13:1308289..1320217+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1752.1 ID=mRNA_P-fluviatile_contig13.1752.1|Name=mRNA_P-fluviatile_contig13.1752.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11929bp|location=Sequence derived from alignment at P-fluviatile_contig13:1308289..1320217+ (Porterinema fluviatile SAG_2381)
ATGAAACCTGACTGCCTCGCGATGGTTCAGCTAGGGAAAGGCATGAAATT ACAGGTGGGAAAATGCTGTGAAGGGCTCTCCTCTGGTTGTAGATTTCCAG CGCGCGGATGATGCACACAGGAGCACTGTGCATGTGTCGTGAAATGCATC ACTTCAGATGAAACCCCGCGTACAACGAAATCTCTGTGTGAACGATAGCT AGGCACTGCTTGGTCATGCAGGTACAAAGACGAGTTCATGCACAACCGCG ACGCCGCGTCGTCATTTGTCCTACCTTTCCTGTGACTTCACGAACTACGA GGTAGATTGGAATTTCCATAAAAGGCCAGACAACGGTAAATTCATCCAGA GGTGGTGCATGGGCACTTAAACGTTGTTAAATACAACATTGATACTGCTC CTGGAGCTTCGAAAGGCCTGCATGTGGGGGGAGGTTCGGTTCCTGTCTCA ACCCCTTGCGCTTCGCCCGTCTCACAGAGGCGGGAAATTCTTGACCGGTT ACGCATAGAGGAAGCGCGACGGGAATACATCGAGTGGGAGCTCGGTGTTG CTGTCGAAAAGACGGAGTCACGTGTGCGTAGAATGGAAGCCGCCCGCATC ATTTGGAGCAAGTGGTGCTCTTCTAAACAAAGCAAGCCGAGGTAAGAGCG TTAGCTGGTGCCCAAGATATGATCACTGTCTGTGACCATACTTGATACCT GTTGTTTCCGAATTGGTGACGGGAGAGTCAATATTTCTGGACATGTACCC AGAACCCTTACACATGAAGTCGGGTGTTCAATCATGTCGGGAGATATTCG GGCGGCGTGTTGCGACACGACGTTGCCCGTATCCTCTTGACATTCGTTCC TCCGTGAAATCCATCGTCGTCGTCAGCCCACTGAACGCGGTTCTGGACAG CCATTCCGGCCGGCGCTTGTGGAGAGAGTTTATTCAAAATGAGCTCGCTA AGGACAACAACGCACCTTCCCGTCACCAGCCATCTCGCTGGACTGCGAGG CGCGGGGGTGCTAAAGATAGCGACGAATTTTCCAAGGATCACCAAACACA GTCTTGTAACGGGTCGTTCGAAGTGTCGATGTATAGCACAAGGTCGCTCG GAGAAGAAGCAACGACATCGTCCTCCTGCCAGAGTAAGACAGGAGAGAAG CCTAAACTTTCGAAAACGCGATCCAGGAACGAAGATTTGGGTAAGCAGCC GTCGGAGGAAGCGGGCTCGGCATTCACCAATGCGCTGGATGCGAGCCTTC CAGAAGTCGCGACCAGCGGGTTGGAGATGGTTGCATGTAATCAGAGGGAG TGGAACGCGACGGGCGATTCACCTGTCATTGTCGCTAAGCTCCACGTGGC GCTCGAGAGAGTATCATGGCAGGAAGATGCAAAGAAGAGTGGCGGGATGG GTGTCAGCGAGTTTTGCAGGGAATGGCCGCGAGACTGCATATTACCATCG TTCATCGACCGAACACTTCTGGAGCCTGCCTGGTCGGCTGGGGAACAGGT ACGCTCCTGAGTTCACGAAGTAAAAGGCCACGAGGGGGGATCAGAGAGTT TTGTATGACAGATGCTTGCCATAACGTAAGAACGAGAGAATCTGGGTGGT ATTGCTGCACTCGCCATCATATTCCACGACTTTGATTGCGCGGCGCCGGT GTTGGCCAACTGCTAGGCTCCACATGATCAAGGCGCCAACGTCGACGCAC TTGTTCCTGCGAGGCAAGAAGTGCGGCGAGAAGTAGAGCGTTTGTATTTC GCGGAGTTCTTGGGCAGCAGCGAGGGACAGACGTTCGTGGTCCATGCAGT CCAGGACGGGACCCTCGAGCCAACAGAGGTGAGAGGCTCTTGGGCTAGTT TGAAAGCCCTGCCACGACCGCTAATGCTCCGGGAACAATCCCCTCAACTC ACGTTACAGAAAAAGAAGAACGCAGGGCGACGTACGGTGACTTGTGGCTG GTGGGCAAAAATTGGCGAACTGCCTGTGTGAGTCACATGGTCCCTTTCTG CAAACGGCTGTACACAGTTTTTTTCGTCATCACAACAGCGGTCGTGCAGC CCTTCCCCAAAATTTTCGCTCGACCTGCGCATGAATCAGTCACCATGAAT CCTGTAGACTCCCACCTTTTTGCACATACGTTGTAGGTCCAACCACTGGT GCAACAAATGACCGAGGGGGCACAGTTCGACGAGGATGCTCAAGGCTTCC GACGAATTATTGCACATGGCGACCAATGGATGCTCTCCCGGTTGGTGCAT GATGGAGTGGAGCAGCGGGTTCGGGTGGAGGTACGTTAGTGTTGTACCGC