mRNA_P-fluviatile_contig13.1669.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1669.1
Unique NamemRNA_P-fluviatile_contig13.1669.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: D7FKE7_ECTSI (RRM Nup35-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE7_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 9.820e-52
Identity = 152/321 (47.35%), Postives = 167/321 (52.02%), Query Frame = 3 
Query: 1092 STQGHHEAQQEERFVEGDLFGSTKRPSFRAADPPAGLPPRATYYDGAGAGDVGG--NSFRNGIRSGVAGSAGGMGGYAQTPIA-QPSPFARAPTPTGAFFSAATAXXXXXXXXXXAAGGAAPGSAYRGARYSQVSPATRVRPTSDQRQSLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPTRSLADDPDIRDEGADAVAAAEGLRYRRGGGAGGXXXXXXXXXXXXXXXXFHAEQPDTQRATWVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGVQRVPDDE 2045
            S +   +   E + VEGDLFG+ KR SFR+ DPP G PPR  ++D    G      N+FRNG            GG  QTP A QPSPFAR P      FSAA              GG           YS   P    +    Q                               XXXXXX+PTRSLADDPD   +G                    XXXX    XXXX    F+A  PDTQRATWV+VWGVPPG +N+VL RFLQFG V EQRGQPGSNWLY KYATRLQAEKALAAGHGSRLTDTVMLGVQRVPDDE
Sbjct:   22 SRERGRDGPPEGQVVEGDLFGNPKRQSFRSTDPPTGAPPRGAFHDATAGGXXXXXXNAFRNGGXX--------XGGCGQTPAAAQPSPFARGPMNDS--FSAA-------------GGGXXXXXXXXXXXYSN--PGQTAQQQQQQHGFGARVGFSSEVALVPVEASGNSRGRNVMDXXXXXXIPTRSLADDPDDVRDGGVLFGXXXXXXXXXXXXXXXXXXXVDRMXXXXGIGSFNAA-PDTQRATWVVVWGVPPGKSNQVLIRFLQFGDVVEQRGQPGSNWLYFKYATRLQAEKALAAGHGSRLTDTVMLGVQRVPDDE 316
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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: A0A6H5KSX2_9PHAE (RRM Nup35-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSX2_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 2.440e-39
Identity = 156/309 (50.49%), Postives = 171/309 (55.34%), Query Frame = 3 
Query: 1122 EERFVEGDLFGSTKRPSFRAADPPAGLPPRATYYDGAGAGDVGGNSFRNGIRSGVAGSAGGMGGYAQTPI-AQPSPFARAPTPTGAFFSAATAXXXXXXXXXXAAGGAAPGSAYRGARYSQVSPATRVRPTSDQRQSLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPTRSLADDPDIRDEGADAVAAAEGLRYRRGGGAGGXXXXXXXXXXXXXXXXFHAEQPDTQRATWVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGVQRVPDDE 2045
            E + VEGDLFG+ KR +FR+ DPP G+PPR  Y D A AG        N  RS             QTP  AQPSPFAR P       S+   XXXXXXXXXX  G + PG   +  +  Q     RV  +SD                               XXXXXXX  TRSL                              XXXXXXXXXXXXX   F+A  PDTQRATWV+VWGVPPG +N+VL RFLQFG V EQRGQPGSNWLY+KYATRLQAEKALAAGHGSRLTDTVMLGVQRV DDE
Sbjct:   32 EGQVVEGDLFGNPKRQNFRSTDPPTGVPPRGAYID-ATAGGXXXXXXXNAFRSXXXXXXX----XXQTPASAQPSPFARGPMNAS---SSVAXXXXXXXXXXXXXGYSDPGQTAQ--QQQQHGFGARVGFSSD------------VAFVPVEASGNSRGQNVMDXXXXXXXXXTRSLXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXFGGFNAA-PDTQRATWVVVWGVPPGKSNQVLIRFLQFGDVVEQRGQPGSNWLYLKYATRLQAEKALAAGHGSRLTDTVMLGVQRVLDDE 311
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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: E9HKL2_DAPPU (Nucleoporin NUP35 (Fragment) n=3 Tax=Daphnia TaxID=6668 RepID=E9HKL2_DAPPU)

HSP 1 Score: 76.3 bits (186), Expect = 3.120e-12
Identity = 41/105 (39.05%), Postives = 62/105 (59.05%), Query Frame = 3 
