prot_P-fluviatile_contig13.1669.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig13.1669.1
Unique Name	prot_P-fluviatile_contig13.1669.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	424

Homology

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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: D7FKE7_ECTSI (RRM Nup35-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE7_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 3.690e-55
Identity = 152/321 (47.35%), Postives = 167/321 (52.02%), Query Frame = 0

Query:   40 STQGHHEAQQEERFVEGDLFGSTKRPSFRAADPPAGLPPRATYYDGAGAGDVGG--NSFRNGIRSGVAGSAGGMGGYAQTPIA-QPSPFARAPTPTGAFFSAATAXXXXXXXXXXAAGGAAPGSAYRGARYSQVSPATRVRPTSDQRQSLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPTRSLADDPDIRDEGADAVAAAEGLRYRRGGGAGGXXXXXXXXXXXXXXXXFHAEQPDTQRATWVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGVQRVPDDE 357
            S +   +   E + VEGDLFG+ KR SFR+ DPP G PPR  ++D    G      N+FRNG            GG  QTP A QPSPFAR P      FSAA              GG           YS   P    +    Q                               XXXXXX+PTRSLADDPD   +G                    XXXX    XXXX    F+A  PDTQRATWV+VWGVPPG +N+VL RFLQFG V EQRGQPGSNWLY KYATRLQAEKALAAGHGSRLTDTVMLGVQRVPDDE
Sbjct:   22 SRERGRDGPPEGQVVEGDLFGNPKRQSFRSTDPPTGAPPRGAFHDATAGGXXXXXXNAFRNGGXX--------XGGCGQTPAAAQPSPFARGPMNDS--FSAA-------------GGGXXXXXXXXXXXYSN--PGQTAQQQQQQHGFGARVGFSSEVALVPVEASGNSRGRNVMDXXXXXXIPTRSLADDPDDVRDGGVLFGXXXXXXXXXXXXXXXXXXXVDRMXXXXGIGSFNAA-PDTQRATWVVVWGVPPGKSNQVLIRFLQFGDVVEQRGQPGSNWLYFKYATRLQAEKALAAGHGSRLTDTVMLGVQRVPDDE 316

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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: A0A6H5KSX2_9PHAE (RRM Nup35-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSX2_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 1.260e-41
Identity = 156/309 (50.49%), Postives = 171/309 (55.34%), Query Frame = 0

Query:   50 EERFVEGDLFGSTKRPSFRAADPPAGLPPRATYYDGAGAGDVGGNSFRNGIRSGVAGSAGGMGGYAQTPI-AQPSPFARAPTPTGAFFSAATAXXXXXXXXXXAAGGAAPGSAYRGARYSQVSPATRVRPTSDQRQSLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPTRSLADDPDIRDEGADAVAAAEGLRYRRGGGAGGXXXXXXXXXXXXXXXXFHAEQPDTQRATWVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGVQRVPDDE 357
            E + VEGDLFG+ KR +FR+ DPP G+PPR  Y D A AG        N  RS             QTP  AQPSPFAR P       S+   XXXXXXXXXX  G + PG   +  +  Q     RV  +SD                               XXXXXXX  TRSL                              XXXXXXXXXXXXX   F+A  PDTQRATWV+VWGVPPG +N+VL RFLQFG V EQRGQPGSNWLY+KYATRLQAEKALAAGHGSRLTDTVMLGVQRV DDE
Sbjct:   32 EGQVVEGDLFGNPKRQNFRSTDPPTGVPPRGAYID-ATAGGXXXXXXXNAFRSXXXXXXX----XXQTPASAQPSPFARGPMNAS---SSVAXXXXXXXXXXXXXGYSDPGQTAQ--QQQQHGFGARVGFSSD------------VAFVPVEASGNSRGQNVMDXXXXXXXXXTRSLXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXFGGFNAA-PDTQRATWVVVWGVPPGKSNQVLIRFLQFGDVVEQRGQPGSNWLYLKYATRLQAEKALAAGHGSRLTDTVMLGVQRVLDDE 311

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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: E9HKL2_DAPPU (Nucleoporin NUP35 (Fragment) n=3 Tax=Daphnia TaxID=6668 RepID=E9HKL2_DAPPU)

HSP 1 Score: 76.3 bits (186), Expect = 1.060e-12
Identity = 41/105 (39.05%), Postives = 62/105 (59.05%), Query Frame = 0

Query:  278 DTQRATWVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGVQRVPDDETWRALREGRIPPLHAAPPVLARSLP 382
            D+   TWV V+G PP +A+ VLT+   +GH+ E R     NW+++K+A+RLQA KALA  +G  LTDT+++GV    D       R+  +P + + P +   S P
Sbjct:    4 DSDAGTWVTVFGFPPTAASYVLTQTAMWGHILEHRIPSQGNWMHLKFASRLQARKALAR-NGRLLTDTLIIGVVPCTDGSIMEENRKENMPGM-STPAMRITSTP 106

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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: A0A0P5DW53_9CRUS (Nucleoporin NUP53 n=2 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5DW53_9CRUS)

