prot_P-fluviatile_contig12.1473.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig12.1473.1
Unique Nameprot_P-fluviatile_contig12.1473.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length935
Homology
BLAST of mRNA_P-fluviatile_contig12.1473.1 vs. uniprot
Match: D8LQ17_ECTSI (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ17_ECTSI)

HSP 1 Score: 584 bits (1505), Expect = 6.450e-191
Identity = 446/912 (48.90%), Postives = 492/912 (53.95%), Query Frame = 0
Query:   35 RAITFDPEGQNMYCASPSGLRRWSWDNDTASARLEAMGDVPWGKVGAGALHFNADGQQLLAASCAGSRVSVWAVDSDADHPLPSRPXXXXXXXXXXXXXXGAFGADTAMAHIEAASVPPXXXXXXXXXXXXXXXXXGGKEATAGKPPDPLSSNVTRAYDADAKSVSSRSSGQSRSSERAGRDEWHHNRDSKPAAQEKKRDASPIGGGNGGG----------VGL-AFEVLGRQLPLLPTAAERKLSSSPPGNAPATAASPMPNPMVTAAPGADSNTAATXXXXXXXXXXXXASVVAYGSSSVANVMXXXXXXXXXXXXXXXXXXXXXXXXXXDDAVASVSSSGRHRSIGTSISDTLVVAAHPAANGTAGLAGSRYRASAAGAWPEPAPGKHDGSNV-EDHGRDVAAALGIEAGGDRHGLLGGGSRRQGDGLAALTVGKVNVDYKWHKRVAEGFTGVDDAVDKDKQGERRMYSSGSGGGDGRNKDKSTAEASEDRMAGRRGEEGGSEGRTTASEMAVDVGATAGKLPCPWWQDSQGGFVGRGXXXXXXXXXXXXXXXEDSPPLLGSPEPARTAQLAQLTSPLTHEAKPPHLLPSSSRRSPEISRQRRPPDAVVGQSSPVGFPVRVAGTSSNHGGASAAAALSIFVSPEVRETEAIGPSAAAAAFDGLDDGDIFSKAGRSDGGXXXXXXXXXXXXXXXXXXXXXXXELGMTRPRTATRRWDRPGPPGDDEIIGKILLSRASVTSMLSSRLTHLRMLRYGWADGDVSGTISKLARLERSVTPTDDSPRAVVADFLWVVPLDGTRVTLEHCLELMPLLEGLWKLDTESCVAAATRCLESIVRRFGGFVRDTLGASVSAGGVDLAREDRIARCREAHRAFIRGYHHLERSEGEFYEDRRIAAVAGRLRPLFESYFMS 934
            RAITFDP+GQ MYCASPSGLRRWSWDNDTASARLEAMGDVPWGKVGAGALH+NADGQQ                         SRP                   +T  A                                                              SR  +R+      H+RDSKP  +   ++AS  GG +G             G+ AF+VLGRQ+ LLPTAAE K+ SS          SP+  P  T                    XXXX+ V   G SS                     XXXXXXXXX DDAVASV+ S RHRS+GTSISDTLV+A    A+     AG R    AA  W EPAPGK DG N   D GR VAAALG+ A GDRH L  GG RR               + KWHKRVA  F GV+   D +K  ERR  S G G G G+N+ K TA+  E R           +G   A+   V  G T      PW +DS+    GR                +DSPPLLGSPEPA  A     ++P   + +PP   PSSSRRSP+  + R    AVV +SS VGFP+  A  S                                               G    G        XXXXXXXXXXXXXX ELGMTRPRTATRRWDRPGPPGDDE+I K LLSRA+ TS LS+RLTHLRMLRYGWADGDVSGTISKL RLERS T  DDSPR VVADFLWVVPLDGTRVTL+HCLELMPLLEGLWKLD  SCVAAATRCLESIVRRFGGF+RDTL A V+AG VDLAREDRIARCREAHRAFIRGYHHLERSEGEFYEDRRIAAVA RLRPLFESYFMS
Sbjct:  240 RAITFDPDGQKMYCASPSGLRRWSWDNDTASARLEAMGDVPWGKVGAGALHYNADGQQQ------------------------SRPSR----------------GNTFPA--------------------------------------------------------------SRDGQRS------HSRDSKPTME---KEAS--GGDDGSXXXXCXXXXXXAGMPAFQVLGRQVVLLPTAAEEKVRSS----------SPLGGPAAT-------------------PXXXXSGVTVGGPSSAVGGRLQNRHAARAEAVAATVXXXXXXXXXTDDAVASVAGSIRHRSVGTSISDTLVIADGGTADQADDRAGGREHRPAA--WSEPAPGKDDGGNYGRDSGRGVAAALGVVAAGDRHRL--GGERRXXXXXXXXXD-----ECKWHKRVAGAFAGVEGTADDEKGVERRGDSGGDGSG-GKNRGKRTADEKEARRE--------EDGTDRAANAGVSSGVTPRFTVNPWPKDSRVEAGGR-------IRTEVPGGGQDSPPLLGSPEPAPAAA----SNPARSKNEPPSF-PSSSRRSPDRPQPREKTHAVVTRSSAVGFPITTADGSXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEPEGLSVADIFGXXXXXXXXXXXXXXDELGMTRPRTATRRWDRPGPPGDDEVIAKTLLSRATATSTLSNRLTHLRMLRYGWADGDVSGTISKLTRLERSATVADDSPRTVVADFLWVVPLDGTRVTLDHCLELMPLLEGLWKLDAGSCVAAATRCLESIVRRFGGFIRDTLAAPVAAGRVDLAREDRIARCREAHRAFIRGYHHLERSEGEFYEDRRIAAVAERLRPLFESYFMS 