CAAAACAGAACGGCTACCCGTTCAAGGTAATGCGGGACATCAACACTGGT CTTTTCTCTACACACTGACGGCGTATCGTGCCCGTACTTTGCATGAAAAC TCACATTGCTGACTCCCAAAGTCGAGTGAGTCACACGGTTGCCAAGTGCT CACGGTACATTCTGTATCGTGCAGTCGATCTTCCGGAATCTGCCGGGACA ACTACAAACAAACTTCGTCGTAGGATCGGCACGTCAACAGGACGATTTAG CCTTTCGAAAAACCGCGAATGCTTGACGTCGATTTGGTATTGGAGGACAT GCACCCAAACGGGCTATTATGGCTGTTGAGATCCTGACGACTTCGCTGTG AAAGCAATCGCCGAGGCAAAGCTACTGTTTCCTCTGAAGAATAAAGGTAA ATATATGGACTTGAGCCGCTGCGTAACATTCAGCAGCTATTAATCGCAGA AGCGTCGATTCCCACTTTCCCTTCATTTCTGCTCGACCGTGTTCCTTCCG CCAACAGGTAGTGGAACCTTTGCTCCGAACTCTACTGGCTGAGACCACCC GCCAAATCACCGAACAGCGCGGCGAGCTTGCAGCGATCGTGCAGTACGTC TACTCTCTCGCCGCCTCGCGGTTGCAGCCATTTGTGCGCGGTACCCTGGC GCGGCGAAAGCTAGCGGACGCAAGCTGGGAGTTGTTTCACAACGTGAGTG AGAAGGAATCCGGCGACTGAATAGCAGTGCTATTACCGGTCTAGATGTGC TGCGTTTCATGCTGATTACGTCCAACTCGAAGCAAGCAGCTCGCCGAGGA GGGAGCCTCCAGCAGGCTGCAGCAGGGGAACCTCGCGCATCGCAAACCAA ACACGACGCGAAGTTAGGTTTGTAGCGCCGCCAGTGGCTTCGACTCCGAG GCATGCTTCTACGAGGTCGAGGGTAGAAAGGATCGTACGCTCGTGGGGCG CTTAGATACCAACCAACGTCGTCGCTCGAATCTTAGTACACCTCGGTGCT TGGGAGCCGTCAAATACCAATCGGACCTCAGACAAAGCAGAGATATGGCG TCAGCCCTTGAACACCGAGCTGAGCTGAAGGTTGAAGGCATATTGTCGGT TCAAACGTTGATACGGGTGGGAGCCTGGTCTTCGGTGTACCTGAATCAAA GTCGTACCAGTGGTGTCTTCTTCTAGAGGTGGGTCTCGAACCTCACTTAG ACTTGAACACAACACAGTAAGAGCCTCGGGTCCACCACCATTTTTTCTGC TGCTCATCTACAACGCCACGTTCACCCATCAGAAAGCACGTCCTCTCGAT TTCGCCCGTGACTGCGAACTCTTTGCGAAGAACGAGCGACTAATCTTCGA GGACAAGATTCCAGAACACATCATTCCCTTGCTTTCCGGTCGTCGTGCGC AGGCGTTCCTTTGCGCCGCGGTGGAAATCCAGCGAATGTTTCGCGGGTAC ACTGCGCGGAGACGAGCTCGTGCTGCTCTTGTGCTCTTGGCATCAACCAG GCGAGGAGCACTTGCACTGGGTGTTGCAGCGGTGTGTCCGCTGCCTGGAA CAGGCACTAGCCGCCTCACTTATTGTCTCCTCGAAGCTCAAAATTGATTC TGCCTAGCTCGCTCACCTCGCGGGTCAATACCGACGGGACACGCGCAACA AATGCAGAAAGCAAGGAAATTGGTGAACCACCGACAGTGCCCGCTTTGTG AAACACCTTGTAGCGGTCTCCTGTTGCAGATGCTGTCCGACTTGTTCATG ATACCCGAGTCCCCGTTTGTTGATCGATTCCTCAGAATAGAAAACGTTTT TTCTCGTGTCGAGATTGGCGCGACAGAGCACGCCACTGCCGGTGTACGCG CCGATAAGGATGTGGCAGTCCTGACCGTGCACAAGTGCAGGATGAGTTTG TATGCATGGCCAAGGGAACAGCGTTATCGACGTGGGATCACCTTTGTTTC TGTATCATCCGCCGGTGTCACCGTAAGGCAGATTGACGCGGCTCCAAGCC CGTGTCCGGGGTGTTCTGCTGCGACAGCGAGTCGCCAGAAAGTGGGATAT TTTGCTCGATCGACAGGTGAGACCCAGAGCTTATCGCAAAACAACCTTCA TTCGTCCCATAGCTTTGAAAATCCGATAGAAGAATGGTGTTTCCGAATCT TGCTGAACCTAAATTCTGCACTGCATAACCCTGGGTAGGTTGACCTGCCC CTTCGCCTCTCCTACAGCCCCCAGTAAGCCTCTACGCTGCAAAAAGCTGG GGACGAACTTCGGTGCACCCAATCCCTCCCCCTCCGGTGACCTCGACCTC TGTGCTTGTCCATGTCCGTTTCGACACGATTGGCTATTTATCTTGACGTG CAATGCACGCGTGCAATACCATAGGCTGTGGAGATCCAACGCGTTTTTCG GGGGCACCGGTCACGAGGCCGGGTGCGATCGGCCTTGAAGGACCGAGTCC GGGCGCAGAGTGCCGAGCTGCAGGGTTGGGCATCCTTGGTCCTGCAAAAG TAAGCGCAGCCACAACTGTGCGTTTGCGGCTCACGTAGTCAACATTGTCC CGTGTCGACCCGTTTGCTTGATGCTTCGAACTTTTCGGAGTCCGAGAGCG