Query: 1806 DTQRATWVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGVQRVPDDETWRALREGRIPPLHAAPPVLARSLP 2120
            D+   TWV V+G PP +A+ VLT+   +GH+ E R     NW+++K+A+RLQA KALA  +G  LTDT+++GV    D       R+  +P + + P +   S P
Sbjct:    4 DSDAGTWVTVFGFPPTAASYVLTQTAMWGHILEHRIPSQGNWMHLKFASRLQARKALAR-NGRLLTDTLIIGVVPCTDGSIMEENRKENMPGM-STPAMRITSTP 106
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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: A0A0P5DW53_9CRUS (Nucleoporin NUP53 n=2 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5DW53_9CRUS)

HSP 1 Score: 75.9 bits (185), Expect = 4.570e-11
Identity = 41/105 (39.05%), Postives = 61/105 (58.10%), Query Frame = 3 
Query: 1806 DTQRATWVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGVQRVPDDETWRALREGRIPPLHAAPPVLARSLP 2120
            D+   TWV V+G PP +A+ VLT+   +GH+ E R     NW+++K+A+RLQA KALA  +G  LTDT+M+GV    D       R+  +  + + P +   S P
Sbjct:  136 DSDAGTWVTVFGFPPSAASYVLTQTGMWGHIMEHRIPSQGNWMHLKFASRLQARKALAR-NGRLLTDTLMIGVVPCTDGAIMEESRKENLQAI-STPSMRVTSTP 238
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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: A0A1V9Z8L5_9STRA (RRM Nup35-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8L5_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.840e-8
Identity = 48/139 (34.53%), Postives = 69/139 (49.64%), Query Frame = 3 
Query: 1824 WVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGVQR--VPDDETWRALREGRIPPLHAAPPVLARSLPGRAANGDMMEIDDADLLGAPPQRPRGDKSLCGRVMALF 2234
            W+ V+G        +L  F   G   + R   G NWLY++Y TRLQAEKALA   GS L+ +VM+GV+R  V + +    +++G      A  P+L+R L    ++ D ME          P+RP     LC R+M   
Sbjct:  128 WITVFGFSAVDMETILRHFQSMGDAVQYRYGRG-NWLYVRYRTRLQAEKALAES-GSTLSGSVMIGVKRCLVSEMDADTPVQQGSND-RKAPAPLLSRELQVAPSDVDFMET---------PRRP---SDLCSRLMRFL 251
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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: A0A836CNV8_9STRA (RRM Nup35-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNV8_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 4.220e-8
Identity = 56/172 (32.56%), Postives = 77/172 (44.77%), Query Frame = 3 
Query: 1818 ATWVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTD-TVMLGVQRVP----------DDETWRALRE-GRIPPLHA------------------------APPVLARSLPGRAANGDMMEIDDADLLGAPPQRPRGDK-SLCGRV 2222
            A WVMV+G+P G   EV+  F  +G V E R   G NW+ ++YAT LQA KALA+G+ +R++   +M+G   +              T R  R     PP H                         APPV  R+   R A      IDD+DLL    + PR  K ++C R+
Sbjct:   86 ARWVMVYGMPAGCVAEVVDHFRVYGQVVENRVGQG-NWVLLRYATVLQARKALASGNHARISGGRIMVGTSAIDAAAAXXXXXXXXATERLARRCASPPPAHVPLGGGARLRPPRQRSPALPSAIGYAPPVRPRATVRRVA-----AIDDSDLL---QEAPRARKWNVCDRI 248
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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: A0A024U1H3_9STRA (RRM Nup35-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U1H3_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.860e-7
Identity = 49/153 (32.03%), Postives = 68/153 (44.44%), Query Frame = 3 
