prot_P-fluviatile_contig12.1601.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig12.1601.1
Unique Nameprot_P-fluviatile_contig12.1601.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length352
Homology
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 3.540e-99
Identity = 164/255 (64.31%), Postives = 190/255 (74.51%), Query Frame = 0
Query:    2 PPNPPATIQLAAGSVVIIFHVLHGQRQSPDKLPQSLVGLLEDGSLAKTGVGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVDVGPRRGLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVAYLLFGRISELSDPIFKDAEELHIGDPVRLYTRGGNDCVGEGRIIAYGQETWGSTGILLAPRHATRGHSRRWVVRISKVHVSLASTLYPDETAVPGTQPTAHVGDRVDQTLLWDAARMRKAAA 256
            P NPPATIQLAAG  V+IFHVLHGQR  P +LP  LV LLED  L KTGVGIKGDCTRL  F+GV+V + VDL SLA++RKV++G RRGLADLC+HLLG+ L K   +RLS+WN   LS +QK YAA DAY   LL GRI ELSD IF+DAEELH+GD VRLYTR GNDCVGEG I+ +  ETWG+TG  L PR ATR  +RRW VR+ +VHV  A TLYPD T   GT  TA +  RVD  +LWDA+R+RK  A
Sbjct:  268 PANPPATIQLAAGKRVVIFHVLHGQRSVPAELPDPLVDLLEDTKLTKTGVGIKGDCTRLTSFYGVEVAHAVDLRSLAVERKVELGLRRGLADLCVHLLGQQLPKDPTVRLSKWNKLDLSDDQKRYAALDAYACLLLHGRIGELSDSIFRDAEELHVGDRVRLYTRAGNDCVGEGCIVEHTDETWGTTGFYLVPRRATRRFARRWAVRLDRVHVPRAKTLYPDATDPRGTPATAQLASRVDSVILWDASRLRKTTA 522          
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: A0A6H5KEU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU8_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 2.650e-51
Identity = 100/189 (52.91%), Postives = 123/189 (65.08%), Query Frame = 0
Query:   77 LALQRKVDVGPRRGLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVAYLLFGRISELSDPIFKDAEELHIGDPVRLYTRGGNDCVGEGRIIAYGQETWGSTGILLAPRHATRGHSRRWVVRISKVHVSLASTLYPDETAVPGTQPTAHVGDRVDQTLLWDAARMRKAAAGAGDGGRGA 265
            +A++RKV++  RRGLADLC++LL K L K   +RLS+WN   LS +QK               RI ELSD IF+DAEE+H+GD VRLYTR GNDCVGEG I+ +  ETWG+TGI L PR ATRG +RRW V + +VHV  A  LYPD T   G   TA +  RVD  +LWDA+R+RK  A    G  GA
Sbjct:    1 MAVERKVELWFRRGLADLCVNLLEKQLPKDPIVRLSKWNKLDLSDDQKR--------------RIGELSDSIFRDAEEMHVGDSVRLYTRAGNDCVGEGCIVEHTDETWGTTGIYLVPRRATRGFARRWAVHLDRVHVPRAKALYPDATDRRGDPATAQLASRVDSVILWDASRLRKMTATPSAGAAGA 175          
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 1.650e-27
Identity = 101/269 (37.55%), Postives = 136/269 (50.56%), Query Frame = 0
Query:    8 TIQLAA-GSVVIIFHVLHGQRQS-PDKLPQSLVGLLEDGSLAKTGVGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVDVGPRRGLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVAYLLFGRISELSDPIFKDA-EELHI-GDPVRLYTRGGNDCVGEGRIIAYGQ-----ETWGSTGILLAPRHATR-GHSRRWVVRISKVHVSLASTLYPDETAVPGT-----QPTA-------HVGDRVDQTLLWDAARMRKA 254
            T+QLA       +FH+  G R++ P    +SL  LL D ++ K GV +KGD +RLQR +GV+   +VDL S A    VD+ P R LA +    LGKSL K   +R SRW+   L++ Q  YA  DAY A +L   I +  DPIF  A  ++ I G  VRLYT     CVG G++          E WG T + LA R  TR G  +R VV++  V V   ++L P + A P       QP         H G   +  +LWD   +R A
