|
|
Homology
BLAST of mRNA_P-fluviatile_contig12.1473.1 vs. uniprot
Match: D8LQ17_ECTSI (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ17_ECTSI) HSP 1 Score: 584 bits (1505), Expect = 3.250e-186 Identity = 446/912 (48.90%), Postives = 492/912 (53.95%), Query Frame = 3
Query: 1287 RAITFDPEGQNMYCASPSGLRRWSWDNDTASARLEAMGDVPWGKVGAGALHFNADGQQLLAASCAGSRVSVWAVDSDADHPLPSRPXXXXXXXXXXXXXXGAFGADTAMAHIEAASVPPXXXXXXXXXXXXXXXXXGGKEATAGKPPDPLSSNVTRAYDADAKSVSSRSSGQSRSSERAGRDEWHHNRDSKPAAQEKKRDASPIGGGNGGG----------VGL-AFEVLGRQLPLLPTAAERKLSSSPPGNAPATAASPMPNPMVTAAPGADSNTAATXXXXXXXXXXXXASVVAYGSSSVANVMXXXXXXXXXXXXXXXXXXXXXXXXXXDDAVASVSSSGRHRSIGTSISDTLVVAAHPAANGTAGLAGSRYRASAAGAWPEPAPGKHDGSNV-EDHGRDVAAALGIEAGGDRHGLLGGGSRRQGDGLAALTVGKVNVDYKWHKRVAEGFTGVDDAVDKDKQGERRMYSSGSGGGDGRNKDKSTAEASEDRMAGRRGEEGGSEGRTTASEMAVDVGATAGKLPCPWWQDSQGGFVGRGXXXXXXXXXXXXXXXEDSPPLLGSPEPARTAQLAQLTSPLTHEAKPPHLLPSSSRRSPEISRQRRPPDAVVGQSSPVGFPVRVAGTSSNHGGASAAAALSIFVSPEVRETEAIGPSAAAAAFDGLDDGDIFSKAGRSDGGXXXXXXXXXXXXXXXXXXXXXXXELGMTRPRTATRRWDRPGPPGDDEIIGKILLSRASVTSMLSSRLTHLRMLRYGWADGDVSGTISKLARLERSVTPTDDSPRAVVADFLWVVPLDGTRVTLEHCLELMPLLEGLWKLDTESCVAAATRCLESIVRRFGGFVRDTLGASVSAGGVDLAREDRIARCREAHRAFIRGYHHLERSEGEFYEDRRIAAVAGRLRPLFESYFMS 3986
RAITFDP+GQ MYCASPSGLRRWSWDNDTASARLEAMGDVPWGKVGAGALH+NADGQQ SRP +T A SR +R+ H+RDSKP + ++AS GG +G G+ AF+VLGRQ+ LLPTAAE K+ SS SP+ P T XXXX+ V G SS XXXXXXXXX DDAVASV+ S RHRS+GTSISDTLV+A A+ AG R AA W EPAPGK DG N D GR VAAALG+ A GDRH L GG RR + KWHKRVA F GV+ D +K ERR S G G G G+N+ K TA+ E R +G A+ V G T PW +DS+ GR +DSPPLLGSPEPA A ++P + +PP PSSSRRSP+ + R AVV +SS VGFP+ A S G G XXXXXXXXXXXXXX ELGMTRPRTATRRWDRPGPPGDDE+I K LLSRA+ TS LS+RLTHLRMLRYGWADGDVSGTISKL RLERS T DDSPR VVADFLWVVPLDGTRVTL+HCLELMPLLEGLWKLD SCVAAATRCLESIVRRFGGF+RDTL A V+AG VDLAREDRIARCREAHRAFIRGYHHLERSEGEFYEDRRIAAVA RLRPLFESYFMS
Sbjct: 240 RAITFDPDGQKMYCASPSGLRRWSWDNDTASARLEAMGDVPWGKVGAGALHYNADGQQQ------------------------SRPSR----------------GNTFPA--------------------------------------------------------------SRDGQRS------HSRDSKPTME---KEAS--GGDDGSXXXXCXXXXXXAGMPAFQVLGRQVVLLPTAAEEKVRSS----------SPLGGPAAT-------------------PXXXXSGVTVGGPSSAVGGRLQNRHAARAEAVAATVXXXXXXXXXTDDAVASVAGSIRHRSVGTSISDTLVIADGGTADQADDRAGGREHRPAA--WSEPAPGKDDGGNYGRDSGRGVAAALGVVAAGDRHRL--GGERRXXXXXXXXXD-----ECKWHKRVAGAFAGVEGTADDEKGVERRGDSGGDGSG-GKNRGKRTADEKEARRE--------EDGTDRAANAGVSSGVTPRFTVNPWPKDSRVEAGGR-------IRTEVPGGGQDSPPLLGSPEPAPAAA----SNPARSKNEPPSF-PSSSRRSPDRPQPREKTHAVVTRSSAVGFPITTADGSXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEPEGLSVADIFGXXXXXXXXXXXXXXDELGMTRPRTATRRWDRPGPPGDDEVIAKTLLSRATATSTLSNRLTHLRMLRYGWADGDVSGTISKLTRLERSATVADDSPRTVVADFLWVVPLDGTRVTLDHCLELMPLLEGLWKLDAGSCVAAATRCLESIVRRFGGFIRDTLAAPVAAGRVDLAREDRIARCREAHRAFIRGYHHLERSEGEFYEDRRIAAVAERLRPLFESYFMS 972
BLAST of mRNA_P-fluviatile_contig12.1473.1 vs. uniprot
Match: A0A6H5K3J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J5_9PHAE) HSP 1 Score: 489 bits (1258), Expect = 2.330e-150 Identity = 410/895 (45.81%), Postives = 461/895 (51.51%), Query Frame = 3
Query: 1287 RAITFDPEGQNMYCASPSGLRRWSWDNDTASARLEAMGDVPWGKVGAGALHFNADGQQLLAASCAGSRVSVWAVDSDADHPLPSRPXXXXXXXXXXXXXXGAFGADTAMAHIEAASVPPXXXXXXXXXXXXXXXXXGGKEATAGKPPDPLSSNVTRAY-DADAKSVSSRSS-GQSRSSERAGRDEWHHNRDSKPAAQEKKRDASPIGGGNGGGVGL-----------AFEVLGRQLPLLPTAAERKLSSSPPGNAPATAASPMPNPMVTAAPGADSNTAATXXXXXXXXXXXXASVVAYGSSSVANVMXXXXXXXXXXXXXXXXXXXXXXXXXXDDAVASVSSSGRHRSIGTSISDTLVVAAHPAANGTAGLAGSRYRASAAGAWPEPAPGKHDGSN-VEDHGRDVAAALGIEAGGDRHGLLGGGSRRQGDGLAALTVGKVNVDY-KWHKRVAEGFTGVDDAVDKDKQGERRMYSSGSGGGDGRNKDKSTAEASEDRMAGRRGEEGGSEGRTTASEMAVDVGATAGKLPCPWWQDSQGGFVGRGXXXXXXXXXXXXXXXEDSPPLLGSPEPARTAQLAQLTSPLTHEAKPPHLLPSSSRRSPEISRQRRPPDAVVGQSSPVGFPVRVAGTSSNHGGASAAAALSIFVSPEVRETEAI---------GPSAAAAAFDGLDDGDIFSKAGRSDGGXXXXXXXXXXXXXXXXXXXXXXXELGMTRPRTATRRWDRPGPPGDDEIIGKILLSRASVTSMLSSRLTHLRMLRYGWADGDVSGTISKLARLERSVTPTDDSPRAVVADFLWVVPLDGTRVTLEHCLELMPLLEGLWKLD----------TESCVAAATRCLESIVRRFGGFVRDTLGASVSAGGVDLAREDRIARCREAHR 3869