Query: 1791 HAEQPDTQRATWVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGVQR-----VPDDETWRALREGRIPPLHAAPPVLARSLPGRAANGDMMEIDDADLLGAPPQRPRGDKSLCGRVMALF 2234
            H ++       WV V+G P      VL+ F   G+V + R   G NWLY++Y TRLQAEKAL    GS L   VM+GV+R     +  D     + +   PP    P +L+R L     + D+ME             PR    +C R +   
Sbjct:  124 HTQEWGDDELYWVTVFGFPMQDMEVVLSYFQAIGNVAQYRHGRG-NWLYLRYQTRLQAEKALIES-GSTLGGRVMIGVKRCLAWEMDADAPMVNVTDSTSPP----PSMLSRDLLVNPTDVDVMES------------PRRHDDICSRFLRFL 258
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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: A0A6G0XIB8_9STRA (RRM Nup35-type domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIB8_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 5.510e-7
Identity = 45/138 (32.61%), Postives = 62/138 (44.93%), Query Frame = 3 
Query: 1824 WVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGVQRVPDDETWRALREGRIPPLHAAP-PVLARSLPGRAANGDMMEIDDADLLGAPPQRPRGDKSLCGRVMALF 2234
            W+ V+G P    + + + F   G V + R   G NWLYI+Y TRLQAEKAL    GS L+  +M+G +R    E         +   HA P P+L+R L       D+ME             PR    +C R +   
Sbjct:  152 WITVFGFPIQDMDAIFSYFQTLGDVVQYRYGRG-NWLYIRYRTRLQAEKALQES-GSTLSGRIMIGTKRCLAWEMDADAPVCNLTDTHAPPAPLLSRDLQVNPPEIDVMES------------PRRQDDMCSRFLRFL 275
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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: A0A485LFV7_9STRA (Aste57867_19034 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LFV7_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.510e-6
Identity = 47/138 (34.06%), Postives = 61/138 (44.20%), Query Frame = 3 
Query: 1824 WVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGVQRVPDDETWRALREGRIPPLHAAP-PVLARSLPGRAANGDMMEIDDADLLGAPPQRPRGDKSLCGRVMALF 2234
            W+ V+G P    + V + F   G V + R   G NWLY++Y TRLQAEKAL    GS L   VM+G +R    E         I   HA P P+L+R L       D+ME             PR    +C R +   
Sbjct:  137 WITVFGFPIQEMDAVFSYFQTLGDVVQYRYGRG-NWLYVRYRTRLQAEKALHES-GSTLGGRVMIGTKRCLAWEMDADAPVINITDHHAPPAPLLSRDLQVNPPEVDIMES------------PRRQDDVCSRFLRFL 260
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BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Match: T0PIB6_SAPDV (RRM Nup35-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PIB6_SAPDV)

HSP 1 Score: 61.2 bits (147), Expect = 1.820e-6
Identity = 45/139 (32.37%), Postives = 64/139 (46.04%), Query Frame = 3 
Query: 1824 WVMVWGVPPGSANEVLTRFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGVQR--VPDDETWRALREGRIPPLHAAPPVLARSLPGRAANGDMMEIDDADLLGAPPQRPRGDKSLCGRVMALF 2234
            W+ V+G        +L  F   G   + R   G NWLY++Y TRLQAEKAL    G+ L  TVM+GV+R  V + +      +G       AP +L+R L     + D ME         PP+R     + C R++   
Sbjct:  128 WITVFGFSAVDMEAILKHFQSIGDAVQYRYGRG-NWLYVRYRTRLQAEKALGES-GATLGGTVMIGVKRCLVSEMDADTPAHQGSTSSTTPAP-LLSRELQVAPCDDDFME---------PPRR---QTNFCSRLLRFL 251
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7FKE7_ECTSI9.820e-5247.35RRM Nup35-type domain-containing protein n=1 Tax=E... [more]
A0A6H5KSX2_9PHAE2.440e-3950.49RRM Nup35-type domain-containing protein n=1 Tax=E... [more]
