prot_P-fluviatile_contig13.1693.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig13.1693.1
Unique Nameprot_P-fluviatile_contig13.1693.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length89
Homology
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BLAST of mRNA_P-fluviatile_contig13.1693.1 vs. uniprot
Match: D7FKI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKI6_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 2.440e-30
Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 0 
Query:   11 LVVLTAMVLQM--AAAADFELSNAPGTIRREDRDPFKEGYFHMVIACFALMFFFIGCMFTVRITMGKRRNNDSRSFFLVA 88
            L+VL A VL M  AAA DFE+S   G+IR +DRDPFKEGYF+M+I+CFALMFFFIGCMF+VRI +GK+R NDS SFFLVA
Sbjct:    8 LLVLLAAVLHMMGAAAEDFEVSTGVGSIRAQDRDPFKEGYFNMIISCFALMFFFIGCMFSVRICLGKKRGNDSHSFFLVA 87
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1693.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKI6_ECTSI2.440e-3071.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..47
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..88
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..69
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..24
score: 0.874
NoneNo IPR availableTMHMMTMhelixcoord: 7..24
NoneNo IPR availableTMHMMTMhelixcoord: 47..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:780969..781235 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1693.1mRNA_P-fluviatile_contig13.1693.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig13 780969..781235 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig13.1693.1 ID=prot_P-fluviatile_contig13.1693.1|Name=mRNA_P-fluviatile_contig13.1693.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=89bp
MMASMSHPLLLVVLTAMVLQMAAAADFELSNAPGTIRREDRDPFKEGYFH
MVIACFALMFFFIGCMFTVRITMGKRRNNDSRSFFLVA*
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