RAITFDP+GQ MYCASPSGLRRWSWDN ASA+LEAMGDVPWGKVGAGALH+NADGQQ G + A +S A P+R GA T P DP S R Y DADAK SR S G + + R G + H+RDSKP + ++AS GG +G AF+VLGRQ+ LLPTAAE K S P XXXXXXXXXX G +S XXXXXXXXXXXX DDAVASV+ S RHRS+GTSISDTLV+A A+ AG R AA W EPAPGK DG N V D GR VAAALG+ A GDRH L G RR T G + D KWHKRVA F GV+ D +K ERR S G G G G+ + K A+ E R G +G A+ + V G T+ PW +DS GR EDSPPLLGSPEPA A ++P +PP PSSSRRSP+ + D VV +SS VGFP+ A S + G GP +GL DIF G GG ELGMTRPRTATRRWDRPGPPG+DE+I K LLSRA+ TS LS+R YGWADGDVSGTISKL RLERS T DDSPR VVADFLWVVPLDGTRVTL+HCLELMPLLEGLWK+ T CVAAATRCLESIVRRFGGF+RDTL A V+AG VDLAREDR+ARCREAHR
Sbjct: 219 RAITFDPDGQKMYCASPSGLRRWSWDNHIASAQLEAMGDVPWGKVGAGALHYNADGQQ-------GRNLGA-ASESSAPLDTPAR------------------GATTTATE---------------------------------SPSDPSLSTTDREYGDADAKVPESRPSRGNTFPASRDG--QRSHSRDSKPTME---KEAS--GGDDGSXXXXXXXXXXXXXMPAFQVLGRQVVLLPTAAEEKAKPSSPXX-----------------------------XXXXXXXXXXXXXXVGGPASAGGGRIQNRHAARAEAVAXXXXXXXXXXXXTDDAVASVAGSIRHRSVGTSISDTLVIADGCTADQADDRAGGREHRPAA--WSEPAPGKDDGGNYVRDCGRGVAAALGVVAAGDRHRLS--GERR-------ATGGADDGDECKWHKRVAGAFAGVEGTADDEKGMERRDDSGGDGSG-GKTRGKGNADEKEARREG--------DGTDRAANVGVPSGVTSRMTVDPWPKDSWVEAEGRNRAGVPGGG-------EDSPPLLGSPEPAPAAA----SNPARSMNEPPSF-PSSSRRSPDRPQPSDKTDTVVTRSSAVGFPITTADGSISGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGPEP-----EGLSVADIFGDGGGDCGGGGSD-------------------ELGMTRPRTATRRWDRPGPPGEDEVIAKTLLSRATATSTLSNR--------YGWADGDVSGTISKLTRLERSATVADDSPRTVVADFLWVVPLDGTRVTLDHCLELMPLLEGLWKVAETPACLPSFLTTRCVAAATRCLESIVRRFGGFIRDTLTAPVAAGRVDLAREDRVARCREAHR 954
BLAST of mRNA_P-fluviatile_contig12.1473.1 vs. uniprot
Match: A0A836CLK5_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLK5_9STRA) HSP 1 Score: 165 bits (418), Expect = 7.330e-39 Identity = 87/158 (55.06%), Postives = 104/158 (65.82%), Query Frame = 1
Query: 40 GFKAHEFVAHTGKTNCVAVGQRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVIDSGSFDRRFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVQFSPDGYILASAA 513
GFKAHEFVAH+ K NCVA+G G VLATGG+DKRVNVW+IGRA+ IWSL GNSS IE + FD EE L SGS+GGAVK +DL+ GKM R+FRGHMSNVT + SG+FD ++ +VQFSPDG++LAS A
Sbjct: 12 GFKAHEFVAHSTKVNCVAIGPH-GAVLATGGEDKRVNVWKIGRANHIWSLAGNSSPIECVCFDHAEENLYSGSSGGAVKQYDLTVGKMARNFRGHMSNVTALHSGAFDSAYLATGALDCVVKVWNTATKECVMAFKGHGAEVCEVQFSPDGFLLASGA 168
BLAST of mRNA_P-fluviatile_contig12.1473.1 vs. uniprot
Match: A0A1B6FE44_9HEMI (Uncharacterized protein (Fragment) n=2 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6FE44_9HEMI) HSP 1 Score: 106 bits (265), Expect = 1.710e-23 Identity = 48/98 (48.98%), Postives = 72/98 (73.47%), Query Frame = 1
Query: 43 FKAHEFVAHTGKTNCVAVGQRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNV 336
+K EF AH+ NC+A+GQ+SG+VL TGGDDK+VN+W IG+ + I SL G+ + +E++RF+ TEE + +GS+GG +K++DL A K+ R GH S +
Sbjct: 9 WKVQEFKAHSANVNCLALGQKSGRVLVTGGDDKKVNLWAIGKNNCIMSLNGHITPVETVRFNHTEELVAAGSSGGVLKIWDLEATKIMRTLTGHRSGL 106
BLAST of mRNA_P-fluviatile_contig12.1473.1 vs. uniprot
Match: A0A7S2CHB8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2CHB8_9DINO) HSP 1 Score: 102 bits (253), Expect = 2.910e-21 Identity = 45/102 (44.12%), Postives = 73/102 (71.57%), Query Frame = 1
Query: 43 FKAHEFVAHTGKTNCVAVGQRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVID 348
+K E+ AH G T C +G++SGQVLATGG+D+RVN+W++G+++++ SLTG++S +E L FD EE LV G AGG++++++L KM GH + + ++