Sbjct:  110 TLQLALPDGTAYLFHLQRGTRRTRPSTFNRSLKVLLNDPTITKVGVAVKGDGSRLQRDYGVETCGMVDLRSYARTCWVDL-PCRSLAGMVATALGKSLSKNPSVRFSRWSQAELTQNQVNYACLDAYAAVVLHAEIGKSKDPIFCMAPSDIPIAGTEVRLYTNNHESCVGVGQVQDEEAARSLVEKWG-TDLKLAQREGTRSGGLKRVVVKV--VDVLKPASLTPHQDAPPXXXXXXGQPRVAVSMNDVHSGKGFEGFVLWDLVHVRLA 374          
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: D7FIV1_ECTSI (Similar to Werner syndrome protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV1_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 1.610e-19
Identity = 85/258 (32.95%), Postives = 123/258 (47.67%), Query Frame = 0
Query:    3 PNPPATIQLAA-GSVVIIFHVLHGQRQSPDK-LPQSLVGLLEDGSLAKTGVGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVDVGPRRGLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVAYLLFGRISELSDPIFKDAE-ELHIGDPVRLYTRGGNDCVGEGRIIAYGQETWGSTGILLAPRHATRGHSRRWVVRISKVHVSLASTLY---PDETAVPG--TQPTAHVGDRVDQTLLWDAARMR 252
            PNP +T+QL+        F +  G +++     P++L  LLE+ S+AK GV I  D T L+R +G++V N VDL + A Q  V+  P R LA +   LLG+ L K   +R SRW+ + LS  Q+                +++  DPIF     ELH G  VRLY+     CVG G +     +T         P    +G   + VV +S V    A T +   P   +  G  T   A+ GDR+   +LWD A +R
Sbjct:  130 PNPVSTVQLSLPDGTAYCFQLQRGNKKTTSSNFPKALQNLLENPSIAKVGVNINSDATYLERDYGIEVANTVDLRTYARQCWVET-PSRSLAGMASSLLGRQLPKDPVIRSSRWS-SPLSDNQE----------------VAKFQDPIFSPPPVELHPGTKVRLYSNNHASCVGVGEV--QDDDTAAEALAGWFPGARRKGRLTQVVVGLSGVFKPAAYTAHKGTPSAASGVGRVTMDEAYKGDRL---VLWDVAHVR 364          
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 1.030e-14
Identity = 80/257 (31.13%), Postives = 113/257 (43.97%), Query Frame = 0
Query:    3 PNPPATIQLAA-GSVVIIFHVLHGQRQSPDK-LPQSLVGLLEDGSLAKTGVGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVDVGPRRGLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVAYLLFGRISELSDPIFKDAEELHIGDPVRLYTRGGNDCVGEGRIIAYGQETWGSTGILLAPRHATRGHSRRWVVRISKVHVSLASTLY---PDETAVPG--TQPTAHVGDRVDQTLLWDAARMR 252
            PNP +T+QL+        F +  G +++     P++L  LLE+ S+AK GV I  D T L+R +G++V N VDL + A Q  V+  P R LA +   LLG+ L K   +RLSRW+                          S LSD            D VRLY+     CVG G +     +T         P    +G   + VV +S V    A T +   P   +  G  T   A+ GDR+   +LWD A +R
Sbjct:  438 PNPVSTVQLSLPDGTAYCFQLQRGNKKTTSSNFPKALQNLLENPSIAKVGVNINSDATYLERDYGIEVANTVDLRTYARQCWVET-PSRSLAGMASSLLGRQLPKDPVIRLSRWS--------------------------SPLSD------------DQVRLYSNNHASCVGVGEV--QDDDTAAEALAGWFPGARRKGRLTQVVVGLSGVFKPAAYTAHKGAPRAASGVGRVTMDEAYKGDRL---VLWDVAHVR 650          
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: A0A8C5V198_MICMU (DNA helicase n=8 Tax=Lemuriformes TaxID=376915 RepID=A0A8C5V198_MICMU)

HSP 1 Score: 80.1 bits (196), Expect = 1.230e-12
Identity = 52/141 (36.88%), Postives = 77/141 (54.61%), Query Frame = 0