AGCACCGTTTTTTAAAGCGGCTCAGATTACGCCGTACTGCCCTTACCGGG CCCAAGGGTGGGGAATGATAGCACCTCGACTCACGTGTTGCTGTGACACT CGTTGATGCTTCTCTACCGCTGACAAGATAAAAGTGGCTGTTCTTCGTGA CAGTTCCTCCTTGCGTGCGTCACATACTATATATGTACTCGCATCCCCCG CCCATCGTCTGGTCGAAGCGGAGTCGCTCGCCGTGCCAATAGCTGACGCC CTCCGAGCTCGTCGCTTCGAAGTTTGTTGCAGCAGGAAGGCCACCAGCGG CGTGACGCACCAAACTACCCTTTCGCACGGAACAAACATGGCCAATGCCT GTGCTGACGTGCACCTTTGTGCGGCTCTTTCGCCCCGCCGATGAGGGGTT CGTGTTTCCGGTTGTCCTCGCTTGTCACCTCCAGGCCTTGACCTTCCTTT TGGCGGCGGCGGCGCTGAGGTGGTTTCCTTCTTCCCCTGCTTACATTGTT TTGTTGTACGGCGAGAAGAGAATGGCATCATGGACCGGACTGTCTCACTT CATTTTCCTGTCTGTTTGGAGTGGCAGACAAGCACGCGTTTGGCTGGCAC GGCGAGCTGTCGACCTCAAGAGGGTGGAGGTGGGCCTGACCTCGAGGGTT TCAGAGCTTGCCGAAAGGCTGGCGTCCTCCGATGACAGTCGCAGTGTCTC GGCTGTGTTTGGTCAGGTGAGCGGGTGACGAAGCTGAATCCGAAAGCAAG CTGCGTAGTGCCCGGCTACTCACGTAGCTTTTGGATGCTTGTTGGCGCAC ATTATGGTTGAGTTGGGGGGATGTGCTTTCAGAAACGACAAAAGTATGGC AAACCTGAACGGGCAACCACTCGATTTCGGGGTGAGTTTCTGTTGCTTGG AGAGGATTGGTACGCTAGAAATGGCGTCATATCGTCGCGGAATATCGGCA AGTTGTTTTTGGGACATTTGAGGGATAAGACTGTGGCCAGAAATGTAGTG CACATGGAAAACCCGCACGATGCTTACCGCAAAGTCTTGCTCTGTCGCTC CTCGACCTTTGGCACAGGTGGCGTGGGGATCGTTGATTCGAATGGTGCAA TATTAAAGTTGAAACAAAAGCCATCGCTTCTATTTTGGATTGTGAACGAC TCGCCCCGCCTTCCGCCGGAACACACCTCAGATAGACAAGGACTACCGAA AGTACGAGAAAATTATCGCCGAGATGAAAGCCAGGGAAGAAAAAATGGCA ATCACGTTTGTCGAAAAGGTATGCGCCTTGGACCCTGCAAGAGGTGTGGG ATGGGCGGTGTCAGATGCATTGTTCGGTACACGGGAAGCTGAAATCCTAG CTGTTTTGGTTCCCGTGAGCTTAATCATTTGCGACGCGCGAAGTAAATGA GACCCTGAGATCGCTCGCACGTAGTGCCACGATCAAATTGGCACGTTGCA GGCGTTCGCCCCCACGCCGAGACACAGACTCGAATGAATATCTGCTTCTC ATAATGGCAGAGTTCCGTGGACAGATGCACCGCTGTACCAAATATTACGA GTTGTGAGGCCGATGGTGGGACCACCCGCGTCCCCCCCCCCTGTCAGGTG CTCGAGAGCCGAGATGCAGACATCGAAGGCGCATGGGCGCGTTTCGTCGG CGCGGCCACCGAGTATGGAAAAAGTCTCAAGCAGCAAAGTGAGGCACGAC GGACACACCCACACCTGGTCTCCCACGACTACGGAATCCGTTCTACAGAA CTTCACGACGAAAAGCTCCTGCTGCTGATGGAGAGGTACAGTACGATGAT CTCCTCGCAGGCAAGATACATGCGCTCTGTTTGTGTCCACGGCGACAAGT TTGTGTTCGATCGTGTGAGCGCTGGCGAAGCGGTGAAGGGAGAAAGACAT AGGAGATGGTCGCCTGCCTGCCCTGCGTGCCGCGCGCCTTGATCTCGAAC GGGCAGATAGGATGACCACAAGCTTCGCTCTGTCTACCACTCTCGTGTCC TCGCGTGGAACAATTATCGGTACGCTTTTGCTAGGCATCAAGGCGTAAAA GCCGTGCAGTGGCGGCAAAAAAGGGAGGGAAGTTCTGAACGCCGTCTTCC TCGTCAGGCCAAAGCATGAGCCGTTGACTGCAGCTTCTGGAAGCAAGCTT GAGATAAGAGTGTAAGCAAGAGCCGATTTCTGCACAGACTCTCGCCTTTC CCCCTCGTGGGCTACCTGCCGTCTTTGCTGGTCCCTTGCTCGCTGCCAGG TACGCTGTTCCAGCGCGCGCTCGGACGCTCCCGAGTGCCTTTCTGCGCGT TGCCTTGCCCATGCACCTCAGACTCCGCGGCGGCTCGCTCCGCCCTCCAG CACAGAATGGCAACCAGAGGAACAAGCGAAAGCGAATCTGCGATATAACT CCATCACCTACGGGCGGACAGTCCCCGGCCGAGCTCGAAACTGGTGGCGC GTTTGCATCGCGCGTCGAAAGTAGCATTAGCAGCTGGCGTGCTTCTCCCT CTTCTACAGAAAGTAGCCCCCTTTCTGTACCATCAGCAACGGTGACAAAA TCGGCATCGGCATCGGCATCCGCATCGGCACCGACGTATCGCACTGGTGT