Sbjct: 45 WKLQEYTAHAGCTRCARLGEKSGQVLATGGEDRRVNIWKVGKSNAMMSLTGHNSTVECLVFDKQEEVLVVGCAGGSMQVWNLEYRKMAGTLTGHRTGCSSVE 146
BLAST of mRNA_P-fluviatile_contig12.1473.1 vs. uniprot
Match: A0A482STH4_9ARCH (Katanin_con80 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STH4_9ARCH) HSP 1 Score: 108 bits (270), Expect = 3.450e-20 Identity = 50/100 (50.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query: 46 KAHEFVAHTGKTNCVAVGQRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVI 345
+ EFVAH+ + NC+A+G +S QVLATGG+D +VN+WR+G S+IW+L N S IE L FD E +VSG+ G++K+FDL+ GK+ R+ H NVT +
Sbjct: 11 RVQEFVAHSTQVNCLALGSKSSQVLATGGEDAKVNIWRVGSVSNIWTLGQNKSPIECLCFDADELCVVSGAMNGSLKVFDLNEGKLARNLGSHQVNVTSV 110
BLAST of mRNA_P-fluviatile_contig12.1473.1 vs. uniprot
Match: A0A3B4BK80_9GOBI (Katanin p80 (WD repeat containing) subunit B 1 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4BK80_9GOBI) HSP 1 Score: 101 bits (251), Expect = 4.240e-20 Identity = 54/153 (35.29%), Postives = 85/153 (55.56%), Query Frame = 1
Query: 55 EFVAHTGKTNCVAVGQRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVIDSGSFDRRFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVQFSPDGYILASAA 513
EF AHT + +C+++G+ SG++LATGG+D RVN+W + +A+ I SLTG+ S +E L+ + +EE +V+GS G++K++DL A K+ R GH +N+T + F+ + FSPDG LASA+
Sbjct: 14 EFEAHTSRVSCLSLGKSSGRLLATGGEDCRVNIWAVSKANCIMSLTGSKSPVECLQLNASEEQVVAGSQSGSIKIWDLEAAKL-RTLMGHKANITSLGCHPLSENFLASSSMDTNIKLWDVRRKGYILRYQGHTDAVRSLAFSPDGKWLASAS 165
BLAST of mRNA_P-fluviatile_contig12.1473.1 vs. uniprot
Match: F0YMU1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMU1_AURAN) HSP 1 Score: 100 bits (248), Expect = 1.370e-19 Identity = 52/101 (51.49%), Postives = 66/101 (65.35%), Query Frame = 1
Query: 46 KAHEFVAHTGKTNCVAVGQRSGQVLATGGDDKRVNVWRIGR----ASSIWSLTGNSSAIESLRFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNV 336
K HE+VA CVA+G RS QVLA+GG+DKR NVWR+ A ++WSL GNSS I L FD E LVSG+ GG+V+L+DL+ G+ R GH + V
Sbjct: 5 KLHEWVASPAVVTCVALGPRSHQVLASGGEDKRANVWRLRPGDPGAQNVWSLGGNSSPISCLCFDDAENTLVSGAQGGSVRLYDLTEGRCARALNGHRNEV 105
BLAST of mRNA_P-fluviatile_contig12.1473.1 vs. uniprot
Match: UPI000719CBEA (katanin p80 WD40 repeat-containing subunit B1-like isoform X1 n=7 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719CBEA) HSP 1 Score: 103 bits (257), Expect = 1.200e-18 Identity = 46/107 (42.99%), Postives = 77/107 (71.96%), Query Frame = 1
Query: 43 FKAHEFVAHTGKTNCVAVGQRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEEFLV-SGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVIDSGSF 360
+K E+VAH G NC+A+G +SG+V+ +GGDDK+VN+W +G+ + I SL+G+++ +E++RF T++ +V +GS GA+K++DL A K+ R GH +N+ +D F
Sbjct: 12 WKLQEYVAHAGNVNCLALGHKSGRVIVSGGDDKKVNLWLVGKPTCIMSLSGHTTPVEAVRFGGTDDSMVIAGSMSGALKIWDLEAAKIVRTLTGHKANIRSLDFHPF 118
BLAST of mRNA_P-fluviatile_contig12.1473.1 vs. uniprot
Match: A0A7R9CXC1_TIMCR (Hypothetical protein n=1 Tax=Timema cristinae TaxID=61476 RepID=A0A7R9CXC1_TIMCR) HSP 1 Score: 102 bits (254), Expect = 1.370e-18 Identity = 46/102 (45.10%), Postives = 71/102 (69.61%), Query Frame = 1
Query: 43 FKAHEFVAHTGKTNCVAVGQRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVID 348
F +FVAH NC+A+G +SG+VL TGGDDK+VN+W +G+ + I SL+G+ + +E ++F TEE + +GS GA+K++DL A K+ R GH +++ ID
Sbjct: 280 FGQEDFVAHGSNVNCLALGHKSGRVLVTGGDDKKVNLWAVGKHNCIMSLSGHITPVECVKFGHTEEHVCAGSQAGALKIWDLEAAKIVRTLTGHKASIRSID 381
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 589.0 |
| Seed ortholog evalue | 4e-165 |
| Seed eggNOG ortholog | 2880.D8LQ17 |
| Preferred name | KATNB1 |
| KEGG ko | ko:K18643 |