E9HKL2_DAPPU3.120e-1239.05Nucleoporin NUP35 (Fragment) n=3 Tax=Daphnia TaxID... [more]
A0A0P5DW53_9CRUS4.570e-1139.05Nucleoporin NUP53 n=2 Tax=Daphnia magna TaxID=3552... [more]
A0A1V9Z8L5_9STRA3.840e-834.53RRM Nup35-type domain-containing protein n=1 Tax=A... [more]
A0A836CNV8_9STRA4.220e-832.56RRM Nup35-type domain-containing protein n=1 Tax=T... [more]
A0A024U1H3_9STRA1.860e-732.03RRM Nup35-type domain-containing protein n=1 Tax=A... [more]
A0A6G0XIB8_9STRA5.510e-732.61RRM Nup35-type domain-containing protein n=2 Tax=A... [more]
A0A485LFV7_9STRA1.510e-634.06Aste57867_19034 protein n=1 Tax=Aphanomyces stella... [more]
T0PIB6_SAPDV1.820e-632.37RRM Nup35-type domain-containing protein n=2 Tax=S... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:562673..568609 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score74.3
Seed ortholog evalue1.5e-10
Seed eggNOG ortholog6669.EFX65288
KEGG koko:K14313
KEGG TC1.I.1
KEGG Pathwayko03013,map03013
KEGG ModuleM00427
GOsGO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005198,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0006355,GO:0006606,GO:0006607,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0006997,GO:0006999,GO:0008104,GO:0008150,GO:0008289,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0012505,GO:0015031,GO:0015833,GO:0016043,GO:0017038,GO:0017056,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0031967,GO:0031975,GO:0032991,GO:0033036,GO:0033365,GO:0034504,GO:0034613,GO:0042886,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044613,GO:0044615,GO:0045184,GO:0046907,GO:0050789,GO:0050794,GO:0051169,GO:0051170,GO:0051171,GO:0051179,GO:0051234,GO:0051252,GO:0051641,GO:0051649,GO:0060255,GO:0065007,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.Functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs)
EggNOG OGs38DK6@33154,3B9SE@33208,3CWD6@33213,420BH@6656,KOG4285@1,KOG4285@2759
COG Functional cat.D
Best tax levelArthropoda
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_002340.1
Exons6
Model size2933
Cds size1272
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1669.1prot_P-fluviatile_contig13.1669.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 564292..567922 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815543.935633-UTR-P-fluviatile_contig13:562672..5626951622815543.935633-UTR-P-fluviatile_contig13:562672..562695Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 562673..562695 +
1693562208.7289772-UTR-P-fluviatile_contig13:562672..5626951693562208.7289772-UTR-P-fluviatile_contig13:562672..562695Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 562673..562695 +
1622815543.948459-UTR-P-fluviatile_contig13:563340..5642911622815543.948459-UTR-P-fluviatile_contig13:563340..564291Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 563341..564291 +
1693562208.7399244-UTR-P-fluviatile_contig13:563340..5642911693562208.7399244-UTR-P-fluviatile_contig13:563340..564291Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 563341..564291 +
1622815544.0265126-UTR-P-fluviatile_contig13:567922..5686091622815544.0265126-UTR-P-fluviatile_contig13:567922..568609Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 567923..568609 +