TGCTCCTGCCGGGTATCCCAATAAATCCTCAAGCAACGGAGGTAGGAGGT CCAAAGATTGTGAGAGCCGTTCCGAGAAGATGCAGACTACGACTGGCAAC GACAACAGCTTTGATTTTGGCTGTGGCGTGGGCGGTGGCCGTGACGATAG CCGTGGCGGTTGCAACCGCGCTGTCGCCGACACATCAGACGGCGGAGATG CATGGAGCAGCGTAGCGAGCGGCAGCGGATATCCGGCAAGGTATTTCCCT GATTCAAAGCGGGTGGGCGACGGCGGTGGGCCCGCCACTGGGTGGGAGAA CGCATGGGACACCGAGCGAGCAAGCCGTGGGTTAACCGGAGATGCTGGGT CCCGATTCCCCGGGTCGACTGTGCGACGGGACCTTCCTTCCGGCCTGAGG GAAAGCGTCGAGAGGCTGTGCGCGGCGGCTTTTTTGAGGGGGCACGTTCC ACGAGGGCTGATGCCAGAGGGCACGACGCCGGGAGAAGCATACCAAAGGT AGGAGGTATGTTAGTCGACAAATCCAATGCCATGGGGACAGGGAGGGCTT CGGGTGTGGGAGCGAGGTTGGCATGGGGAGTCAAATCGCTCAATCTCCAT CCCGCGCTCTGGAGGGCGATTCCCCTCTCAATCACCTCTCTTGTGGCCAT AGACTAGTCTGTTCCCCACGGACGTGAGTTGTCCCTCGCTTGTGTTAGGT ATCTCGAGCTACCCCCGTCTCTGGCGAAAATTCGCCACGAGCAGCTCTGC ACCGAGGCATCGAAACCCGTTGCCTCAGCTCTGCGTGGGCGCGGCTACAT CACCGTCGAGCAGCTCCTCCCCCTGTCGAAGCTGGAATGCCTGGTCGGCC AGGCAGGCGCGGGATCCGGCGAAACCCTCGCAGCCGTTTCCCTTGCGCGC GAGTTGAGACCAAAGCAAGACGCGAGTGGCGCCGGCGGCGCTGGCGGCGG CAGCAGCAGCAGCACCGGCGGTGGTCACGGCGTTTTCTCGCCCCTGCCGT CCTTCTCTCGCCGCGGTCTCTTCGCAGGGTCGCGAAGGGCATCAAGCTCG ACGGAGGGAAGTGGGCGGAGTGGCTTAGGTGGCGCCGGTTTTGGCGAGGG GCGCCGCAAGGTCGAGAGTAGAGGCGCGAGCAGAAGCATGATCAACATAA GTTGTGGATACCCTGGAGGCGACCGGTCCTGCGTGACAAAAAAGAAAAAG AAGGCGCTCCGGATAAGTCTCAGTGGCTTAGAGTTTGAAGGAGACGCCCG GGGGGCGGAGAAGAGAAGCCAATGGGAACCTAGCAAGTACACTTCGCGGC CGGAGGAGTGGGTTAGGCCCCCCCCGAGCGTGATAAAGCAACGATGGGAC GACAGCACGAAGGTGAGAAATTGCGCATGCAGGGATCTGCACGTCGGGTG AAGAAAGCCACATACATGTGACGAGACAAGTGCGCTGTGCATGGTGGTTT GCGCACACTTTGCTGGCTCGTCACACCTCGTCCTCCCAAAGCTCACCTCG CCGGCACTGAGAAAAGGCCTGCCCCTCACAAAAAGCTTTTGTTCTCGAAC GAGATGCACAGATGTGTCCCGGATTCTCCCTTGACAATCGTGCACGACAT TCCTCCGAAAATATTGCGATTGATCTGATTTTAGACGCAAATACCAGCCC ACCCATCGTGTCCTGATCTTCGCCAAGACGTTAACCTTTTGTTCCAACTT ACGTGCTGTACACGCCGCAACGCCCGCCATCCCCGAGGTAGAGTTTTGTC CCTATCAAGAACTACTCGTTCGACGGGCTCTACCGAAGACACCACCCACT CGATCTGCCCGACGGCAACGACGAGGAGGGCGGCAGCCACCATCGCCAGA TGGGCTACGACCGAAACCCCGCCGACGTAGACCATGAAGGCAATGTGCGG CTCGCTGAAGGCGAACGGCACAGCACCGTGGGGCGACGAGATTGCTCGAG CAGGGTCGATGGCACTCCCCCTGCTTCACTGACGAGGACCAAAATCCTCC CTGGGCCGGCCGGCGGTGGCGACTTGGCCGCGAGACGGATGAAAAATGTC TTGCGGGAGGAATACGGCACGTTTTTCGACGGGATGACGCAAAGCGCTCG GGATTTGCACCAGGTACGTAAGGCGAATAGCCAGAAGCACAACTGCTCGC CGAGCAACAAACTTTTCCTCCGTTTCTGAAAGCTTACTGTAAGCCCGTCG AGCATCCCTTGCGAGCCTGTATCACACGGGCAAGGGGACTCAACTCCGGT ATCGCTCGGGCGGCCTGGGGCTTAGGACGAGGCAACCTCGTCTCCAACGA AAAAAACGAGGGGATCTATCCTTGCGTATTGTCGTTTCCTCACCAAAAAC GCTGCTCCAGGGCAATCACCCCTCACCTCGCGCTCCGTACGTTGCCATGT GTGCCGCGGCTGGCTCATTCAGCACATGATCAAGGACTCAACCTCATGGG GGAGTGTAGACGATCCTATCGGCACCCTATTGCGCCGGGCCGCTTTCTTT ATTGTCGAACACCCGTCCCCCGCCACCAGGGCCGAGCTTGCGGCAGCGAG GGCGAAAGACCTCGCGGCAAAGGTGAGCCAGAGAATCGATGTATACGAAG