| GOs | GO:0000151,GO:0000226,GO:0000922,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0005874,GO:0005875,GO:0005886,GO:0006605,GO:0006810,GO:0006886,GO:0006996,GO:0007010,GO:0007017,GO:0007026,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008017,GO:0008092,GO:0008104,GO:0008150,GO:0008352,GO:0009987,GO:0010638,GO:0010639,GO:0010720,GO:0010941,GO:0010942,GO:0010975,GO:0010976,GO:0015031,GO:0015630,GO:0015631,GO:0015833,GO:0016020,GO:0016043,GO:0022008,GO:0030154,GO:0030424,GO:0030426,GO:0030427,GO:0030496,GO:0030901,GO:0031110,GO:0031111,GO:0031112,GO:0031114,GO:0031117,GO:0031344,GO:0031346,GO:0031461,GO:0032501,GO:0032502,GO:0032886,GO:0032991,GO:0033036,GO:0033043,GO:0033267,GO:0034613,GO:0036477,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043242,GO:0043243,GO:0043244,GO:0044297,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044877,GO:0045184,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046907,GO:0046982,GO:0046983,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051013,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051493,GO:0051494,GO:0051495,GO:0051641,GO:0051649,GO:0051960,GO:0051962,GO:0060284,GO:0060322,GO:0065007,GO:0070507,GO:0070727,GO:0070840,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0080008,GO:0097458,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:0120035,GO:0120038,GO:0150034,GO:1901879,GO:1901880,GO:1901881,GO:1902494,GO:1902903,GO:1902904,GO:1902905,GO:1990234,GO:2000026 |
| EggNOG free text desc. | microtubule severing |
| EggNOG OGs | KOG0267@1,KOG0267@2759 |
| COG Functional cat. | E |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko04812 |
| Hectar predicted targeting category | signal peptide |
| Exons | 12 |
| Model size | 3989 |
| Cds size | 2805 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815516.0032046-UTR-P-fluviatile_contig12:2110037..2110178 | 1622815516.0032046-UTR-P-fluviatile_contig12:2110037..2110178 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig12 2110038..2110178 + |
| 1693562108.7288628-UTR-P-fluviatile_contig12:2110037..2110178 | 1693562108.7288628-UTR-P-fluviatile_contig12:2110037..2110178 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig12 2110038..2110178 + |
| 1622815516.7363987-UTR-P-fluviatile_contig12:2110699..2110957 | 1622815516.7363987-UTR-P-fluviatile_contig12:2110699..2110957 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig12 2110700..2110957 + |
| 1693562108.7383354-UTR-P-fluviatile_contig12:2110699..2110957 | 1693562108.7383354-UTR-P-fluviatile_contig12:2110699..2110957 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig12 2110700..2110957 + |
| 1622815517.0357895-UTR-P-fluviatile_contig12:2111693..2111756 | 1622815517.0357895-UTR-P-fluviatile_contig12:2111693..2111756 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig12 2111694..2111756 + |
| 1693562108.7509704-UTR-P-fluviatile_contig12:2111693..2111756 | 1693562108.7509704-UTR-P-fluviatile_contig12:2111693..2111756 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig12 2111694..2111756 + |
| 1622815517.046755-UTR-P-fluviatile_contig12:2112250..2112361 | 1622815517.046755-UTR-P-fluviatile_contig12:2112250..2112361 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig12 2112251..2112361 + |
| 1693562108.7602916-UTR-P-fluviatile_contig12:2112250..2112361 | 1693562108.7602916-UTR-P-fluviatile_contig12:2112250..2112361 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig12 2112251..2112361 + |
| 1622815517.0612593-UTR-P-fluviatile_contig12:2113013..2113624 | 1622815517.0612593-UTR-P-fluviatile_contig12:2113013..2113624 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig12 2113014..2113624 + |