1693562208.7889445-UTR-P-fluviatile_contig13:567922..5686091693562208.7889445-UTR-P-fluviatile_contig13:567922..568609Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 567923..568609 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815543.958965-CDS-P-fluviatile_contig13:564291..5644801622815543.958965-CDS-P-fluviatile_contig13:564291..564480Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 564292..564480 +
1693562208.7497373-CDS-P-fluviatile_contig13:564291..5644801693562208.7497373-CDS-P-fluviatile_contig13:564291..564480Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 564292..564480 +
1622815543.9696841-CDS-P-fluviatile_contig13:564890..5656691622815543.9696841-CDS-P-fluviatile_contig13:564890..565669Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 564891..565669 +
1693562208.7566853-CDS-P-fluviatile_contig13:564890..5656691693562208.7566853-CDS-P-fluviatile_contig13:564890..565669Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 564891..565669 +
1622815543.9835243-CDS-P-fluviatile_contig13:566161..5662641622815543.9835243-CDS-P-fluviatile_contig13:566161..566264Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 566162..566264 +
1693562208.7640345-CDS-P-fluviatile_contig13:566161..5662641693562208.7640345-CDS-P-fluviatile_contig13:566161..566264Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 566162..566264 +
1622815544.000871-CDS-P-fluviatile_contig13:566925..5670171622815544.000871-CDS-P-fluviatile_contig13:566925..567017Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 566926..567017 +
1693562208.771755-CDS-P-fluviatile_contig13:566925..5670171693562208.771755-CDS-P-fluviatile_contig13:566925..567017Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 566926..567017 +
1622815544.0155497-CDS-P-fluviatile_contig13:567813..5679221622815544.0155497-CDS-P-fluviatile_contig13:567813..567922Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 567814..567922 +
1693562208.7801254-CDS-P-fluviatile_contig13:567813..5679221693562208.7801254-CDS-P-fluviatile_contig13:567813..567922Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 567814..567922 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1669.1

>prot_P-fluviatile_contig13.1669.1 ID=prot_P-fluviatile_contig13.1669.1|Name=mRNA_P-fluviatile_contig13.1669.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=424bp
MPFSSANAHFALCNPVPIPCHFMSSRPLPSHVALSRSILSTQGHHEAQQE
ERFVEGDLFGSTKRPSFRAADPPAGLPPRATYYDGAGAGDVGGNSFRNGI
RSGVAGSAGGMGGYAQTPIAQPSPFARAPTPTGAFFSAATATPTNAFFSA
AAAGGAAPGSAYRGARYSQVSPATRVRPTSDQRQSLGGGGGGEAALVPVE
ANGAGRGQNVTDDDDDDDDMPTRSLADDPDIRDEGADAVAAAEGLRYRRG
GGAGGGDARGGLRVGGLTVGGFHAEQPDTQRATWVMVWGVPPGSANEVLT
RFLQFGHVEEQRGQPGSNWLYIKYATRLQAEKALAAGHGSRLTDTVMLGV
QRVPDDETWRALREGRIPPLHAAPPVLARSLPGRAANGDMMEIDDADLLG
APPQRPRGDKSLCGRVMALFGFY*
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mRNA from alignment at P-fluviatile_contig13:562673..568609+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1669.1 ID=mRNA_P-fluviatile_contig13.1669.1|Name=mRNA_P-fluviatile_contig13.1669.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5937bp|location=Sequence derived from alignment at P-fluviatile_contig13:562673..568609+ (Porterinema fluviatile SAG_2381)