Query:    7 ATIQLAAG-SVVIIFHVLHGQRQSPDKLPQSLVGLLEDGSLAKTGVGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVDVGPRRGLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVAYLLFGRISELSD 146
            A IQL    S   +FHV      +    PQ L  LLE+ ++ K GVGI+GD  +L R F + +++ V+L  +A  +K+       L  L  HLLGK L K + +R S W+   LS++QK YAA DAY   +++ ++  L D
Sbjct:   99 ALIQLCVSESKCYLFHV-----SAASVFPQGLKNLLENEAIKKAGVGIEGDQWKLLRDFDIKLKSFVELTDVA-NKKLKCRETWSLNGLVKHLLGKQLLKDKSIRCSDWSNFPLSKDQKLYAATDAYAGLIIYRKLEILGD 233          
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: A0A7S0WQT4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WQT4_9CHLO)

HSP 1 Score: 79.0 bits (193), Expect = 2.130e-12
Identity = 54/119 (45.38%), Postives = 65/119 (54.62%), Query Frame = 0
Query:   24 HGQRQSPDK--LPQSLVGLLEDGSLAKTGVGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVDV------GPRRGLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVA 134
            HGQ+       LP SLV LL D SL K GVGI+GDC RL R FGV V+  VDL  +A     D       G   GLA L   LLG+ ++K Q  + S W    LS  Q  YAA+DA+V+
Sbjct:  271 HGQQPHAHARGLPPSLVRLLSDPSLIKAGVGIRGDCARLARDFGVTVRGAVDLRVVARAVAPDALVARTQGAGAGLAGLASALLGRVVDKAQ--QCSHWGREVLSGAQVAYAAQDAWVS 387          
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: A0A7K8I244_9CORV (WRN helicase (Fragment) n=1 Tax=Aleadryas rufinucha TaxID=461220 RepID=A0A7K8I244_9CORV)

HSP 1 Score: 77.8 bits (190), Expect = 4.370e-12
Identity = 50/140 (35.71%), Postives = 75/140 (53.57%), Query Frame = 0
Query:    7 ATIQLA-AGSVVIIFHVLHGQRQSPDKLPQSLVGLLEDGSLAKTGVGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVDVGPRRGLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVAYLLFGRISELS 145
            A IQ+  A     +FHV      S    P+ L  LLED ++ K GVGI+GD  +L   F + +++ V+L  +A   K++      L  L  HL G+ L K Q +R S W    L++EQK YAA DAY  Y+++ ++  +S
Sbjct:  100 AVIQMCVAEDKCYLFHV-----SSMAGFPKGLKRLLEDETIKKVGVGIEGDQWKLMSDFEIKLKSFVELADVA-NEKLNCKETWSLNGLVKHLFGRQLLKDQSVRCSNWQEFPLNKEQKLYAATDAYAGYIVYEKLKNMS 233          
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: A0A8C8HBK4_ONCTS (DNA helicase n=2 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=A0A8C8HBK4_ONCTS)

HSP 1 Score: 78.2 bits (191), Expect = 5.030e-12
Identity = 52/117 (44.44%), Postives = 65/117 (55.56%), Query Frame = 0
Query:   32 KLPQSLVGLLEDGSLAKTGVGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVDVGPRRGLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVA-------YLLFGRI 141
            + P  L   LED ++ K GVGIKGD  +L   F V ++N V+L  LA  R +  G R  L  L  HL  K L KQQ +R S W+   LS+EQK YAA DAYV+       Y + GRI
Sbjct:  116 RFPTGLKIFLEDETIRKVGVGIKGDMWKLLSDFDVKLKNFVELGDLANGR-LRCGERWSLDGLVKHLFKKRLFKQQDVRCSNWDDFELSQEQKRYAATDAYVSGGKPTVSYCVIGRI 231          
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: D8PNN0_SCHCM (3'-5' exonuclease domain-containing protein (Fragment) n=1 Tax=Schizophyllum commune (strain H4-8 / FGSC 9210) TaxID=578458 RepID=D8PNN0_SCHCM)

