prot_P-fluviatile_contig12.1521.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig12.1521.1
Unique Nameprot_P-fluviatile_contig12.1521.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length694
Homology
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BLAST of mRNA_P-fluviatile_contig12.1521.1 vs. uniprot
Match: D8LPX6_ECTSI (C2 NT-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX6_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 4.520e-33
Identity = 68/74 (91.89%), Postives = 70/74 (94.59%), Query Frame = 0 
Query:   51 SGLPPKLVSTTRSEWGQTMQVVITLFLDKRSGRFQDKEYKLRLVQAEKGHAIIMAPALATFTLDASLYAHLGAG 124
            SGLPPK+VST RSEW QTMQVVITLFLDKRSGRFQDKEYKLRLVQAE+G  IIMAPALATFTLDASLYAHLGAG
Sbjct:   12 SGLPPKVVSTARSEWEQTMQVVITLFLDKRSGRFQDKEYKLRLVQAEEGCTIIMAPALATFTLDASLYAHLGAG 85
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BLAST of mRNA_P-fluviatile_contig12.1521.1 vs. uniprot
Match: A0A6H5KJF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF2_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 4.690e-24
Identity = 140/291 (48.11%), Postives = 155/291 (53.26%), Query Frame = 0 
Query:  222 MSGSESRYSNVSSGSSAYSTPILRRPARHRPWSNEDDVAGFTASMRSRSSMRGSLQSKVGSKSFNDLDDSGH-----NSIA--SSKPGGPH-HRTLRSSLSFGGMLESMGGSSSGTGVGVGTHQSPGEQLALSGRRAAAXXXXXXXXXXXSPGTGMLTSAXXXXXXXXXXXXXXXXXXXXXTGSRVHSGDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRNRTGVQPGQGVAAATPAAVVPYDRTATVG------------YSRLLARFTKGPSPRPGRSRP 492
            MSGSESRYS  S+GSSA+STPILRR    + WSNED  +   AS+RSRS MR S++SK+GSKSFNDLDDS H       IA  SS  G  + HRT+RSSLSF G+L SMGGS                + ALSGRRA A           SPGTG+LTS                      +    HS  V      XXXXXXXXXX      XXXXXXXXXXXXXX     GV               PYDRT TVG            YSRLLARFTKGPSPR  R +P
Sbjct:    1 MSGSESRYSAGSAGSSAFSTPILRR--HRQSWSNEDIESA--ASIRSRSRMRRSMRSKLGSKSFNDLDDSVHLTSPGKRIARFSSSEGTTYGHRTVRSSLSFRGLLGSMGGSXXXXXXXXXXXXXXXXRSALSGRRAVAVQTAAAHVTA-SPGTGVLTSE---------------------SSCSTHSFAVPAEKRSXXXXXXXXXXGEKDGRXXXXXXXXXXXXXXXXXXXGV---------------PYDRTTTVGGEGREEKITVLGYSRLLARFTKGPSPRGDRQKP 250
[Close]
BLAST of mRNA_P-fluviatile_contig12.1521.1 vs. uniprot
Match: D8LPX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX7_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 1.150e-11
Identity = 57/115 (49.57%), Postives = 68/115 (59.13%), Query Frame = 0 
Query:  266 MRSRSSMRGSLQSKVGSKSFNDLDDSGH-------NSIASSKPGGPH-HRTLRSSLSFGGMLESMGGSSSGTGVGVGTHQSPGEQLALSGRRAAAXXXXXXXXXXXSPGTGMLTS 372
            MRSRS MR S+++K+GSKSFNDLDDS H       ++  SS  G  + HR +RSSLSFGG+L SMGGSS               + ALSGRRA A           SPGTG+LTS
Sbjct:    1 MRSRSRMRRSMRAKLGSKSFNDLDDSVHLISPGKRSARFSSSEGTTYGHRAVRSSLSFGGLLGSMGGSSXXXXXXXXXXXXXXHRSALSGRRAVAVQTAAAHVTA-SPGTGVLTS 114
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LPX6_ECTSI4.520e-3391.89C2 NT-type domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5KJF2_9PHAE4.690e-2448.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPX7_ECTSI1.150e-1149.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019448NT-type C2 domainPFAMPF10358NT-C2coord: 17..125
e-value: 8.0E-6
score: 25.6
IPR019448NT-type C2 domainPROSITEPS51840C2_NTcoord: 8..155
score: 18.197
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..694
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:2642132..2654189 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1521.1mRNA_P-fluviatile_contig12.1521.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig12 2642132..2654189 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig12.1521.1 ID=prot_P-fluviatile_contig12.1521.1|Name=mRNA_P-fluviatile_contig12.1521.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=694bp
MASFLRKAARMNLVAMDFVLQVTVVELVLGSLDGGRTLSFELSRRTKAST
SGLPPKLVSTTRSEWGQTMQVVITLFLDKRSGRFQDKEYKLRLVQAEKGH
AIIMAPALATFTLDASLYAHLGAGPSVEQPVDLYAPKLNGPGGFATVHLR
VRCCETGGGRTPLRGRSVSVPNVNSSSAPLQTRLSPRSSRAATNRPGMPL
PLTSSSVGPGGLLVGSSFGFSMSGSESRYSNVSSGSSAYSTPILRRPARH
RPWSNEDDVAGFTASMRSRSSMRGSLQSKVGSKSFNDLDDSGHNSIASSK
PGGPHHRTLRSSLSFGGMLESMGGSSSGTGVGVGTHQSPGEQLALSGRRA
AAAAAAAASAAVGSPGTGMLTSASPSSTSSSSMAAGRRSGSSGGTGSRVH
SGDVGGVGGRGSSSGSCGEANSRNNVGVTGSGGSGGDGGGGRNRTGVQPG
QGVAAATPAAVVPYDRTATVGYSRLLARFTKGPSPRPGRSRPPPPLADRF
AVSAAASRELGSGSTTSTMGSQNNFGSSGGGGGGGGIGIGGGGFNTNNKR
RVFGFKSNAARSAASAAAIAPAPSLRQLTKHPGGGADDGGSGGSGDGSGV
GHGGGGAGGGSSSNNPTAPSSAFSSPPEALQQLLLPADPAGGATLTTVPT
TTAAATDDEPRPPTAATVPRRKSPSLPLSSLLPLSSSTTEHGRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019448NT-C2