mRNA_P-fluviatile_contig12.1521.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1521.1 vs. uniprot
Match: D8LPX6_ECTSI (C2 NT-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX6_ECTSI) HSP 1 Score: 132 bits (331), Expect = 4.520e-33 Identity = 68/74 (91.89%), Postives = 70/74 (94.59%), Query Frame = 1
Query: 151 SGLPPKLVSTTRSEWGQTMQVVITLFLDKRSGRFQDKEYKLRLVQAEKGHAIIMAPALATFTLDASLYAHLGAG 372
SGLPPK+VST RSEW QTMQVVITLFLDKRSGRFQDKEYKLRLVQAE+G IIMAPALATFTLDASLYAHLGAG
Sbjct: 12 SGLPPKVVSTARSEWEQTMQVVITLFLDKRSGRFQDKEYKLRLVQAEEGCTIIMAPALATFTLDASLYAHLGAG 85
BLAST of mRNA_P-fluviatile_contig12.1521.1 vs. uniprot
Match: A0A6H5KJF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF2_9PHAE) HSP 1 Score: 119 bits (297), Expect = 4.690e-24 Identity = 140/291 (48.11%), Postives = 155/291 (53.26%), Query Frame = 1
Query: 664 MSGSESRYSNVSSGSSAYSTPILRRPARHRPWSNEDDVAGFTASMRSRSSMRGSLQSKVGSKSFNDLDDSGH-----NSIA--SSKPGGPH-HRTLRSSLSFGGMLESMGGSSSGTGVGVGTHQSPGEQLALSGRRAAAXXXXXXXXXXXSPGTGMLTSAXXXXXXXXXXXXXXXXXXXXXTGSRVHSGDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRNRTGVQPGQGVAAATPAAVVPYDRTATVG------------YSRLLARFTKGPSPRPGRSRP 1476
MSGSESRYS S+GSSA+STPILRR + WSNED + AS+RSRS MR S++SK+GSKSFNDLDDS H IA SS G + HRT+RSSLSF G+L SMGGS + ALSGRRA A SPGTG+LTS + HS V XXXXXXXXXX XXXXXXXXXXXXXX GV PYDRT TVG YSRLLARFTKGPSPR R +P
Sbjct: 1 MSGSESRYSAGSAGSSAFSTPILRR--HRQSWSNEDIESA--ASIRSRSRMRRSMRSKLGSKSFNDLDDSVHLTSPGKRIARFSSSEGTTYGHRTVRSSLSFRGLLGSMGGSXXXXXXXXXXXXXXXXRSALSGRRAVAVQTAAAHVTA-SPGTGVLTSE---------------------SSCSTHSFAVPAEKRSXXXXXXXXXXGEKDGRXXXXXXXXXXXXXXXXXXXGV---------------PYDRTTTVGGEGREEKITVLGYSRLLARFTKGPSPRGDRQKP 250
BLAST of mRNA_P-fluviatile_contig12.1521.1 vs. uniprot
Match: D8LPX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX7_ECTSI) HSP 1 Score: 75.1 bits (183), Expect = 1.150e-11 Identity = 57/115 (49.57%), Postives = 68/115 (59.13%), Query Frame = 1
Query: 796 MRSRSSMRGSLQSKVGSKSFNDLDDSGH-------NSIASSKPGGPH-HRTLRSSLSFGGMLESMGGSSSGTGVGVGTHQSPGEQLALSGRRAAAXXXXXXXXXXXSPGTGMLTS 1116
MRSRS MR S+++K+GSKSFNDLDDS H ++ SS G + HR +RSSLSFGG+L SMGGSS + ALSGRRA A SPGTG+LTS
Sbjct: 1 MRSRSRMRRSMRAKLGSKSFNDLDDSVHLISPGKRSARFSSSEGTTYGHRAVRSSLSFGGLLGSMGGSSXXXXXXXXXXXXXXHRSALSGRRAVAVQTAAAHVTA-SPGTGVLTS 114 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1521.1 >prot_P-fluviatile_contig12.1521.1 ID=prot_P-fluviatile_contig12.1521.1|Name=mRNA_P-fluviatile_contig12.1521.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=694bp MASFLRKAARMNLVAMDFVLQVTVVELVLGSLDGGRTLSFELSRRTKASTback to top mRNA from alignment at P-fluviatile_contig12:2642132..2654189+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1521.1 ID=mRNA_P-fluviatile_contig12.1521.1|Name=mRNA_P-fluviatile_contig12.1521.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=12058bp|location=Sequence derived from alignment at P-fluviatile_contig12:2642132..2654189+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:2642132..2654189+ >mRNA_P-fluviatile_contig12.1521.1 ID=mRNA_P-fluviatile_contig12.1521.1|Name=mRNA_P-fluviatile_contig12.1521.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4164bp|location=Sequence derived from alignment at P-fluviatile_contig12:2642132..2654189+ (Porterinema fluviatile SAG_2381)back to top |