| 1693562108.7688046-UTR-P-fluviatile_contig12:2113013..2113624 | 1693562108.7688046-UTR-P-fluviatile_contig12:2113013..2113624 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig12 2113014..2113624 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815517.0754526-CDS-P-fluviatile_contig12:2113624..2113900 | 1622815517.0754526-CDS-P-fluviatile_contig12:2113624..2113900 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 2113625..2113900 + |
| 1693562108.7775187-CDS-P-fluviatile_contig12:2113624..2113900 | 1693562108.7775187-CDS-P-fluviatile_contig12:2113624..2113900 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 2113625..2113900 + |
| 1622815517.0892606-CDS-P-fluviatile_contig12:2114434..2114749 | 1622815517.0892606-CDS-P-fluviatile_contig12:2114434..2114749 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 2114435..2114749 + |
| 1693562108.786314-CDS-P-fluviatile_contig12:2114434..2114749 | 1693562108.786314-CDS-P-fluviatile_contig12:2114434..2114749 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 2114435..2114749 + |
| 1622815517.101322-CDS-P-fluviatile_contig12:2115355..2115938 | 1622815517.101322-CDS-P-fluviatile_contig12:2115355..2115938 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 2115356..2115938 + |
| 1693562108.79742-CDS-P-fluviatile_contig12:2115355..2115938 | 1693562108.79742-CDS-P-fluviatile_contig12:2115355..2115938 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 2115356..2115938 + |
| 1622815517.1138356-CDS-P-fluviatile_contig12:2115992..2117124 | 1622815517.1138356-CDS-P-fluviatile_contig12:2115992..2117124 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 2115993..2117124 + |
| 1693562108.8056288-CDS-P-fluviatile_contig12:2115992..2117124 | 1693562108.8056288-CDS-P-fluviatile_contig12:2115992..2117124 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 2115993..2117124 + |
| 1622815517.1238866-CDS-P-fluviatile_contig12:2117574..2117658 | 1622815517.1238866-CDS-P-fluviatile_contig12:2117574..2117658 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 2117575..2117658 + |
| 1693562108.8135502-CDS-P-fluviatile_contig12:2117574..2117658 | 1693562108.8135502-CDS-P-fluviatile_contig12:2117574..2117658 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 2117575..2117658 + |
| 1622815517.140859-CDS-P-fluviatile_contig12:2118369..2118502 | 1622815517.140859-CDS-P-fluviatile_contig12:2118369..2118502 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 2118370..2118502 + |
| 1693562108.8220336-CDS-P-fluviatile_contig12:2118369..2118502 | 1693562108.8220336-CDS-P-fluviatile_contig12:2118369..2118502 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 2118370..2118502 + |
| 1622815517.1541576-CDS-P-fluviatile_contig12:2119603..2119765 | 1622815517.1541576-CDS-P-fluviatile_contig12:2119603..2119765 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 2119604..2119765 + |
| 1693562108.8309493-CDS-P-fluviatile_contig12:2119603..2119765 | 1693562108.8309493-CDS-P-fluviatile_contig12:2119603..2119765 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 2119604..2119765 + |
| 1622815517.1733744-CDS-P-fluviatile_contig12:2120551..2120671 | 1622815517.1733744-CDS-P-fluviatile_contig12:2120551..2120671 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 2120552..2120671 + |
| 1693562108.842529-CDS-P-fluviatile_contig12:2120551..2120671 | 1693562108.842529-CDS-P-fluviatile_contig12:2120551..2120671 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig12 2120552..2120671 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1473.1 >prot_P-fluviatile_contig12.1473.1 ID=prot_P-fluviatile_contig12.1473.1|Name=mRNA_P-fluviatile_contig12.1473.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=935bp