972          
BLAST of mRNA_P-fluviatile_contig12.1473.1 vs. uniprot
Match: A0A6H5K3J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J5_9PHAE)

HSP 1 Score: 489 bits (1258), Expect = 1.710e-154
Identity = 410/895 (45.81%), Postives = 461/895 (51.51%), Query Frame = 0
Query:   35 RAITFDPEGQNMYCASPSGLRRWSWDNDTASARLEAMGDVPWGKVGAGALHFNADGQQLLAASCAGSRVSVWAVDSDADHPLPSRPXXXXXXXXXXXXXXGAFGADTAMAHIEAASVPPXXXXXXXXXXXXXXXXXGGKEATAGKPPDPLSSNVTRAY-DADAKSVSSRSS-GQSRSSERAGRDEWHHNRDSKPAAQEKKRDASPIGGGNGGGVGL-----------AFEVLGRQLPLLPTAAERKLSSSPPGNAPATAASPMPNPMVTAAPGADSNTAATXXXXXXXXXXXXASVVAYGSSSVANVMXXXXXXXXXXXXXXXXXXXXXXXXXXDDAVASVSSSGRHRSIGTSISDTLVVAAHPAANGTAGLAGSRYRASAAGAWPEPAPGKHDGSN-VEDHGRDVAAALGIEAGGDRHGLLGGGSRRQGDGLAALTVGKVNVDY-KWHKRVAEGFTGVDDAVDKDKQGERRMYSSGSGGGDGRNKDKSTAEASEDRMAGRRGEEGGSEGRTTASEMAVDVGATAGKLPCPWWQDSQGGFVGRGXXXXXXXXXXXXXXXEDSPPLLGSPEPARTAQLAQLTSPLTHEAKPPHLLPSSSRRSPEISRQRRPPDAVVGQSSPVGFPVRVAGTSSNHGGASAAAALSIFVSPEVRETEAI---------GPSAAAAAFDGLDDGDIFSKAGRSDGGXXXXXXXXXXXXXXXXXXXXXXXELGMTRPRTATRRWDRPGPPGDDEIIGKILLSRASVTSMLSSRLTHLRMLRYGWADGDVSGTISKLARLERSVTPTDDSPRAVVADFLWVVPLDGTRVTLEHCLELMPLLEGLWKLD----------TESCVAAATRCLESIVRRFGGFVRDTLGASVSAGGVDLAREDRIARCREAHR 895
            RAITFDP+GQ MYCASPSGLRRWSWDN  ASA+LEAMGDVPWGKVGAGALH+NADGQQ       G  +   A +S A    P+R                  GA T                                      P DP  S   R Y DADAK   SR S G +  + R G  +  H+RDSKP  +   ++AS  GG +G                AF+VLGRQ+ LLPTAAE K   S P                               XXXXXXXXXX      G +S                  XXXXXXXXXXXX DDAVASV+ S RHRS+GTSISDTLV+A    A+     AG R    AA  W EPAPGK DG N V D GR VAAALG+ A GDRH L   G RR        T G  + D  KWHKRVA  F GV+   D +K  ERR  S G G G G+ + K  A+  E R  G        +G   A+ + V  G T+     PW +DS     GR                EDSPPLLGSPEPA  A     ++P     +PP   PSSSRRSP+  +     D VV +SS VGFP+  A  S + G                               GP       +GL   DIF   G   GG                       ELGMTRPRTATRRWDRPGPPG+DE+I K LLSRA+ TS LS+R        YGWADGDVSGTISKL RLERS T  DDSPR VVADFLWVVPLDGTRVTL+HCLELMPLLEGLWK+           T  CVAAATRCLESIVRRFGGF+RDTL A V+AG VDLAREDR+ARCREAHR