HSP 1 Score: 75.9 bits (185), Expect = 1.240e-11
Identity = 41/105 (39.05%), Postives = 61/105 (58.10%), Query Frame = 0

Query:  278 DTQRATWVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGVQRVPDDETWRALREGRIPPLHAAPPVLARSLP 382
            D+   TWV V+G PP +A+ VLT+   +GH+ E R     NW+++K+A+RLQA KALA  +G  LTDT+M+GV    D       R+  +  + + P +   S P
Sbjct:  136 DSDAGTWVTVFGFPPSAASYVLTQTGMWGHIMEHRIPSQGNWMHLKFASRLQARKALAR-NGRLLTDTLMIGVVPCTDGAIMEESRKENLQAI-STPSMRVTSTP 238

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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: A0A1V9Z8L5_9STRA (RRM Nup35-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8L5_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.220e-8
Identity = 48/139 (34.53%), Postives = 69/139 (49.64%), Query Frame = 0

Query:  284 WVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGVQR--VPDDETWRALREGRIPPLHAAPPVLARSLPGRAANGDMMEIDDADLLGAPPQRPRGDKSLCGRVMALF 420
            W+ V+G        +L  F   G   + R   G NWLY++Y TRLQAEKALA   GS L+ +VM+GV+R  V + +    +++G      A  P+L+R L    ++ D ME          P+RP     LC R+M   
Sbjct:  128 WITVFGFSAVDMETILRHFQSMGDAVQYRYGRG-NWLYVRYRTRLQAEKALAES-GSTLSGSVMIGVKRCLVSEMDADTPVQQGSND-RKAPAPLLSRELQVAPSDVDFMET---------PRRP---SDLCSRLMRFL 251

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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: A0A836CNV8_9STRA (RRM Nup35-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNV8_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.320e-8
Identity = 56/172 (32.56%), Postives = 77/172 (44.77%), Query Frame = 0

Query:  282 ATWVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTD-TVMLGVQRVP----------DDETWRALRE-GRIPPLHA------------------------APPVLARSLPGRAANGDMMEIDDADLLGAPPQRPRGDK-SLCGRV 416
            A WVMV+G+P G   EV+  F  +G V E R   G NW+ ++YAT LQA KALA+G+ +R++   +M+G   +              T R  R     PP H                         APPV  R+   R A      IDD+DLL    + PR  K ++C R+
Sbjct:   86 ARWVMVYGMPAGCVAEVVDHFRVYGQVVENRVGQG-NWVLLRYATVLQARKALASGNHARISGGRIMVGTSAIDAAAAXXXXXXXXATERLARRCASPPPAHVPLGGGARLRPPRQRSPALPSAIGYAPPVRPRATVRRVA-----AIDDSDLL---QEAPRARKWNVCDRI 248

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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: A0A024U1H3_9STRA (RRM Nup35-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U1H3_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 5.870e-8
Identity = 49/153 (32.03%), Postives = 68/153 (44.44%), Query Frame = 0

Query:  273 HAEQPDTQRATWVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGVQR-----VPDDETWRALREGRIPPLHAAPPVLARSLPGRAANGDMMEIDDADLLGAPPQRPRGDKSLCGRVMALF 420
            H ++       WV V+G P      VL+ F   G+V + R   G NWLY++Y TRLQAEKAL    GS L   VM+GV+R     +  D     + +   PP    P +L+R L     + D+ME             PR    +C R +   
Sbjct:  124 HTQEWGDDELYWVTVFGFPMQDMEVVLSYFQAIGNVAQYRHGRG-NWLYLRYQTRLQAEKALIES-GSTLGGRVMIGVKRCLAWEMDADAPMVNVTDSTSPP----PSMLSRDLLVNPTDVDVMES------------PRRHDDICSRFLRFL 258

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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: A0A6G0XIB8_9STRA (RRM Nup35-type domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIB8_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.700e-7
Identity = 45/138 (32.61%), Postives = 62/138 (44.93%), Query Frame = 0

Query:  284 WVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGVQRVPDDETWRALREGRIPPLHAAP-PVLARSLPGRAANGDMMEIDDADLLGAPPQRPRGDKSLCGRVMALF 420
            W+ V+G P    + + + F   G V + R   G NWLYI+Y TRLQAEKAL    GS L+  +M+G +R    E         +   HA P P+L+R L       D+ME             PR    +C R +   
Sbjct:  152 WITVFGFPIQDMDAIFSYFQTLGDVVQYRYGRG-NWLYIRYRTRLQAEKALQES-GSTLSGRIMIGTKRCLAWEMDADAPVCNLTDTHAPPAPLLSRDLQVNPPEIDVMES------------PRRQDDMCSRFLRFL 275

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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: A0A485LFV7_9STRA (Aste57867_19034 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LFV7_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 4.800e-7
Identity = 47/138 (34.06%), Postives = 61/138 (44.20%), Query Frame = 0