MMMMMVVVVLVMLLVLLPTPVQLPVLLPLAAPRHRAITFDPEGQNMYCAS
PSGLRRWSWDNDTASARLEAMGDVPWGKVGAGALHFNADGQQLLAASCAG
SRVSVWAVDSDADHPLPSRPPPPEQQQQEQEETGGAFGADTAMAHIEAAS
VPPLAAAGSAASSPPDSPPQGGKEATAGKPPDPLSSNVTRAYDADAKSVS
SRSSGQSRSSERAGRDEWHHNRDSKPAAQEKKRDASPIGGGNGGGVGLAF
EVLGRQLPLLPTAAERKLSSSPPGNAPATAASPMPNPMVTAAPGADSNTA
ATASAASAAAAKNPASVVAYGSSSVANVMLNNRRSSRAAAVAATVAAVAS
AKAATDDAVASVSSSGRHRSIGTSISDTLVVAAHPAANGTAGLAGSRYRA
SAAGAWPEPAPGKHDGSNVEDHGRDVAAALGIEAGGDRHGLLGGGSRRQG
DGLAALTVGKVNVDYKWHKRVAEGFTGVDDAVDKDKQGERRMYSSGSGGG
DGRNKDKSTAEASEDRMAGRRGEEGGSEGRTTASEMAVDVGATAGKLPCP
WWQDSQGGFVGRGGEGGRAGEGEGDGGGEDSPPLLGSPEPARTAQLAQLT
SPLTHEAKPPHLLPSSSRRSPEISRQRRPPDAVVGQSSPVGFPVRVAGTS
SNHGGASAAAALSIFVSPEVRETEAIGPSAAAAAFDGLDDGDIFSKAGRS
DGGGGDGDGSGGGGVGGGGVGGGGAGELGMTRPRTATRRWDRPGPPGDDE
IIGKILLSRASVTSMLSSRLTHLRMLRYGWADGDVSGTISKLARLERSVT
PTDDSPRAVVADFLWVVPLDGTRVTLEHCLELMPLLEGLWKLDTESCVAA
ATRCLESIVRRFGGFVRDTLGASVSAGGVDLAREDRIARCREAHRAFIRG
YHHLERSEGEFYEDRRIAAVAGRLRPLFESYFMS* back to topmRNA from alignment at P-fluviatile_contig12:2110038..2120671+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig12.1473.1 ID=mRNA_P-fluviatile_contig12.1473.1|Name=mRNA_P-fluviatile_contig12.1473.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10634bp|location=Sequence derived from alignment at P-fluviatile_contig12:2110038..2120671+ (Porterinema fluviatile SAG_2381)
ATGCTTCAATCTGGCTCAAGCTCCCTCGGCTCTTTCACGGGTTTCAAGGC
GCACGAGTTTGTGGCGCACACCGGCAAGACCAACTGCGTTGCTGTTGGCC
AGCGGTCAGGCCAAGTCTTGGCTACGGGGGGAGATGATAAGGTGCGGGAA
AAGGGCAAGATTCACGGTTCTCTAGCGTGTACGCACTCATCCTCGAAGGG
AACGCAAACATGTGGGCAACTACAAACCCAGTGCTTTCATTGAGCAGGCC
GCACACACCGCAGGTGGCCCTCTTTCGTGTGTGTTCAACCTTGCACCGAC
AACATAGTTTAGAGACAGAAAAGGCGGCAAGAGTAGCCAAATTGGTATAT
TGTACATTTAAAAGGTAGGGCTGACGAAACCAGCTACGCAGCTTTAGCGG
TCAAATATTCTGAGCGTCGACACAAAGTCAAAACTGCTGTAAGCGACACT
TGCCGCGTACGCGCGGAAGTCCAAAAACATGAGCGAAGTGTTGCACCGAG
ACAAAGAGAGAGAAGGCGCGAAAACCTGTCAATATCGCTTTTCTCGCTTT
CTCTACAAGCGAAAAAGCCCTTCCACAGCAAATTGTTTTCCAGTTCGACT
CTGTGTCGCTGTTCCTCCTTGCCCTCCACGTGGGTGCGCGGCCGACATTC
ACGTTCGGGCAGAGGGTAAACGTTTGGAGAATTGGCAGAGCGAGCAGCAT
TTGGAGTCTTACAGGAAACAGCTCTGCCATAGAGAGCTTGCGCTTCGATC
CCACGGAAGAGTTTCTCGTGAGCGGCAGCGCAGGGGGCGCTGTAAAGCTA
TTCGACCTCAGCGCAGGGAAGATGACCAGGCACTTTCGAGGGCACATGTC
GAACGTGACCGTTATCGACAGCGGCAGCTTCGACAGACGGTTTGTGACGA
CCGGATCGATGGACTGCCAGGTGTGAGCTCTCGTACGACACAGGTTTGGC
GCCAAGACGATATGTGCGTGCCGGAGGCATGTCGCAAGATTAGCATCGAA
CACCTTTCTGTTTGCTGCCGAGCATTTCCAATGTTGGTCAGTGAGCCTTG
AGACTGAGGACGAGGCTTGTACGCGCCACGCGCTAGACCAGGAGGCCGGT
GATGCAGAGTTTAGAATACCCAGAGATTACCTATGGTGGTAACATGATGA
AATTATGATCCGTGATCCGAGGACGATGCCTGTACGTGCCACGCGCTAGA
CACGGAGACCAGTGTTTCGGGGTTCATATTGCCCAGCGATTACCAATGGT
CTTGATATAATGAGATTTTGATCTGCGATGGAGCGGCTGTCAAATAGTAC
GACATTCGGATTCAGCTGAAGATATTCTTAGAGGCTCTATCCTCTACTGG
AACCTACAAGCATTTTTCGTGAGCCCATGATTGTACCCTCTAAGGGATTC
ATTGATTTCTACCGCGAAAGCCGGTCAAATCTATCGCTTCTCAGACCAGC
TTGCGTCTTGAAAAATTCCACCTGCATTGATATTGGATTCATGGTTTATA
CCCGCTTGAGTTTCAGCAGTCTTCCAAAACTGATACCTGATATACCCTGC
AAAAAATCATGAAACAACGGGTGGCTTCAAGATCAACACAGCCTTTCATT
GCTACCTCTACATACAATGCTTTTCTGGCGCTGTTGTGCTTTGGTGTGTG
GCGTAGGTAAAGCTGTGGAATGTGGAAACCAAGGAATGCGCCATGGCCTT
CAAAGGACACAATGCAGATGTGAGAAGTGTGTGGCGTGGTTGACTAGGTG
TTTTACCTCAGGAAGTGGATCTTCTCGGGGTGCGGCTGCTGGTGCTGTTG
AGGCTGAGCGTTTTCAAGGTCTTGTTCGTATGGAGTCATTTGTAGATTTG
TATTATTCCTTCTTTCAAAGGGGCAGGTCCATCCTTGCGGAGCAATTTCT
ACTGTTCCGAATCGCTTCTTCTCGCAAACCAATGACCTGAGAATGGTTTG
GCGCCTGATGAAGTCATACACGGCCGTCTAGTCCTGTGGTTAACTACACG
TAGAATTTCCCGGAATTTGGGCAGCTGAGCGGCATCCTACCCAGATATAT