GGAAACTCCGGTGGTATGAATGGGTGAGTTTCTGGGTAGCTGCGCAGGAA
CGCTTCCGATCTCAGCTGCAACAAAACACAGCGCTAGCTCTCGTCCCCCC
CTCAGATATCCACAACACACTTCATCGCTCGCTCGCTCTCTCTCTCTCTT
GAGGACAACCGCGTCAGGATTCGTCATCATCTCTGAAGCCGTAATATTGA
CATGATTCTAACACTGTGGTGCGTGTTAGGTCGGAAGCATGCCCTCTGTT
CGAGATGGATTACGCGCGCCTCCTGGATGGGGTGTGCCGTTGACCCATTT
TTTTGTTGTTTGGCCCGCGTTCCGGCGCCATTGGTGCATGCGTAGCAATG
TCTTGCTTGGGGTCAAGGTTGGTGCTTTTGGCGTGTTATTCCTACAAACA
CCACCTGCAAGTGTTAAACTATTTCTTCGCTTTTACTCACCCAATTTCCA
TAACAGTGCACTTATGCCTCACGACACACCGCGTATCGACGGACGGCGCG
CCTTCCCTTCTTTTGCCGTAACAATGACCACCCCTCTGTTCCCGCGCCCG
CCCATTCTAGTGCCGTTCACTTTCCAACACCAATCAATTCGTCACCCTGA
CCTCCCTGACAATAACCACCGTGGGTTTGACGCCTACAAAATTCTTTTTT
CATTCTTCACGGAAACAGGGGTGGTGCGGGTGACGGCGGTGCCAGGGAGG
GATACCAGACGCCGGGCGGAGGGAGAAGTGAGAGAAACCAATCAAGACCC
AGCGCGTATGAGGGGGCTTTAGGAACATGTTTATTTTATCTTGCCTTCTC
TTTGTAGCCTTCTCCTCCTTCCCTCGAAGCATGTGTTTGAGGCAGCCTCC
ACCGTCCAAAATGCGTCATGAAGCCGCACACACTGTTGTGTGTTTGTGCG
ACACACGAATGAGGACACTTGTTGTTTGAGGACGAGATGTTTCTTACATG
CGCAAAACGTCTTCAAAACCATTCCTCTTGAACAAAGCGTCGCGTGAATC
TTGCGAGTAGGACTGATGCGTAAAGCTAGGCAGCGCCGGATCCCCAGCGA
CAACGTTTCAACTTGACGTTTAAGAAGTCTTATGGAGTATCATCGAGGAC
ATCGAGAGACGAATCCCTTGACGGTGGATACAACGCAGCCTTGTGTACAA
TGACTGCAGTCGGGGGGTTGCGGTTTGTCTTTGCGTTGCTTTTGCGTCGA
CGATGGGTTAGGTGAACGGTCCCGGAACCCGTGCAATCGATTCACGAACC
GTATTCCTCGCATGGTTGCCTTGCGGAAGATTGTTCGTACAGCATATGGG
CACGCCACGACACTCACGCAAAACTTTCTTCATTCTGCTGGTTAGTTTCA
TTCTGCTTGTTGTCGAAACCAATCATCTCTGAATCTTGGGAAAGCATGCC
TTATGAATTGCGCCCATCCCAGGCTTCGGCTGGGCTTCGTGAAACCTCAT
TTATCCCTCAAACTCTCCTCACAGAACACACAAACACGCACTTCTTGCGG
CGATTCCCGCGCGCCGCGCGAAGAAATTTGGCGTCCGTTCGGTGCTTCTG
CACGCCGCGTCTCTGTGTACATGCGTGCGTATCCTTTCTACTCAAACAGC
GCTTTCGACAGCAGCGGCGATGCCCTTTTCCTCTGCAAATGCCCATTTCG
CCTTATGTAACCCCGTACCCATCCCATGTCATTTCATGTCATCCCGTCCG
CTCCCGTCCCATGTCGCCCTTTCACGCTCGATCCTTTCCACCCAAGGTCA
TCACGAGGCGCAGCAGGAGGAGCGATTTGTCGAGGGTGACCTTTTCGGGA
GCACCAAGGTGAATCTTGTCAAAGAATTTTCGACACTTTAGGACCGACAT
GCGAACTTAAGTTGCCTGTGTTCTTCCCTACATCCCTCGCTTGGCGCTGG
GTCCGCAGCGACACCGTTACGGCTGTTTGCGCCCAGTTTGAATGCTTTCG
CTTTTCCGAGAATCGAAAGAGTCTTATTCATCCATTTCTTGACGGTGTCA
AGGTGCAGCCATGCTTTGCTCAGCTCATGAAAGGCCGTCGTTTCCTTGGT
TCGAGGTGCGCGGCGGTTTGATTTTTTGCTTATGGCGGCCTTTGCGTGAG
GGCGGGATCATTCCCAGATGCTGCTGTGTGTTCGAAGCCCCCCCCTTCAT
CCGTCCTTCTCCACCAACTTTCCCCGCCTTGTCGCATTGCATCCTCATCC
CCGACACGCTGGCGAAAGCGCCCAAGCTTCCGTGCCGCGGACCCTCCCGC
CGGGCTTCCCCCGCGAGCAACGTACTACGACGGCGCCGGCGCCGGCGATG
TCGGCGGTAACTCCTTCAGGAACGGCATCCGCAGCGGCGTTGCCGGCAGC
GCAGGGGGCATGGGAGGGTACGCCCAGACCCCGATCGCGCAGCCGTCGCC
GTTCGCGCGCGCGCCCACCCCGACAGGCGCCTTCTTTTCGGCGGCCACAG
CCACGCCGACGAACGCTTTTTTTTCGGCAGCAGCAGCAGGTGGTGCGGCC
CCGGGCTCCGCGTACAGGGGAGCGAGGTACAGCCAGGTCAGTCCCGCCAC
GAGAGTGCGGCCGACATCCGACCAGCGCCAGAGCTTAGGCGGCGGCGGCG
GCGGGGAGGCGGCTCTCGTGCCGGTGGAAGCGAACGGTGCCGGCCGCGGG
CAGAACGTGACGGACGACGACGACGACGACGACGACATGCCGACACGATC
CCTGGCGGACGATCCTGACATCCGCGACGAAGGGGCCGACGCGGTGGCGG
CGGCGGAGGGGCTCAGGTACAGGCGCGGAGGCGGTGCGGGGGGGGGCGAC
GCAAGGGGAGGCCTTCGGGTGGGAGGGCTTACCGTCGGCGGTTTCCACGC