Sbjct:  219 RAITFDPDGQKMYCASPSGLRRWSWDNHIASAQLEAMGDVPWGKVGAGALHYNADGQQ-------GRNLGA-ASESSAPLDTPAR------------------GATTTATE---------------------------------SPSDPSLSTTDREYGDADAKVPESRPSRGNTFPASRDG--QRSHSRDSKPTME---KEAS--GGDDGSXXXXXXXXXXXXXMPAFQVLGRQVVLLPTAAEEKAKPSSPXX-----------------------------XXXXXXXXXXXXXXVGGPASAGGGRIQNRHAARAEAVAXXXXXXXXXXXXTDDAVASVAGSIRHRSVGTSISDTLVIADGCTADQADDRAGGREHRPAA--WSEPAPGKDDGGNYVRDCGRGVAAALGVVAAGDRHRLS--GERR-------ATGGADDGDECKWHKRVAGAFAGVEGTADDEKGMERRDDSGGDGSG-GKTRGKGNADEKEARREG--------DGTDRAANVGVPSGVTSRMTVDPWPKDSWVEAEGRNRAGVPGGG-------EDSPPLLGSPEPAPAAA----SNPARSMNEPPSF-PSSSRRSPDRPQPSDKTDTVVTRSSAVGFPITTADGSISGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGPEP-----EGLSVADIFGDGGGDCGGGGSD-------------------ELGMTRPRTATRRWDRPGPPGEDEVIAKTLLSRATATSTLSNR--------YGWADGDVSGTISKLTRLERSATVADDSPRTVVADFLWVVPLDGTRVTLDHCLELMPLLEGLWKVAETPACLPSFLTTRCVAAATRCLESIVRRFGGFIRDTLTAPVAAGRVDLAREDRVARCREAHR 954          
BLAST of mRNA_P-fluviatile_contig12.1473.1 vs. uniprot
Match: A0A7S4B3B9_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B3B9_CHRCT)

HSP 1 Score: 84.0 bits (206), Expect = 1.700e-13
Identity = 53/152 (34.87%), Postives = 78/152 (51.32%), Query Frame = 0
Query:  746 PGDDEIIGKILLSRASVTSMLSSRLTHLRMLRYGWADGDVSGTISKLARLERSVTPTDDSPRAVVADFLWVVPLDGTRVTLEHCLELMPLLEGLWKLDTESCVAAATRCLESIVRRFGGFVRDTLGASVSAGGVDLAREDRIARCREAHRAF 897
            P DD ++  +L   A   S+L++RLT LR+L   WA GDV   +S+L +L +S      +P A+  D L   PL  T + L   L L+PLL+ L     E    A+   L  ++R FG  +  T  ++    GVDL+ E R  RC+E +  F
Sbjct:  174 PRDDLLLRDLLGGSAMQVSVLTNRLTALRVLSRFWAAGDVKQMLSQLLQLHQS------NP-AITVDVLRAGPLQNTTLDLVDALTLLPLLQSLLASQFEEYTVASIEALAMLLRSFGSLIATTYHSAHEGVGVDLSMETRYERCKECYTLF 318          
BLAST of mRNA_P-fluviatile_contig12.1473.1 vs. uniprot
Match: A0A061QZZ4_9CHLO (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QZZ4_9CHLO)

HSP 1 Score: 71.2 bits (173), Expect = 6.660e-9
Identity = 44/147 (29.93%), Postives = 76/147 (51.70%), Query Frame = 0
Query:  750 EIIGKILLSRASVTSMLSSRLTHLRMLRYGWADGDVSGTISKLARLERSVTPTDDSPRAVVADFLWVVPLDGTRVTLEHCLELMPLLEGLWKLDTESCVAAATRCLESIVRRFGGFVRDTLGASVSAGGVDLAREDRIARCREAHRA 896
            E++ ++L    ++ ++LS+R ++L+++R  WA GDV G ++ L R +          ++V AD L VV        LEHC E++P+L+ L     +     A     ++++ +G  +R T  A VS  G D+A E R  +C  A  A
Sbjct:  518 EVLSELLGKHPTMLAVLSTRSSNLQVVRGLWAKGDVRGALAALKRCQ---------DQSVAADLLGVVGKQQDAFKLEHCGEVLPILDDLLASTHDQWQLVAAETCANLLKSYGQIIRSTFSA-VSGIGPDMAMEARREKCTNAKNA 654          
BLAST of mRNA_P-fluviatile_contig12.1473.1 vs. uniprot
Match: A0A4P9WKN7_9FUNG (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WKN7_9FUNG)

HSP 1 Score: 68.2 bits (165), Expect = 5.570e-8
Identity = 45/147 (30.61%), Postives = 68/147 (46.26%), Query Frame = 0
Query:  753 GKILLSRASVTSMLSSRLTHLRMLRYGWADGDVSGTISKLARLERSVTPTDDSPRAVVADFLWVVPLDGTRVTLEHCLELMPLLEGLWKLDTESCVAAATRCLESIVRRFGGFVRDTLGASVSAG-GVDLAREDRIARCREAHRAFI 898
            G +      +T++L +RL  LR +R  W +G++   +  +               AV  D L VV L     TLE C  ++P+L  L     E  +A A      + + F   +   L +S +   GVDL REDRIARC+  HR+F+