GGAAGGTAGTGTTACATGGCTAACGAAAGATGGTGCGTCTCGCCCTCAAC TGCACGGGAAATGCCGGTCGTGACAAAAGTATGATGTCTCAGGAAGTGGC CGGCAGCAGAGATATATTTTGTACCTGCTTCATTTTTCGATGCTGCCTGT CCATTCATTTTCTGACTCTCTCCTTGCCTTCAGGGGTTCGGAGGCAAGAC CAGCCTGGCAAGACCGTCAGCTCTTGCTGGAAAGTTTAAGCCTACTGGGC TCGAGCTAGAGCTGGCGCAGGCAGCACTCGCGGGAGAGCAGGTGTGCTAG CGTGATGGTGGTACTGCTCGCTCTCGGAAGAAAAAATCGAAGCAGATGGT TGAGCACGGCTTTGGTGGCGATGCAAATGTGCCTTTTTCCACTCTGCTCA TTTCGCAATCTCCACTGTTTTGGTCATCTTTGCTCGTGATCCCTTCGACC CATAAGCGTTTTTTGATGCACAAACATGCGAAATCGCTGACGCCGTCCGC GGTCTGCTTTGACGTCCGCAAGGTTCCGACAGGACCAGCGGCGTTTCGTG AGTTCATCCGACAGCTCGACGCGACTCGCGCCGGCCAACATCCGGCAGCC TCGTCCCGCAACACCCGAAAGCCACTTCGACCGGCCGGGCGTTCGGGGGG CCCCGTGCGGATCCCTGCCGAACGCTGCTAGAGCGTCGGCTCGAGGCCGC CGCAACGCTCGCTGACCCGTTCAAGCTTCGCCTGGAGGCTGATGGCATTT CCAGTGTGAAAGTGCTCGCGAGGGCGCCGGTACGAGCGTGGGGGTTGCCG CTTAGCCTCGTCGAGGAAGTAGAGAGGATGCTCGGGCTTTTGGCAGCAAA AACTTGTGCGTCAGACCACCTCCGTGCCCACCGTGGTCGGAGAAAATTCA ATGATGACCCAGCCGACGTCAAGCAATCGGCGGCGAGCTTGGGAAGGGTG CATCATTCCACCGACGGAATGCCTTACGGCGGCGAAAGGCTCAGGTGGCG GAACAAATCGAGCGGACGGGCGCGCAAACGTCAACTGTTCGAGTTTGATC CCAGATTTCAGAGGTCACCGATTGATCCTTTCGGACGCCCTCCGCGTCTC GAAAGCATCCAACCCTGCCCCGTCCCCCGCCCAGACAACAGGGTCGACGT CTCTTGCGATCGCGGACCGGAAGATGAAGCCGACGATTTACCCGCCGGAG TGTGGGACCTCCCAGCCGCCTCTGAGGTCGCCCCAGGAAGTGACGTAACC GTCCACCAAGAAGTAGAATCGCCGGCAGAGGAGGGCACAGCGGCCCAAAC TACTTCGCTGCCTTCGTGTTCCATGCGGGAGAGCATGCCTGAGGGTACCG GGAGAAGAGAATTGGCTGAGCAAGAGCTAATCAATTCTCCACGGGAGCCC GTCGTTGTGAATCCCTGCCGAGATCCATCGCGGCAGGCGGCAACAACAAC CTCGGCCGACAGGGATCCACCGTCTGCCCACGCGACATCACCACCACGAC ACACGTGCCGAGCACACCCACGCTGCAAAGCAGCGTTCGCCAGAGCCTCG ACGCTCGGGACGCACGAGAGATCCCACGCCACGGCCCCCGTCTACCACCG CCTCCGCCGTACCCCTCAGCTCTTCCGCGACCCGCCTCAGGCCTCTTCCG AAGGCGCCGGGGCCCCCGCCGAGAAATTCCGGCTACGAACGACGCTGCCG GCCAGCGTCCGGCGCGAGCTGCAACAGCTGCACGACGAGAACGTGCGGCG GAGGCGCCAAAGTCTTTTGGCCGGACCGGGCTTGTCGGGGACGGTGACGA CGTGGGCCGGGGTGGTTTCGCCCGGCAGG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig13:1308289..1320217+

>mRNA_P-fluviatile_contig13.1752.1 ID=mRNA_P-fluviatile_contig13.1752.1|Name=mRNA_P-fluviatile_contig13.1752.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=8256bp|location=Sequence derived from alignment at P-fluviatile_contig13:1308289..1320217+ (Porterinema fluviatile SAG_2381)
ATGAAACCTGACTGCCTCGCGATGGTTCAGCTAGGGAAAGGCATGAAATT
ACAGATGAAACCTGACTGCCTCGCGATGGTTCAGCTAGGGAAAGGCATGA
AATTACAGAGGCGGGAAATTCTTGACCGGTTACGCATAGAGGAAGCGCGA
CGGGAATACATCGAGTGGGAGCTCGGTGTTGCTGTCGAAAAGACGGAGTC
ACGTGTGCGTAGAATGGAAGCCGCCCGCATCATTTGGAGCAAGTGGTGCT
CTTCTAAACAAAGCAAGCCGAGAGGCGGGAAATTCTTGACCGGTTACGCA
TAGAGGAAGCGCGACGGGAATACATCGAGTGGGAGCTCGGTGTTGCTGTC
GAAAAGACGGAGTCACGTGTGCGTAGAATGGAAGCCGCCCGCATCATTTG
GAGCAAGTGGTGCTCTTCTAAACAAAGCAAGCCGAGCCCACTGAACGCGG