GGAGCAGCCCGACACACAGAGGGCGACGTGGGTCATGGTGTGGGGCGTGC
CACCCGGATCCGCGAACGAAGTCCTCACCCGCTTCCTGCAGTTCGGCCAT
GTCGAGGAGCAGCGGGGGCAGCCGGGTAGCAACTGGCTCTACATCAAGTG
AGAAACAGATTGGGGGCACGTCCCGTGTGTGTTGTATGTGTTCAAGCTGC
TTATTTTTTCAGCAGGCGTGCCCCGTAATTTTCCTCGTTTTCCCAGCTGT
ATGGCTGAGGACGGTGCCTTGCTGTTGTACCACGCTGTTAGTTTTCGTCG
CTTGCGCGAGGGACCCCGCCACCGACTCTCGAAACGTGTAGGATTGCAGG
CCTTTTGTCCCGTTTTCCCCCTGTACTTCGGCCTACTCTTGCCGGGCGCG
CTGCGCCCACCGTCCTGCCTCTAGTTCGATGTCTCTTCGGGTGCGTGTTT
TTCACCCGAGCGCAGACTTTACCACCCATTGTGCTCCGGGCTGATGATCG
TCTGGATCCCATTTGTTTCATGACTACATTTTCGCTTCCCTTGTTGGCGG
TGTTGACGTGGTTGTTGTTGATGTTGAGTTAAGGTGTTGATGTTGATGTC
GATGCGTTCCTTGTGACCTTTTGCTGCTCCTGGCGACAGGTACGCGACGA
GGTTGCAGGCAGAGAAGGCGCTCGCCGCGGGGCACGGATCTCGCTTGACG
GATACGGTGATGCTCGGCGTGCAGCGGGTGCCGGACGACGAGGTGAAAGT
CGCCGCCTGCATGCGGGGGGTGTCACCGTGTGCGGGAGTACTACGTTCCC
GGGTTGAAGTTCGTAGATATTCTGCTTGAATTGGGTTACAAGGTAATCAT
CTAATCACGCAATCAGGGTTTCGACACTGGCTGAGCGAATCGGGGTTAAC
ACGTGAAGATGCCTTGGGCGAAAATAATCTCGCCCTGGCGCGCATATTAT
AGCCGACCTTTGAGGGTTTTGCCGCCTGGTGCTTTTTTGGGCGAGATCTC
GCGCATCACCACGCACTCGCTCATGGGGTCGGCTCAGTCGTGCATGACGC
TTGGCGAGGAGTCCGGGGGGTATGATTGGTTCGGTTGCGATTTAAGTGTG
CCGTGACCGCAGCGCGCGTGTTTATGTTGACAAGCGTACGGAGTTCGAAG
TCTTGCGCCAGAAATTCATGTTGTTGATGGTCGTTGTTGTTTATTTTCAG
CATTGGTAGCCACGCTCTTTCACCTCATTTCGGCACTCTTGTGGAGAAAA
CAAAACGACTGCGTCTTCATACGTATTTGACCGACCCGCCATGCCCAGCG
CAGTTACCCTCGGGGGCCTGAACGACGATGAAGCTGCCGTTACTCCTGAA
GCCGGTGTTGTCGTCGCTGCCATTTCCCTACCTAACCTACTCTGCTTGTC
CAGACATGGCGAGCGTTAAGAGAGGGGCGCATTCCACCGCTGCATGCCGC
GCCACCAGTCCTTGCTAGGTCACTGCCCGGGAGAGCCGCCAACGGGTGAG
TGCCGTCGCCAGCCAGCGTCTTAGACGCGGATGTCGAGAGTGAAGGATTA
GACAAAAGCATTTCGTTGCACTAGTGGAAAGCAGCTGAGGCGCCTGCGTG
CTTGATCGCCTCATTCGTTCAGCGAGAGAACCGCAACGCGGGTAGCCACT
TGCCCTCTACATCAATCGCGGAGTTGAGTTGTATTCCTTGCTGCGTTCAA
CAGTTACGGCCGCACCCAGCGTCGGAGGAAGCGCACGTTGCGCATGAAAA
GGTGCAGCCGCGGCGCAGACTCCCGCGACAATTTTTGAGGATGAATCTTT
CCGTGTCTTCTCTCCATGAATGGTTTGCCGTTGGGTTATTTAACTTCCTG
TCCGAAGATGCCATTGGGGTACAGCAGTCCACGTGAGAAGGCTTCAAGAA
GGGAACGTATATCCGTTTCCGAATATTCCATTGGATACAGAAAGTTCGCG
TGAGAAAGCTTCAAACAGGCTTGCGCGATTGCACCTGCCTCGGCACCAAA
AATATTATCAGAGGCATGCCTGCGCGTGCATCCGTCCCTCATCGGCCGAT
GGCGCCGCGGCCTCGAACGCTTCGTCTGATGCCCGGCTCGGCCTACCAAC
CGGACACAAGGAGGTACTCCGTGGGCAACTTCGTACCACACTGTCGGTGT
ATCGGAGGGTGCTTACCGCGACGCTAATTGTCGCCAACGAGAATTGTTGC
CGCCTCCTTTTCCTCGTCCTTTCCTGCTCCTTCTCGTCCTCGGCCATTCC
TCTCCCGCTCTGCCACGCGCCTCCGGTCGTCCGGAGTGCAGGGATATGAT
GGAGATCGACGACGCGGACTTGCTGGGCGCCCCTCCTCAGAGGCCGCGCG
GGGACAAGAGCTTGTGCGGGAGGGTCATGGCTCTCTTCGGGTTCTACTGA
GATGAGAGGGAAAACGCTTGTATTTCTGCTTCTAGAAAGAAAAAGCTACA
CACGTTGCCTTGAATATTGGAATTCGAATCCAACGGTTATGTATTACTCC
TTCGTATTTGCTAGGTGATGTGCGTTGTGCGTCTGGGTAGCTTCGGGTCG
TGGAAGGGAGACTGCGGCCTCTGGCGGCGGATTTTTGGTGCTGATCGGGA
AGAGGTTTCAGCGAAGGGCGCGCCGGCGATTCAGTTGGCCTGCCCTCAGC
TTGCCGTGACAGCGAGCTCAACGGTTATTCGAAAGAAGGAAGCCGTGACA
ACGGGACCGGCAGCCGTTTGAAGCAGCAGTGTGTTGTTCGTGTGTATCGC
ATATGGTTGAGACGGGTGTGTTTTCGATTTTGTTGGATGTTGTGAGCCCC
GCGGCTGCGTGTGGTGAGTCTCTCGTTGAGATGCGCGCCCGCGTGTTCGC
GTTGTCAGCCAGGCTCAGGCGCGACGAGCGGACAGGCTGAAAATGGCACA
TTTTTTGTGTCTTTCGCCCCAAGCTTGTCGCCGGTGTTGAGCAGCGCGAT
GCTGATCAAGGGCTGGCACGGCGGTGGTGAGGGTGATGGGGAGGCGTCGG