Query:  284 WVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGVQRVPDDETWRALREGRIPPLHAAP-PVLARSLPGRAANGDMMEIDDADLLGAPPQRPRGDKSLCGRVMALF 420
            W+ V+G P    + V + F   G V + R   G NWLY++Y TRLQAEKAL    GS L   VM+G +R    E         I   HA P P+L+R L       D+ME             PR    +C R +   
Sbjct:  137 WITVFGFPIQEMDAVFSYFQTLGDVVQYRYGRG-NWLYVRYRTRLQAEKALHES-GSTLGGRVMIGTKRCLAWEMDADAPVINITDHHAPPAPLLSRDLQVNPPEVDIMES------------PRRQDDVCSRFLRFL 260

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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: T0PIB6_SAPDV (RRM Nup35-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PIB6_SAPDV)

HSP 1 Score: 61.2 bits (147), Expect = 5.870e-7
Identity = 45/139 (32.37%), Postives = 64/139 (46.04%), Query Frame = 0

Query:  284 WVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGVQR--VPDDETWRALREGRIPPLHAAPPVLARSLPGRAANGDMMEIDDADLLGAPPQRPRGDKSLCGRVMALF 420
            W+ V+G        +L  F   G   + R   G NWLY++Y TRLQAEKAL    G+ L  TVM+GV+R  V + +      +G       AP +L+R L     + D ME         PP+R     + C R++   
Sbjct:  128 WITVFGFSAVDMEAILKHFQSIGDAVQYRYGRG-NWLYVRYRTRLQAEKALGES-GATLGGTVMIGVKRCLVSEMDADTPAHQGSTSSTTPAP-LLSRELQVAPCDDDFME---------PPRR---QTNFCSRLLRFL 251

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17


Match Name	E-value	Identity	Description
D7FKE7_ECTSI	3.690e-55	47.35	RRM Nup35-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5KSX2_9PHAE	1.260e-41	50.49	RRM Nup35-type domain-containing protein n=1 Tax=E...	[more]
E9HKL2_DAPPU	1.060e-12	39.05	Nucleoporin NUP35 (Fragment) n=3 Tax=Daphnia TaxID...	[more]
A0A0P5DW53_9CRUS	1.240e-11	39.05	Nucleoporin NUP53 n=2 Tax=Daphnia magna TaxID=3552...	[more]
A0A1V9Z8L5_9STRA	1.220e-8	34.53	RRM Nup35-type domain-containing protein n=1 Tax=A...	[more]
A0A836CNV8_9STRA	1.320e-8	32.56	RRM Nup35-type domain-containing protein n=1 Tax=T...	[more]
A0A024U1H3_9STRA	5.870e-8	32.03	RRM Nup35-type domain-containing protein n=1 Tax=A...	[more]
A0A6G0XIB8_9STRA	1.700e-7	32.61	RRM Nup35-type domain-containing protein n=2 Tax=A...	[more]
A0A485LFV7_9STRA	4.800e-7	34.06	Aste57867_19034 protein n=1 Tax=Aphanomyces stella...	[more]
T0PIB6_SAPDV	5.870e-7	32.37	RRM Nup35-type domain-containing protein n=2 Tax=S...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 278..352 e-value: 2.6E-17 score: 64.6
None	No IPR available	PFAM	PF14605	Nup35_RRM_2	coord: 283..334 e-value: 9.5E-12 score: 44.7
None	No IPR available	PANTHER	PTHR21527:SF6	NUCLEOPORIN NUP35	coord: 277..353
None	No IPR available	PANTHER	PTHR21527	FAMILY NOT NAMED	coord: 277..353
IPR007846	RNA-recognition motif (RRM) Nup35-type domain	PROSITE	PS51472	RRM_NUP35	coord: 279..360 score: 17.876
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 282..356

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig13	contig	P-fluviatile_contig13:564292..567922 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig13.1669.1	mRNA_P-fluviatile_contig13.1669.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig13 562673..568609 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig13.1669.1 ID=prot_P-fluviatile_contig13.1669.1|Name=mRNA_P-fluviatile_contig13.1669.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=424bp
MPFSSANAHFALCNPVPIPCHFMSSRPLPSHVALSRSILSTQGHHEAQQE
ERFVEGDLFGSTKRPSFRAADPPAGLPPRATYYDGAGAGDVGGNSFRNGI
RSGVAGSAGGMGGYAQTPIAQPSPFARAPTPTGAFFSAATATPTNAFFSA
AAAGGAAPGSAYRGARYSQVSPATRVRPTSDQRQSLGGGGGGEAALVPVE
ANGAGRGQNVTDDDDDDDDMPTRSLADDPDIRDEGADAVAAAEGLRYRRG
GGAGGGDARGGLRVGGLTVGGFHAEQPDTQRATWVMVWGVPPGSANEVLT
RFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGV
QRVPDDETWRALREGRIPPLHAAPPVLARSLPGRAANGDMMEIDDADLLG
APPQRPRGDKSLCGRVMALFGFY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR007846	RRM_NUP35_dom
IPR035979	RBD_domain_sf