HSP 1 Score: 77.8 bits (190), Expect = 5.380e-12
Identity = 60/148 (40.54%), Postives = 78/148 (52.70%), Query Frame = 0
Query:    4 NPPATIQLAAGSVVIIFHVLHGQRQSPDKLPQSLVGLLEDGSLAKTGVGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVD----VGPRR---GLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVAYLLFGRISEL 144
            N  A +Q+A G  +++  V   Q       P+ L  LLED S+AKTGVGI GD  +L R  G+ + NVVDL  +   R VD     GP     GLA L      + L K +  R S W    LS EQK YAA DA+ A++L+GR+  L
Sbjct:   76 NRVALVQVADGDHIVLVQVSQMQL-----FPEQLRLLLEDPSVAKTGVGISGDAQKLYRDHGISMSNVVDLGLMT--RSVDNANWKGPYSSPIGLARLIDFYEKRELRKGRISR-SNWEKVPLSDEQKQYAANDAHCAWVLYGRLRTL 215          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JET4_9PHAE3.540e-9964.313'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KEU8_9PHAE2.650e-5152.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRJ6_9PHAE1.650e-2737.553'-5' exonuclease domain-containing protein n=1 Ta... [more]
D7FIV1_ECTSI1.610e-1932.95Similar to Werner syndrome protein n=1 Tax=Ectocar... [more]
D7FIV2_ECTSI1.030e-1431.133'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A8C5V198_MICMU1.230e-1236.88DNA helicase n=8 Tax=Lemuriformes TaxID=376915 Rep... [more]
A0A7S0WQT4_9CHLO2.130e-1245.38Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
A0A7K8I244_9CORV4.370e-1235.71WRN helicase (Fragment) n=1 Tax=Aleadryas rufinuch... [more]
A0A8C8HBK4_ONCTS5.030e-1244.44DNA helicase n=2 Tax=Oncorhynchus tshawytscha TaxI... [more]
D8PNN0_SCHCM5.380e-1240.543'-5' exonuclease domain-containing protein (Fragm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..150
e-value: 1.7E-35
score: 123.9
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 9..142
e-value: 4.7E-13
score: 49.2
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 6..242
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 4..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:3444380..3445638 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1601.1mRNA_P-fluviatile_contig12.1601.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig12 3444380..3445640 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig12.1601.1 ID=prot_P-fluviatile_contig12.1601.1|Name=mRNA_P-fluviatile_contig12.1601.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=352bp
DPPNPPATIQLAAGSVVIIFHVLHGQRQSPDKLPQSLVGLLEDGSLAKTG
VGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVDVGPRRGLADLCLHLLG
KSLEKQQHLRLSRWNITALSREQKGYAARDAYVAYLLFGRISELSDPIFK
DAEELHIGDPVRLYTRGGNDCVGEGRIIAYGQETWGSTGILLAPRHATRG
HSRRWVVRISKVHVSLASTLYPDETAVPGTQPTAHVGDRVDQTLLWDAAR
MRKAAAGAGDGGRGATPVAAALIQDARPRSEQGAVSTAAEVSSATAAGFR
TPSEPFFAGQFSGIEALSAEVVSAMNAWVNHLDVRGVAPRSDTSGGGGEA
KG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR0025623'-5'_exonuclease_dom
IPR012337RNaseH-like_sf