TTCTGGACAGCCATTCCGGCCGGCGCTTGTGGAGAGAGTTTATTCAAAAT
GAGCTCGCTAAGGACAACAACGCACCTTCCCGTCACCAGCCATCTCGCTG
GACTGCGAGGCGCGGGGGTGCTAAAGATAGCGACGAATTTTCCAAGGATC
ACCAAACACAGTCTTGTAACGGGTCGTTCGAAGTGTCGATCCCACTGAAC
GCGGTTCTGGACAGCCATTCCGGCCGGCGCTTGTGGAGAGAGTTTATTCA
AAATGAGCTCGCTAAGGACAACAACGCACCTTCCCGTCACCAGCCATCTC
GCTGGACTGCGAGGCGCGGGGGTGCTAAAGATAGCGACGAATTTTCCAAG
GATCACCAAACACAGTCTTGTAACGGGTCGTTCGAAGTGTCGATCCTTCC
AGAAGTCGCGACCAGCGGGTTGGAGATGGTTGCATGTAATCAGAGGGAGT
GGAACGCGACGGGCGATTCACCTGTCATTGTCGCTAAGCTCCACGTGGCG
CTCGAGAGAGTATCATGGCAGGAAGATGCAAAGAAGAGTGGCGGGATGGG
TGTCAGCGAGTTTTGCAGGGAATGGCCGCGAGACTGCATATTACCATCGT
TCATCGACCGAACACTTCTGGAGCCTGCCTGGTCGGCTGGGGAACAGCCT
TCCAGAAGTCGCGACCAGCGGGTTGGAGATGGTTGCATGTAATCAGAGGG
AGTGGAACGCGACGGGCGATTCACCTGTCATTGTCGCTAAGCTCCACGTG
GCGCTCGAGAGAGTATCATGGCAGGAAGATGCAAAGAAGAGTGGCGGGAT
GGGTGTCAGCGAGTTTTGCAGGGAATGGCCGCGAGACTGCATATTACCAT
CGTTCATCGACCGAACACTTCTGGAGCCTGCCTGGTCGGCTGGGGAACAG
GCTCCACATGATCAAGGCGCCAACGTCGACGCACTTGTTCCTGCGAGGCA
AGAAGTGCGGCGAGAAGTAGAGCGTTTGTATTTCGCGGAGTTCTTGGGCA
GCAGCGAGGGACAGACGTTCGTGGTCCATGCAGTCCAGGACGGGACCCTC
GAGCCAACAGAGGCTCCACATGATCAAGGCGCCAACGTCGACGCACTTGT
TCCTGCGAGGCAAGAAGTGCGGCGAGAAGTAGAGCGTTTGTATTTCGCGG
AGTTCTTGGGCAGCAGCGAGGGACAGACGTTCGTGGTCCATGCAGTCCAG
GACGGGACCCTCGAGCCAACAGAGGTCCAACCACTGGTGCAACAAATGAC
CGAGGGGGCACAGTTCGACGAGGATGCTCAAGGCTTCCGACGAATTATTG
CACATGGCGACCAATGGATGCTCTCCCGGTTGGTGCATGATGGAGTGGAG
CAGCGGGTTCGGGTGGAGGTCCAACCACTGGTGCAACAAATGACCGAGGG
GGCACAGTTCGACGAGGATGCTCAAGGCTTCCGACGAATTATTGCACATG
GCGACCAATGGATGCTCTCCCGGTTGGTGCATGATGGAGTGGAGCAGCGG
GTTCGGGTGGAGGTAGTGGAACCTTTGCTCCGAACTCTACTGGCTGAGAC
CACCCGCCAAATCACCGAACAGCGCGGCGAGCTTGCAGCGATCGTGCAGT
ACGTCTACTCTCTCGCCGCCTCGCGGTTGCAGCCATTTGTGCGCGGTACC
CTGGCGCGGCGAAAGCTAGCGGACGCAAGCTGGGAGTTGTTTCACAACGT
AGTGGAACCTTTGCTCCGAACTCTACTGGCTGAGACCACCCGCCAAATCA
CCGAACAGCGCGGCGAGCTTGCAGCGATCGTGCAGTACGTCTACTCTCTC
GCCGCCTCGCGGTTGCAGCCATTTGTGCGCGGTACCCTGGCGCGGCGAAA
GCTAGCGGACGCAAGCTGGGAGTTGTTTCACAACGCGTTCCTTTGCGCCG
CGGTGGAAATCCAGCGAATGTTTCGCGGGTACACTGCGCGGAGACGAGCT
CGTGCTGCTCTTGTGCTCTTGGCATCAACCAGGCGAGGAGCACTTGCACT
GGGCGTTCCTTTGCGCCGCGGTGGAAATCCAGCGAATGTTTCGCGGGTAC
ACTGCGCGGAGACGAGCTCGTGCTGCTCTTGTGCTCTTGGCATCAACCAG
GCGAGGAGCACTTGCACTGGCCCGTGTCCGGGGTGTTCTGCTGCGACAGC
GAGTCGCCAGAAAGTGGGATATTTTGCTCGATCGACAGCCCGTGTCCGGG
GTGTTCTGCTGCGACAGCGAGTCGCCAGAAAGTGGGATATTTTGCTCGAT
CGACAGGCTGTGGAGATCCAACGCGTTTTTCGGGGGCACCGGTCACGAGG
CCGGGTGCGATCGGCCTTGAAGGACCGAGTCCGGGCGCAGAGTGCCGAGC
TGCAGGGTTGGGCATCCTTGGTCCTGCAAAAGCTGTGGAGATCCAACGCG
TTTTTCGGGGGCACCGGTCACGAGGCCGGGTGCGATCGGCCTTGAAGGAC
CGAGTCCGGGCGCAGAGTGCCGAGCTGCAGGGTTGGGCATCCTTGGTCCT
GCAAAAACAAGCACGCGTTTGGCTGGCACGGCGAGCTGTCGACCTCAAGA
GGGTGGAGGTGGGCCTGACCTCGAGGGTTTCAGAGCTTGCCGAAAGGCTG
