mRNA_P-fluviatile_contig12.1601.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE) HSP 1 Score: 328 bits (840), Expect = 3.540e-99 Identity = 164/255 (64.31%), Postives = 190/255 (74.51%), Query Frame = 1
Query: 4 PPNPPATIQLAAGSVVIIFHVLHGQRQSPDKLPQSLVGLLEDGSLAKTGVGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVDVGPRRGLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVAYLLFGRISELSDPIFKDAEELHIGDPVRLYTRGGNDCVGEGRIIAYGQETWGSTGILLAPRHATRGHSRRWVVRISKVHVSLASTLYPDETAVPGTQPTAHVGDRVDQTLLWDAARMRKAAA 768
P NPPATIQLAAG V+IFHVLHGQR P +LP LV LLED L KTGVGIKGDCTRL F+GV+V + VDL SLA++RKV++G RRGLADLC+HLLG+ L K +RLS+WN LS +QK YAA DAY LL GRI ELSD IF+DAEELH+GD VRLYTR GNDCVGEG I+ + ETWG+TG L PR ATR +RRW VR+ +VHV A TLYPD T GT TA + RVD +LWDA+R+RK A
Sbjct: 268 PANPPATIQLAAGKRVVIFHVLHGQRSVPAELPDPLVDLLEDTKLTKTGVGIKGDCTRLTSFYGVEVAHAVDLRSLAVERKVELGLRRGLADLCVHLLGQQLPKDPTVRLSKWNKLDLSDDQKRYAALDAYACLLLHGRIGELSDSIFRDAEELHVGDRVRLYTRAGNDCVGEGCIVEHTDETWGTTGFYLVPRRATRRFARRWAVRLDRVHVPRAKTLYPDATDPRGTPATAQLASRVDSVILWDASRLRKTTA 522
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: A0A6H5KEU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU8_9PHAE) HSP 1 Score: 189 bits (481), Expect = 2.650e-51 Identity = 100/189 (52.91%), Postives = 123/189 (65.08%), Query Frame = 1
Query: 229 LALQRKVDVGPRRGLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVAYLLFGRISELSDPIFKDAEELHIGDPVRLYTRGGNDCVGEGRIIAYGQETWGSTGILLAPRHATRGHSRRWVVRISKVHVSLASTLYPDETAVPGTQPTAHVGDRVDQTLLWDAARMRKAAAGAGDGGRGA 795
+A++RKV++ RRGLADLC++LL K L K +RLS+WN LS +QK RI ELSD IF+DAEE+H+GD VRLYTR GNDCVGEG I+ + ETWG+TGI L PR ATRG +RRW V + +VHV A LYPD T G TA + RVD +LWDA+R+RK A G GA
Sbjct: 1 MAVERKVELWFRRGLADLCVNLLEKQLPKDPIVRLSKWNKLDLSDDQKR--------------RIGELSDSIFRDAEEMHVGDSVRLYTRAGNDCVGEGCIVEHTDETWGTTGIYLVPRRATRGFARRWAVHLDRVHVPRAKALYPDATDRRGDPATAQLASRVDSVILWDASRLRKMTATPSAGAAGA 175
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE) HSP 1 Score: 124 bits (311), Expect = 1.650e-27 Identity = 101/269 (37.55%), Postives = 136/269 (50.56%), Query Frame = 1
Query: 22 TIQLAA-GSVVIIFHVLHGQRQS-PDKLPQSLVGLLEDGSLAKTGVGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVDVGPRRGLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVAYLLFGRISELSDPIFKDA-EELHI-GDPVRLYTRGGNDCVGEGRIIAYGQ-----ETWGSTGILLAPRHATR-GHSRRWVVRISKVHVSLASTLYPDETAVPGT-----QPTA-------HVGDRVDQTLLWDAARMRKA 762
T+QLA +FH+ G R++ P +SL LL D ++ K GV +KGD +RLQR +GV+ +VDL S A VD+ P R LA + LGKSL K +R SRW+ L++ Q YA DAY A +L I + DPIF A ++ I G VRLYT CVG G++ E WG T + LA R TR G +R VV++ V V ++L P + A P QP H G + +LWD +R A
Sbjct: 110 TLQLALPDGTAYLFHLQRGTRRTRPSTFNRSLKVLLNDPTITKVGVAVKGDGSRLQRDYGVETCGMVDLRSYARTCWVDL-PCRSLAGMVATALGKSLSKNPSVRFSRWSQAELTQNQVNYACLDAYAAVVLHAEIGKSKDPIFCMAPSDIPIAGTEVRLYTNNHESCVGVGQVQDEEAARSLVEKWG-TDLKLAQREGTRSGGLKRVVVKV--VDVLKPASLTPHQDAPPXXXXXXGQPRVAVSMNDVHSGKGFEGFVLWDLVHVRLA 374
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: D7FIV1_ECTSI (Similar to Werner syndrome protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV1_ECTSI) HSP 1 Score: 100 bits (249), Expect = 1.610e-19 Identity = 85/258 (32.95%), Postives = 123/258 (47.67%), Query Frame = 1