CTGCAGTGACCAAGTTAAGTCGTGGGTGTCTCGATGGTGTTTGTGGATGG
ATAAAGCCTTCATAGCCGACGATCGTATACACCGACC
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:562673..568609+

>mRNA_P-fluviatile_contig13.1669.1 ID=mRNA_P-fluviatile_contig13.1669.1|Name=mRNA_P-fluviatile_contig13.1669.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2544bp|location=Sequence derived from alignment at P-fluviatile_contig13:562673..568609+ (Porterinema fluviatile SAG_2381)
ATGCCCTTTTCCTCTGCAAATGCCCATTTCGCCTTATGTAACCCCGTACC
CATCCCATGTCATTTCATGTCATCCCGTCCGCTCCCGTCCCATGTCGCCC
TTTCACGCTCGATCCTTTCCACCCAAGGTCATCACGAGGCGCAGCAGGAG
GAGCGATTTGTCGAGGGTGACCTTTTCGGGAGCACCAAGATGCCCTTTTC
CTCTGCAAATGCCCATTTCGCCTTATGTAACCCCGTACCCATCCCATGTC
ATTTCATGTCATCCCGTCCGCTCCCGTCCCATGTCGCCCTTTCACGCTCG
ATCCTTTCCACCCAAGGTCATCACGAGGCGCAGCAGGAGGAGCGATTTGT
CGAGGGTGACCTTTTCGGGAGCACCAAGCGCCCAAGCTTCCGTGCCGCGG
ACCCTCCCGCCGGGCTTCCCCCGCGAGCAACGTACTACGACGGCGCCGGC
GCCGGCGATGTCGGCGGTAACTCCTTCAGGAACGGCATCCGCAGCGGCGT
TGCCGGCAGCGCAGGGGGCATGGGAGGGTACGCCCAGACCCCGATCGCGC
AGCCGTCGCCGTTCGCGCGCGCGCCCACCCCGACAGGCGCCTTCTTTTCG
GCGGCCACAGCCACGCCGACGAACGCTTTTTTTTCGGCAGCAGCAGCAGG
TGGTGCGGCCCCGGGCTCCGCGTACAGGGGAGCGAGGTACAGCCAGGTCA
GTCCCGCCACGAGAGTGCGGCCGACATCCGACCAGCGCCAGAGCTTAGGC
GGCGGCGGCGGCGGGGAGGCGGCTCTCGTGCCGGTGGAAGCGAACGGTGC
CGGCCGCGGGCAGAACGTGACGGACGACGACGACGACGACGACGACATGC
CGACACGATCCCTGGCGGACGATCCTGACATCCGCGACGAAGGGGCCGAC
GCGGTGGCGGCGGCGGAGGGGCTCAGGTACAGGCGCGGAGGCGGTGCGGG
GGGGGGCGACGCAAGGGGAGGCCTTCGGGTGGGAGGGCTTACCGTCGGCG
GTTTCCACGCGGAGCAGCCCGACACACAGAGGGCGACGTGGGTCATGGTG
TGGGGCGTGCCACCCGGATCCGCGAACGAAGTCCTCACCCGCTTCCTGCA
GTTCGGCCATGTCGAGGAGCAGCGGGGGCAGCCGGGTAGCAACTGGCTCT
ACATCAACGCCCAAGCTTCCGTGCCGCGGACCCTCCCGCCGGGCTTCCCC
CGCGAGCAACGTACTACGACGGCGCCGGCGCCGGCGATGTCGGCGGTAAC
TCCTTCAGGAACGGCATCCGCAGCGGCGTTGCCGGCAGCGCAGGGGGCAT
GGGAGGGTACGCCCAGACCCCGATCGCGCAGCCGTCGCCGTTCGCGCGCG
CGCCCACCCCGACAGGCGCCTTCTTTTCGGCGGCCACAGCCACGCCGACG
AACGCTTTTTTTTCGGCAGCAGCAGCAGGTGGTGCGGCCCCGGGCTCCGC
GTACAGGGGAGCGAGGTACAGCCAGGTCAGTCCCGCCACGAGAGTGCGGC
CGACATCCGACCAGCGCCAGAGCTTAGGCGGCGGCGGCGGCGGGGAGGCG
GCTCTCGTGCCGGTGGAAGCGAACGGTGCCGGCCGCGGGCAGAACGTGAC
GGACGACGACGACGACGACGACGACATGCCGACACGATCCCTGGCGGACG
ATCCTGACATCCGCGACGAAGGGGCCGACGCGGTGGCGGCGGCGGAGGGG
CTCAGGTACAGGCGCGGAGGCGGTGCGGGGGGGGGCGACGCAAGGGGAGG
CCTTCGGGTGGGAGGGCTTACCGTCGGCGGTTTCCACGCGGAGCAGCCCG
ACACACAGAGGGCGACGTGGGTCATGGTGTGGGGCGTGCCACCCGGATCC
GCGAACGAAGTCCTCACCCGCTTCCTGCAGTTCGGCCATGTCGAGGAGCA
GCGGGGGCAGCCGGGTAGCAACTGGCTCTACATCAAGTACGCGACGAGGT
TGCAGGCAGAGAAGGCGCTCGCCGCGGGGCACGGATCTCGCTTGACGGAT
ACGGTGATGCTCGGCGTGCAGCGGGTGCCGGACGACGAGGTACGCGACGA
GGTTGCAGGCAGAGAAGGCGCTCGCCGCGGGGCACGGATCTCGCTTGACG
GATACGGTGATGCTCGGCGTGCAGCGGGTGCCGGACGACGAGACATGGCG
AGCGTTAAGAGAGGGGCGCATTCCACCGCTGCATGCCGCGCCACCAGTCC
TTGCTAGGTCACTGCCCGGGAGAGCCGCCAACGGACATGGCGAGCGTTAA
GAGAGGGGCGCATTCCACCGCTGCATGCCGCGCCACCAGTCCTTGCTAGG
TCACTGCCCGGGAGAGCCGCCAACGGGGATATGATGGAGATCGACGACGC
GGACTTGCTGGGCGCCCCTCCTCAGAGGCCGCGCGGGGACAAGAGCTTGT
GCGGGAGGGTCATGGCTCTCTTCGGGTTCTACTGAGGATATGATGGAGAT
CGACGACGCGGACTTGCTGGGCGCCCCTCCTCAGAGGCCGCGCGGGGACA
AGAGCTTGTGCGGGAGGGTCATGGCTCTCTTCGGGTTCTACTGA
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