GCGTCCTCCGATGACAGTCGCAGTGTCTCGGCTGTGTTTGGTCAGACAAG
CACGCGTTTGGCTGGCACGGCGAGCTGTCGACCTCAAGAGGGTGGAGGTG
GGCCTGACCTCGAGGGTTTCAGAGCTTGCCGAAAGGCTGGCGTCCTCCGA
TGACAGTCGCAGTGTCTCGGCTGTGTTTGGTCAGATAGACAAGGACTACC
GAAAGTACGAGAAAATTATCGCCGAGATGAAAGCCAGGGAAGAAAAAATG
GCAATCACGTTTGTCGAAAAGATAGACAAGGACTACCGAAAGTACGAGAA
AATTATCGCCGAGATGAAAGCCAGGGAAGAAAAAATGGCAATCACGTTTG
TCGAAAAGGTGCTCGAGAGCCGAGATGCAGACATCGAAGGCGCATGGGCG
CGTTTCGTCGGCGCGGCCACCGAGTATGGAAAAAGTCTCAAGCAGCAAAG
TGAGGCACGACGGACACACCCACACCTGGTCTCCCACGACTACGGAATCC
GTTCTACAGAACTTCACGACGAAAAGCTCCTGCTGCTGATGGAGAGGTGC
TCGAGAGCCGAGATGCAGACATCGAAGGCGCATGGGCGCGTTTCGTCGGC
GCGGCCACCGAGTATGGAAAAAGTCTCAAGCAGCAAAGTGAGGCACGACG
GACACACCCACACCTGGTCTCCCACGACTACGGAATCCGTTCTACAGAAC
TTCACGACGAAAAGCTCCTGCTGCTGATGGAGAGGTACGCTGTTCCAGCG
CGCGCTCGGACGCTCCCGAGTGCCTTTCTGCGCGTTGCCTTGCCCATGCA
CCTCAGACTCCGCGGCGGCTCGCTCCGCCCTCCAGCACAGAATGGCAACC
AGAGGAACAAGCGAAAGCGAATCTGCGATATAACTCCATCACCTACGGGC
GGACAGTCCCCGGCCGAGCTCGAAACTGGTGGCGCGTTTGCATCGCGCGT
CGAAAGTACGCTGTTCCAGCGCGCGCTCGGACGCTCCCGAGTGCCTTTCT
GCGCGTTGCCTTGCCCATGCACCTCAGACTCCGCGGCGGCTCGCTCCGCC
CTCCAGCACAGAATGGCAACCAGAGGAACAAGCGAAAGCGAATCTGCGAT
ATAACTCCATCACCTACGGGCGGACAGTCCCCGGCCGAGCTCGAAACTGG
TGGCGCGTTTGCATCGCGCGTCGAAACAACGGTGACAAAATCGGCATCGG
CATCGGCATCCGCATCGGCACCGACGTATCGCACTGGTGTTGCTCCTGCC
GGGTATCCCAATAAATCCTCAAGCAACGGAGGTAGGAGGTCCAAAGATTG
TGAGAGCCGTTCCGAGAAGATGCAGACTACGACTGGCAACGACAACAGCT
TTGATTTTGGCTGTGGCGTGGGCGGTGGCCGTGACGATAGCCGTGGCGGT
TGCAACCGCGCTGTCGCCGACACATCAGACGGCGGAGATGCATGGAGCAG
CGTAGCGAGCGGCAGCGGATATCCGGCAAGGTATTTCCCTGATTCAAAGC
GGGTGGGCGACGGCGGTGGGCCCGCCACTGGGTGGGAGAACGCATGGGAC
ACCGAGCGAGCAAGCCGTGGGTTAACCGGAGATGCTGGGTCCCGATTCCC
CGGGTCGACTGTGCGACGGGACCTTCCTTCCGGCCTGAGGGAAAGCGTCG
AGAGGCTGTGCGCGGCGGCTTTTTTGAGGGGGCACGTTCCACGAGGGCTG
ATGCCAGAGGGCACGACGCCGGGAGAAGCATACCAAAGCAACGGTGACAA
AATCGGCATCGGCATCGGCATCCGCATCGGCACCGACGTATCGCACTGGT
GTTGCTCCTGCCGGGTATCCCAATAAATCCTCAAGCAACGGAGGTAGGAG
GTCCAAAGATTGTGAGAGCCGTTCCGAGAAGATGCAGACTACGACTGGCA
ACGACAACAGCTTTGATTTTGGCTGTGGCGTGGGCGGTGGCCGTGACGAT
AGCCGTGGCGGTTGCAACCGCGCTGTCGCCGACACATCAGACGGCGGAGA
TGCATGGAGCAGCGTAGCGAGCGGCAGCGGATATCCGGCAAGGTATTTCC
CTGATTCAAAGCGGGTGGGCGACGGCGGTGGGCCCGCCACTGGGTGGGAG
AACGCATGGGACACCGAGCGAGCAAGCCGTGGGTTAACCGGAGATGCTGG
GTCCCGATTCCCCGGGTCGACTGTGCGACGGGACCTTCCTTCCGGCCTGA
GGGAAAGCGTCGAGAGGCTGTGCGCGGCGGCTTTTTTGAGGGGGCACGTT
CCACGAGGGCTGATGCCAGAGGGCACGACGCCGGGAGAAGCATACCAAAG
GTATCTCGAGCTACCCCCGTCTCTGGCGAAAATTCGCCACGAGCAGCTCT
GCACCGAGGCATCGAAACCCGTTGCCTCAGCTCTGCGTGGGCGCGGCTAC
ATCACCGTCGAGCAGCTCCTCCCCCTGTCGAAGCTGGAATGCCTGGTCGG
CCAGGCAGGCGCGGGATCCGGCGAAACCCTCGCAGCCGTTTCCCTTGCGC
GCGAGTTGAGACCAAAGCAAGACGCGAGTGGCGCCGGCGGCGCTGGCGGC
GGCAGCAGCAGCAGCACCGGCGGTGGTCACGGCGTTTTCTCGCCCCTGCC