Sbjct:  448 GSLTQHTTQITNVLLTRLAMLRTVRAAWDEGNIRPALEAMIEC---------GDAAVRVDVLRVVNLRPKLWTLEGCALVLPMLVELLFEVYEDYIATACATTRVLCKSFAPMILSALDSSATVSPGVDLVREDRIARCKACHRSFV 585          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LQ17_ECTSI6.450e-19148.90Katanin p80 WD40 repeat-containing subunit B1 homo... [more]
A0A6H5K3J5_9PHAE1.710e-15445.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4B3B9_CHRCT1.700e-1334.87Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A061QZZ4_9CHLO6.660e-929.93Katanin p80 WD40 repeat-containing subunit B1 homo... [more]
A0A4P9WKN7_9FUNG5.570e-830.61Katanin p80 WD40 repeat-containing subunit B1 homo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028021Katanin p80 subunit, C-terminalPFAMPF13925Katanin_con80coord: 760..897
e-value: 2.0E-21
score: 76.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 21..152
e-value: 5.6E-6
score: 27.8
NoneNo IPR availablePANTHERPTHR19845:SF0KATANIN P80 WD40 REPEAT-CONTAINING SUBUNIT B1coord: 35..133
NoneNo IPR availablePANTHERPTHR19845KATANIN P80 SUBUNITcoord: 35..133
NoneNo IPR availablePANTHERPTHR19845:SF0KATANIN P80 WD40 REPEAT-CONTAINING SUBUNIT B1coord: 747..897
NoneNo IPR availablePANTHERPTHR19845KATANIN P80 SUBUNITcoord: 747..897
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..934
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.76
NoneNo IPR availableSUPERFAMILY750113-carboxy-cis,cis-mucoante lactonizing enzymecoord: 34..118
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:2113625..2120671 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1473.1mRNA_P-fluviatile_contig12.1473.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig12 2110038..2120671 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig12.1473.1 ID=prot_P-fluviatile_contig12.1473.1|Name=mRNA_P-fluviatile_contig12.1473.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=935bp
MMMMMVVVVLVMLLVLLPTPVQLPVLLPLAAPRHRAITFDPEGQNMYCAS
PSGLRRWSWDNDTASARLEAMGDVPWGKVGAGALHFNADGQQLLAASCAG
SRVSVWAVDSDADHPLPSRPPPPEQQQQEQEETGGAFGADTAMAHIEAAS
VPPLAAAGSAASSPPDSPPQGGKEATAGKPPDPLSSNVTRAYDADAKSVS
SRSSGQSRSSERAGRDEWHHNRDSKPAAQEKKRDASPIGGGNGGGVGLAF
EVLGRQLPLLPTAAERKLSSSPPGNAPATAASPMPNPMVTAAPGADSNTA
ATASAASAAAAKNPASVVAYGSSSVANVMLNNRRSSRAAAVAATVAAVAS
AKAATDDAVASVSSSGRHRSIGTSISDTLVVAAHPAANGTAGLAGSRYRA
SAAGAWPEPAPGKHDGSNVEDHGRDVAAALGIEAGGDRHGLLGGGSRRQG
DGLAALTVGKVNVDYKWHKRVAEGFTGVDDAVDKDKQGERRMYSSGSGGG
DGRNKDKSTAEASEDRMAGRRGEEGGSEGRTTASEMAVDVGATAGKLPCP
WWQDSQGGFVGRGGEGGRAGEGEGDGGGEDSPPLLGSPEPARTAQLAQLT
SPLTHEAKPPHLLPSSSRRSPEISRQRRPPDAVVGQSSPVGFPVRVAGTS
SNHGGASAAAALSIFVSPEVRETEAIGPSAAAAAFDGLDDGDIFSKAGRS
DGGGGDGDGSGGGGVGGGGVGGGGAGELGMTRPRTATRRWDRPGPPGDDE
IIGKILLSRASVTSMLSSRLTHLRMLRYGWADGDVSGTISKLARLERSVT
PTDDSPRAVVADFLWVVPLDGTRVTLEHCLELMPLLEGLWKLDTESCVAA
ATRCLESIVRRFGGFVRDTLGASVSAGGVDLAREDRIARCREAHRAFIRG
YHHLERSEGEFYEDRRIAAVAGRLRPLFESYFMS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028021Katanin_C-terminal
IPR015943WD40/YVTN_repeat-like_dom_sf