CCTTCTCTCCGCAAAGTAGGTCGCATGCCGGTTTTCACCGACAAACCGCC
TTCAAAAGTATCTCTCGGACGCCATTCGGCCATCCTGCGTAATCGTTTTC
ACTAAAAGCAAGTGCTTGAGACAACAGCTTTCGGTTTCTTGAAAAACTGA
CGGGCGTTTTCAGGTGACCGACGTGCAGTTCAGCCCGGACGGTTACATCC
TGGCGTCGGCGGCCGCTGATGGTCAGGTGAAGCTGTGGGACCTCAGGGCT
GGCAAGCCCATGCACACGTTCCAGGTGGGGACAGATGCAGTAATTTATGC
TCCGTAGAAATTCGACCGGCAGAAGTTAGTCTAGACTTTGCGTGAAGTTA
ATTCACCTGACAAGTCCTTCCTCTGTGGTGTGCGCTGCTTCTCCAGCTGA
TCGGTGTGGGGAACGCTCACGAAAATTTAGTTGATGTTCGTAGCCTCCGA
AGTCGAAAGGAAAATCATCATTTCGTATGTTTTGATACTTTCGTGCGCTG
CTGCAGCTGCGTGGTGTAGGCAACGCCCACGCAATCGTGTTTGTCGACCA
CTTTTTTCGTCGGAATCGTTTCTTGTCTCCATTTCCAAGCACGTTTACAT
CTATTGCCCCCGTTCTGCCATGGGTGCTCGAACTCATCACGCAACCGACG
GGAGGTGCTCCCACGTTCGCTTTCGTTTTTCGTCTGCGCGCCGTCTACTC
TGAACCAATTGATGTGATCTAGACACGGCGCCCGAGGAAACACCCGCCTT
GATGTCATCCCGAAGACTTCCCAAGCATAGCGGCCGATGCGAGGAGAAAC
ACGCCAACTTGAAAAACGCATGCTATTCCCATTGACAGTTGATCCAGCTC
TGACCGGCAGCGCTTGTATCAGCCGGACGTGACACTCGCTCTCCAACACT
TACGACCACCCGGGCACACCACACAGGCGTGTTCGGGAGCGGTACGCGCG
ATAAGGTTCAACCCCCAGGAGTTCTTGCTCGCGGTGGCCACTAGCGACAG
GACCGTGAAGCTGTACGACATCGAGTTCATGGAGCTTTTCTGCATCACGG
CGCCGGACACCTGCCCCACCAGGCACGGTTTTTAATTTACGTTGAAAGAG
TCTGCGTCTAGTGTGCAGTGATGACGCCCTTGCGTCGGCATCATGTTGTA
CTACTTTGAAGCATGCCTAGGACGGCCGGCGAAGACGACTAAAAGAAATC
GGAAAAAGACAGCGGTAATGGCACTGGACATTTCCACCAAACCACAGCAG
GTATCTTTCGGTGGCAACAATGCCACAGAGTCAGCTCCCCTCTCCCATTC
TCGACGAAGTACCCACTGGGATTATTGCTCGCCTGGTCGTTCCTGTGCTG
CTCCACCTGCCAGCATATCTCCCGACGTTGCTGCCACTGCGACCACTAGT
CATGCCACTGCTTCTGAGAAGTTAATCGCTTGCATATCTCCGGCTTTCAA
TTTCCGCCGCTGATCCGCTGCTGCTGCCGGTAATGCTGCCATCGGTTCCT
GCTGCTGCTCGCTCTTGTGCTGCTGCTGCTGCTGCTGATGATGATGATGA
TGGTGGTGGTGGTGCTGGTAATGCTTCTGGTACTGCTGCCGACGCCGGTA
CAACTGCCGGTGCTACTGCCGCTCGCCGCTCCTCGGCACAGGGCGATAAC
CTTCGACCCAGAGGGACAGAACATGTACTGTGCGAGCCCCTCGGGCCTAA
GGCGGTGGAGCTGGGACAACGACACAGCCTCGGCGAGGCTGGAGGCCATG
GGTGACGTCCCCTGGGGCAAGGTCGGGGCCGGGGCGCTCCACTTCAATGC
CGACGGGCAACAGGTGCAGCGAGACGGTCCGCTGTGGCGCGCTCTCTTCC
ATGGAGCATAAGTAGCAGTTGAGCCTCGCCCGTGACAAACTCCGCCAGGA
GAAGCCGAAGCTCGGTTTCTCGAAGGAAATCAGAAACGCTGACAAGGATA
TCTTACAGTTTGCACACTGCCAGACGCAAGAAACCCAGCCCACGCCGAAA
TATCAGTTTCTCAAACGTAGGCCGCTCCTGTTAACGGAGTGCATTTTCGC
ATCATCTGTTAGTCGTTGCCGCTCCCCGTCCCTTTCTCGGCATCAGTGAG
ATGTTGAGCGGCATAAGCTGCCGCGGCGTAAGCTTTCCCGGCGGCTGACC
CTCTGCACCCACGTGGTAAAAAAACGGGGGCTGATCTAGCCTCCGCCTAG
GGAGGCGATTCATGGTACCGGCGAACGGCAACCCTCAGGTGGGTACCTGT
GGGAATGAGGTCCCACCCTGCTGCGGCACGACTTCAAGCATTTTCTTGCC
CATCGCCGCTGCCGCTCGTCGCCGTTTGCACCGCTTCCATTCGTCAGCTC
CTGGCCGCTTCTTGCGCAGGTAGCCGGGTGTCTGTATGGGCCGTCGATTC
TGACGCAGATCACCCGCTCCCATCTCGGCCGCCGCCGCCGGAGCAACAGC
AGCAGGAGCAGGAGGAGACCGGCGGAGCATTTGGAGCGGATACCGCGATG
GCACACATCGAGGCAGCATCGGTGCCACCACTAGCAGCAGCCGGATCTGC
GGCATCATCACCACCCGATTCGCCTCCGCAAGGGGGAAAGGAAGCAACGG
CGGGCAAGCCTCCCGATCCTCTGTCGTCGAACGTAACAAGGGCGTACGAT
GCCGACGCGAAGGTACGGACGATTACATCGAATCTTGTTATACAATAGTG
AGCCGATCTGCCTGTTCGTCAGGGTTCGGAGGGGAGGCTCGATGGCGGCC
GACCGCCGTTCTCGCTGCCACTTTGGTGCTGTCCTGCCTGTCCGTCCTTT
GGTGGAGAAGTAGATACATTCACCGCACACCAGAAAATGTGTTTCCCTTT
TTCGAAAATTGGAAATCGATAAATACTTATGTTTTCTCATAATCATCAGC
TCCAGAACGTTGTACGCCACGGGGTCTTACATCTCCAATTATCAAGAAAA
TACTGCTTCTAACCTTTTTGTTTTCGGTTTCTAAAGAATGAAATGAAATG
TTTTGTGCCTGCGGCGACTGTAATAAAGCACAACACACGAAGTAAAACGC
TGGCTCGAACACGACGAATGTCACCCTTGTCCGGACCACGGTTTTGCCGA
CGGGGAAAGGACGAGATGTCGTGCGAGAGGAACGAATCCGGGAACTAAAC
ATAACACCACGCCCACAAGCAAGCCTCTTGCAAGTACGGTTCGTCCCCTT
TCCCTTCTGCTTCACCCCATTCTCGATGCCGTACCCTCCTCTTCCTCCCC
CCCCGCCCCCCCCGACAGTCGGTCTCATCGCGGTCGTCGGGACAAAGCCG
AAGCAGCGAACGGGCGGGCAGAGACGAGTGGCATCACAACCGGGATTCCA
AGCCAGCGGCTCAGGAGAAAAAGCGAGATGCCAGCCCAATCGGCGGAGGC
AACGGCGGCGGCGTTGGGTTGGCGTTCGAGGTCCTCGGCCGCCAGCTCCC
CCTGCTTCCAACCGCCGCCGAACGAAAGCTGTCGTCTTCCCCGCCGGGGA
ACGCTCCGGCCACCGCAGCATCGCCAATGCCGAACCCTATGGTGACAGCA