GTCCTTCTCTCGCCGCGGTCTCTTCGCAGGGTCGCGAAGGGCATCAAGCT
CGACGGAGGGAAGTGGGCGGAGTGGCTTAGGTGGCGCCGGTTTTGGCGAG
GGGCGCCGCAAGGTCGAGAGTAGAGGCGCGAGCAGAAGCATGATCAACAT
AAGTTGTGGATACCCTGGAGGCGACCGGTCCTGCGTGACAAAAAAGAAAA
AGAAGGCGCTCCGGATAAGTCTCAGTGGCTTAGAGTTTGAAGGAGACGCC
CGGGGGGCGGAGAAGAGAAGCCAATGGGAACCTAGCAAGTACACTTCGCG
GCCGGAGGAGTGGGTTAGGCCCCCCCCGAGCGTGATAAAGCAACGATGGG
ACGACAGCACGAAGGTATCTCGAGCTACCCCCGTCTCTGGCGAAAATTCG
CCACGAGCAGCTCTGCACCGAGGCATCGAAACCCGTTGCCTCAGCTCTGC
GTGGGCGCGGCTACATCACCGTCGAGCAGCTCCTCCCCCTGTCGAAGCTG
GAATGCCTGGTCGGCCAGGCAGGCGCGGGATCCGGCGAAACCCTCGCAGC
CGTTTCCCTTGCGCGCGAGTTGAGACCAAAGCAAGACGCGAGTGGCGCCG
GCGGCGCTGGCGGCGGCAGCAGCAGCAGCACCGGCGGTGGTCACGGCGTT
TTCTCGCCCCTGCCGTCCTTCTCTCGCCGCGGTCTCTTCGCAGGGTCGCG
AAGGGCATCAAGCTCGACGGAGGGAAGTGGGCGGAGTGGCTTAGGTGGCG
CCGGTTTTGGCGAGGGGCGCCGCAAGGTCGAGAGTAGAGGCGCGAGCAGA
AGCATGATCAACATAAGTTGTGGATACCCTGGAGGCGACCGGTCCTGCGT
GACAAAAAAGAAAAAGAAGGCGCTCCGGATAAGTCTCAGTGGCTTAGAGT
TTGAAGGAGACGCCCGGGGGGCGGAGAAGAGAAGCCAATGGGAACCTAGC
AAGTACACTTCGCGGCCGGAGGAGTGGGTTAGGCCCCCCCCGAGCGTGAT
AAAGCAACGATGGGACGACAGCACGAAGAGTTTTGTCCCTATCAAGAACT
ACTCGTTCGACGGGCTCTACCGAAGACACCACCCACTCGATCTGCCCGAC
GGCAACGACGAGGAGGGCGGCAGCCACCATCGCCAGATGGGCTACGACCG
AAACCCCGCCGACGTAGACCATGAAGGCAATGTGCGGCTCGCTGAAGGCG
AACGGCACAGCACCGTGGGGCGACGAGATTGCTCGAGCAGGGTCGATGGC
ACTCCCCCTGCTTCACTGACGAGGACCAAAATCCTCCCTGGGCCGGCCGG
CGGTGGCGACTTGGCCGCGAGACGGATGAAAAATGTCTTGCGGGAGGAAT
ACGGCACGTTTTTCGACGGGATGACGCAAAGCGCTCGGGATTTGCACCAG
AGTTTTGTCCCTATCAAGAACTACTCGTTCGACGGGCTCTACCGAAGACA
CCACCCACTCGATCTGCCCGACGGCAACGACGAGGAGGGCGGCAGCCACC
ATCGCCAGATGGGCTACGACCGAAACCCCGCCGACGTAGACCATGAAGGC
AATGTGCGGCTCGCTGAAGGCGAACGGCACAGCACCGTGGGGCGACGAGA
TTGCTCGAGCAGGGTCGATGGCACTCCCCCTGCTTCACTGACGAGGACCA
AAATCCTCCCTGGGCCGGCCGGCGGTGGCGACTTGGCCGCGAGACGGATG
AAAAATGTCTTGCGGGAGGAATACGGCACGTTTTTCGACGGGATGACGCA
AAGCGCTCGGGATTTGCACCAGCACATGATCAAGGACTCAACCTCATGGG
GGAGTGTAGACGATCCTATCGGCACCCTATTGCGCCGGGCCGCTTTCTTT
ATTGTCGAACACCCGTCCCCCGCCACCAGGGCCGAGCTTGCGGCAGCGAG
GGCGAAAGACCTCGCGGCAAAGCACATGATCAAGGACTCAACCTCATGGG
GGAGTGTAGACGATCCTATCGGCACCCTATTGCGCCGGGCCGCTTTCTTT
ATTGTCGAACACCCGTCCCCCGCCACCAGGGCCGAGCTTGCGGCAGCGAG
GGCGAAAGACCTCGCGGCAAAGGGGTTCGGAGGCAAGACCAGCCTGGCAA
GACCGTCAGCTCTTGCTGGAAAGTTTAAGCCTACTGGGCTCGAGCTAGAG
CTGGCGCAGGCAGCACTCGCGGGAGAGCAGGGGTTCGGAGGCAAGACCAG
CCTGGCAAGACCGTCAGCTCTTGCTGGAAAGTTTAAGCCTACTGGGCTCG
AGCTAGAGCTGGCGCAGGCAGCACTCGCGGGAGAGCAGGTTCCGACAGGA
CCAGCGGCGTTTCGTGAGTTCATCCGACAGCTCGACGCGACTCGCGCCGG
CCAACATCCGGCAGCCTCGTCCCGCAACACCCGAAAGCCACTTCGACCGG
CCGGGCGTTCGGGGGGCCCCGTGCGGATCCCTGCCGAACGCTGCTAGGTT
CCGACAGGACCAGCGGCGTTTCGTGAGTTCATCCGACAGCTCGACGCGAC
TCGCGCCGGCCAACATCCGGCAGCCTCGTCCCGCAACACCCGAAAGCCAC
TTCGACCGGCCGGGCGTTCGGGGGGCCCCGTGCGGATCCCTGCCGAACGC
TGCTAG
back to top