Query: 7 PNPPATIQLAA-GSVVIIFHVLHGQRQSPDK-LPQSLVGLLEDGSLAKTGVGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVDVGPRRGLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVAYLLFGRISELSDPIFKDAE-ELHIGDPVRLYTRGGNDCVGEGRIIAYGQETWGSTGILLAPRHATRGHSRRWVVRISKVHVSLASTLY---PDETAVPG--TQPTAHVGDRVDQTLLWDAARMR 756
PNP +T+QL+ F + G +++ P++L LLE+ S+AK GV I D T L+R +G++V N VDL + A Q V+ P R LA + LLG+ L K +R SRW+ + LS Q+ +++ DPIF ELH G VRLY+ CVG G + +T P +G + VV +S V A T + P + G T A+ GDR+ +LWD A +R
Sbjct: 130 PNPVSTVQLSLPDGTAYCFQLQRGNKKTTSSNFPKALQNLLENPSIAKVGVNINSDATYLERDYGIEVANTVDLRTYARQCWVET-PSRSLAGMASSLLGRQLPKDPVIRSSRWS-SPLSDNQE----------------VAKFQDPIFSPPPVELHPGTKVRLYSNNHASCVGVGEV--QDDDTAAEALAGWFPGARRKGRLTQVVVGLSGVFKPAAYTAHKGTPSAASGVGRVTMDEAYKGDRL---VLWDVAHVR 364
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 1.030e-14 Identity = 80/257 (31.13%), Postives = 113/257 (43.97%), Query Frame = 1
Query: 7 PNPPATIQLAA-GSVVIIFHVLHGQRQSPDK-LPQSLVGLLEDGSLAKTGVGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVDVGPRRGLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVAYLLFGRISELSDPIFKDAEELHIGDPVRLYTRGGNDCVGEGRIIAYGQETWGSTGILLAPRHATRGHSRRWVVRISKVHVSLASTLY---PDETAVPG--TQPTAHVGDRVDQTLLWDAARMR 756
PNP +T+QL+ F + G +++ P++L LLE+ S+AK GV I D T L+R +G++V N VDL + A Q V+ P R LA + LLG+ L K +RLSRW+ S LSD D VRLY+ CVG G + +T P +G + VV +S V A T + P + G T A+ GDR+ +LWD A +R
Sbjct: 438 PNPVSTVQLSLPDGTAYCFQLQRGNKKTTSSNFPKALQNLLENPSIAKVGVNINSDATYLERDYGIEVANTVDLRTYARQCWVET-PSRSLAGMASSLLGRQLPKDPVIRLSRWS--------------------------SPLSD------------DQVRLYSNNHASCVGVGEV--QDDDTAAEALAGWFPGARRKGRLTQVVVGLSGVFKPAAYTAHKGAPRAASGVGRVTMDEAYKGDRL---VLWDVAHVR 650
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: A0A8C5V198_MICMU (DNA helicase n=8 Tax=Lemuriformes TaxID=376915 RepID=A0A8C5V198_MICMU) HSP 1 Score: 80.1 bits (196), Expect = 1.230e-12 Identity = 52/141 (36.88%), Postives = 77/141 (54.61%), Query Frame = 1
Query: 19 ATIQLAAG-SVVIIFHVLHGQRQSPDKLPQSLVGLLEDGSLAKTGVGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVDVGPRRGLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVAYLLFGRISELSD 438
A IQL S +FHV + PQ L LLE+ ++ K GVGI+GD +L R F + +++ V+L +A +K+ L L HLLGK L K + +R S W+ LS++QK YAA DAY +++ ++ L D
Sbjct: 99 ALIQLCVSESKCYLFHV-----SAASVFPQGLKNLLENEAIKKAGVGIEGDQWKLLRDFDIKLKSFVELTDVA-NKKLKCRETWSLNGLVKHLLGKQLLKDKSIRCSDWSNFPLSKDQKLYAATDAYAGLIIYRKLEILGD 233
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: A0A7S0WQT4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WQT4_9CHLO) HSP 1 Score: 79.0 bits (193), Expect = 2.130e-12 Identity = 54/119 (45.38%), Postives = 65/119 (54.62%), Query Frame = 1
Query: 70 HGQRQSPDK--LPQSLVGLLEDGSLAKTGVGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVDV------GPRRGLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVA 402
HGQ+ LP SLV LL D SL K GVGI+GDC RL R FGV V+ VDL +A D G GLA L LLG+ ++K Q + S W LS Q YAA+DA+V+
Sbjct: 271 HGQQPHAHARGLPPSLVRLLSDPSLIKAGVGIRGDCARLARDFGVTVRGAVDLRVVARAVAPDALVARTQGAGAGLAGLASALLGRVVDKAQ--QCSHWGREVLSGAQVAYAAQDAWVS 387
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: A0A7K8I244_9CORV (WRN helicase (Fragment) n=1 Tax=Aleadryas rufinucha TaxID=461220 RepID=A0A7K8I244_9CORV) HSP 1 Score: 77.8 bits (190), Expect = 4.370e-12 Identity = 50/140 (35.71%), Postives = 75/140 (53.57%), Query Frame = 1
Query: 19 ATIQLA-AGSVVIIFHVLHGQRQSPDKLPQSLVGLLEDGSLAKTGVGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVDVGPRRGLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVAYLLFGRISELS 435
A IQ+ A +FHV S P+ L LLED ++ K GVGI+GD +L F + +++ V+L +A K++ L L HL G+ L K Q +R S W L++EQK YAA DAY Y+++ ++ +S
Sbjct: 100 AVIQMCVAEDKCYLFHV-----SSMAGFPKGLKRLLEDETIKKVGVGIEGDQWKLMSDFEIKLKSFVELADVA-NEKLNCKETWSLNGLVKHLFGRQLLKDQSVRCSNWQEFPLNKEQKLYAATDAYAGYIVYEKLKNMS 233
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: A0A8C8HBK4_ONCTS (DNA helicase n=2 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=A0A8C8HBK4_ONCTS) HSP 1 Score: 78.2 bits (191), Expect = 5.030e-12 Identity = 52/117 (44.44%), Postives = 65/117 (55.56%), Query Frame = 1
Query: 94 KLPQSLVGLLEDGSLAKTGVGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVDVGPRRGLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVA-------YLLFGRI 423
+ P L LED ++ K GVGIKGD +L F V ++N V+L LA R + G R L L HL K L KQQ +R S W+ LS+EQK YAA DAYV+ Y + GRI
Sbjct: 116 RFPTGLKIFLEDETIRKVGVGIKGDMWKLLSDFDVKLKNFVELGDLANGR-LRCGERWSLDGLVKHLFKKRLFKQQDVRCSNWDDFELSQEQKRYAATDAYVSGGKPTVSYCVIGRI 231
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Match: D8PNN0_SCHCM (3'-5' exonuclease domain-containing protein (Fragment) n=1 Tax=Schizophyllum commune (strain H4-8 / FGSC 9210) TaxID=578458 RepID=D8PNN0_SCHCM) HSP 1 Score: 77.8 bits (190), Expect = 5.380e-12 Identity = 60/148 (40.54%), Postives = 78/148 (52.70%), Query Frame = 1
Query: 10 NPPATIQLAAGSVVIIFHVLHGQRQSPDKLPQSLVGLLEDGSLAKTGVGIKGDCTRLQRFFGVDVQNVVDLPSLALQRKVD----VGPRR---GLADLCLHLLGKSLEKQQHLRLSRWNITALSREQKGYAARDAYVAYLLFGRISEL 432
N A +Q+A G +++ V Q P+ L LLED S+AKTGVGI GD +L R G+ + NVVDL + R VD GP GLA L + L K + R S W LS EQK YAA DA+ A++L+GR+ L
Sbjct: 76 NRVALVQVADGDHIVLVQVSQMQL-----FPEQLRLLLEDPSVAKTGVGISGDAQKLYRDHGISMSNVVDLGLMT--RSVDNANWKGPYSSPIGLARLIDFYEKRELRKGRISR-SNWEKVPLSDEQKQYAANDAHCAWVLYGRLRTL 215 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1601.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1601.1 >prot_P-fluviatile_contig12.1601.1 ID=prot_P-fluviatile_contig12.1601.1|Name=mRNA_P-fluviatile_contig12.1601.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=352bp DPPNPPATIQLAAGSVVIIFHVLHGQRQSPDKLPQSLVGLLEDGSLAKTGback to top mRNA from alignment at P-fluviatile_contig12:3444380..3445640+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1601.1 ID=mRNA_P-fluviatile_contig12.1601.1|Name=mRNA_P-fluviatile_contig12.1601.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1261bp|location=Sequence derived from alignment at P-fluviatile_contig12:3444380..3445640+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:3444380..3445640+ >mRNA_P-fluviatile_contig12.1601.1 ID=mRNA_P-fluviatile_contig12.1601.1|Name=mRNA_P-fluviatile_contig12.1601.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2112bp|location=Sequence derived from alignment at P-fluviatile_contig12:3444380..3445640+ (Porterinema fluviatile SAG_2381)back to top |