GCACCGGGGGCGGATTCAAACACTGCAGCTACCGCCTCCGCCGCCTCCGC
CGCTGCTGCGAAAAACCCAGCCTCCGTTGTAGCCTATGGCAGCAGCAGCG
TTGCTAACGTCATGCTCAACAATCGTCGATCCTCTCGCGCGGCGGCCGTT
GCGGCGACCGTTGCCGCCGTAGCCTCCGCGAAGGCCGCCACCGATGACGC
GGTTGCTTCCGTCTCCAGCTCTGGCCGTCACCGGAGCATCGGGACCTCCA
TCTCGGACACGCTCGTCGTCGCTGCACATCCAGCCGCCAACGGTACGGCT
GGTCGGGAGGCAGCAGTGGGAGCGGGGGTTGACCGACCGGGAGGTGGAGG
AGAAGGTTTAGCCGGGAGTCGCTATCGTGCGTCGGCAGCAGGAGCTTGGC
CAGAGCCAGCTCCTGGGAAGCACGACGGCAGCAACGTTGAAGATCACGGG
CGTGACGTCGCGGCGGCGTTGGGCATTGAAGCCGGCGGTGATCGTCACGG
ACTCCTTGGGGGCGGTAGTCGGCGGCAAGGGGACGGGCTAGCGGCGTTGA
CGGTGGGAAAGGTCAACGTCGACTACAAATGGCACAAGCGTGTCGCGGAA
GGCTTCACCGGAGTAGACGACGCAGTCGACAAGGACAAGCAAGGGGAGCG
CAGGATGTATAGCAGCGGAAGCGGCGGCGGCGATGGCAGGAACAAGGATA
AGAGCACCGCGGAAGCCAGCGAAGATAGGATGGCGGGGAGACGGGGAGAG
GAGGGCGGAAGCGAAGGAAGAACAACGGCTTCTGAAATGGCAGTGGATGT
AGGGGCAACAGCGGGGAAATTGCCGTGCCCTTGGTGGCAGGACTCGCAAG
GAGGATTCGTTGGAAGAGGAGGGGAGGGCGGAAGAGCAGGAGAGGGAGAG
GGGGACGGAGGAGGAGAGGACTCGCCCCCGCTGCTCGGCTCTCCAGAACC
GGCTCGTACTGCTCAGCTAGCTCAGCTAACCTCGCCCCTGACGCATGAGG
CGAAACCCCCACATCTCCTCCCCTCCTCGTCGCGGCGATCCCCTGAAATA
TCGAGGCAAAGACGACCACCAGATGCGGTCGTGGGCCAGTCGTCCCCGGT
GGGGTTCCCCGTCCGCGTCGCCGGCACCAGTAGCAATCACGGTGGTGCGA
GCGCGGCCGCTGCTCTTTCCATTTTTGTGTCGCCGGAGGTGCGCGAGACC
GAGGCGATAGGCCCGTCAGCGGCTGCCGCTGCTTTTGATGGTCTGGACGA
TGGCGATATATTCTCGAAGGCCGGAAGAAGCGACGGTGGCGGTGGCGACG
GCGATGGGAGTGGAGGCGGCGGCGTCGGGGGCGGCGGCGTCGGGGGCGGC
GGCGCCGGTGAGCTGGGGATGACGCGGCCTAGGACGGCCACACGTCGGTG
GGATAGGCCGGGCCCGCCGGGCGACGATGAGATCATCGGAAAGATCCTGC
TTTCGAGGGCATCCGTGACTTCGATGCTTTCCAGCAGGTGAGTCTAGAGA
GGTGGCTAAATATCTCCACGACGCTGTCTGCGCAACCGAGCGGAGGTGTG
CTGAACTACATGTTTATGATACTGACCTGCTAGACGCCCTGAATATTTCT
GCGACTCGACGTTGAAGGAGAAGGGAAGACAGTGCAGAGTTCGTTGACTG
GCCCATGCCAACAAATCTTTGAGGCACGAAGCAGATGATTCCTCCTCTCG
TTCCCCTTTCCTCCCCGGGTCTTCGTGAATGCATCCTCCGCCGCTCACAT
CGCTCTTCCACTAAGTGAGGCAACCAGCGAAACGAGTGCTCAGAAATGTT
GAAGCACAAGTCGCGCTCGCCATTCCTGGGCTGCCTGCAAAGAGAACACC
ACCCTTATCTCGTTCAGGCCGGTTCTTTGTCCTCGAAACCCGTTCACTCT
ACTCTTCCCGTTCCCGGTCCGCCCTACCAATTTCCAGGCTTACCCACCTG
CGGATGCTAAGGTACGGATGGGCGGACGGCGACGTGTCCGGCACCATATC
CAAGTTAGCGCGACTAGAGAGGTGAGTCAGTCGCATGGTGGGTCAGACTC
CCGGCCTGCTTCGAGCAGCACAATTTCTGTCTCGTGCACGGTCAGTGGTT
TCTGGCTACCTTTGACATAAGGGTCGCTGGAAATCAACGCCAACAAGTGT
TGCGGGTATACTGCTGATGACGCTGTCTTTACGTAGCGACGAGTCTCAAG
CTTGTCCCTCGCACGCTTGTGCCGTACGATATGATAGTGAAGGCTCGGCG
GCGGATCCATTGCAAGAGTCTTTGCGTGGAGTATAGCCCAGCCGTGCAAA
GCGCAGGAATCCGTGTTCCTTCCGCAAGGGCGTCCTGTTCTTCGGCCGCG
CCCTCTGTGCTTCGTGCCACGGAGCTCGATACACAACAACTAAAATGCCG
CGGCAGGAGTACCCTTGTCCTGGTTAACTCACCAAGAGCTGCAACCCCGA
TCGAAAATTTTGTTGGGTTATTGAGCTGTCCCGAGCCGGGTACTTGCGGT
TCCTTGAATTGTCCCGGGACAATTCCGGGTTCGACGGTCACGGGTACCCG
GCAGCGGGTACCAAGTTCCAAGGTCGACTGGGTGCAACTCTGATCTCGCA
TCAACCCCGCACAACTGGCGGATTGATCTCCAAGGTTATTTTGTTTGCCC
ACGATCTGACGGCCCCCTTTGCATGTCTTTCGTTCCTGGCGCAAGCTGAC
ACCCCCGTTCTTCTCGTTTCAACTTCAATCAGGTCCGTCACCCCGACCGA
CGATTCTCCCAGGGCCGTAGTAGCCGACTTCCTGTGGGTGGTGCCTCTTG
ACGGGACTCGGGTGACGCTCGAGCACTGCTTGGAGCTGATGCCTCTTCTA
GAGGGACTGTGGAAGGTGCCTACATTCTCATCGCATCGAACACCTCATGC
GGACACTACGCAGTTGTTGCACTCAGATACTTGGTACACCACTCAAATCG
ATTGAGACTTGGTGTGCCCCGCTTGAACCGAAGACTTGAAAGATCGAAAG
AACAAAAATCACAACAAAACACACAAATATTAAGTGACAGAATGAATGGT
TGCGTCGCCGGGGCGGGGCCTTGCTCTCTTGTCGTGGAAACGCGGCAGTG
CCCGTACATCGAAACAAAACAGAGCTCCATTCGTCGGGAAAGCAAAAAAA
AGGCTCCGGGTCAAGAATTTGTTACCCTGACCTTTTTCTTCCGCCAGATG
TCCCTGCGATACTGGTGAGGGCATAGCAAAGGCCCGTTGTGCACATTACC
CGAGAATCCCAAGAGCGCAAGGCTTTCGAAGAAGCGATTTTCGTTTGACG
ACGCTAGTCTTCGGGCACGTGAAGGACCTTGGCGTTCCAAGGACATGTTG
TGTCTACTTTCCGCGCGCTTTTCCTCGGCGCTTCGCCTACCCCGCTGACT
AAATTTCGAAAACTGACCTCCGTCCACGGCCCGCTGGCGCACGTATCAAT
AGCCTTCGTAGGCTAGGATACGCTGAAGCACATAATTTGAAAACAACGCA
CATCTTCCCTTGTGATTCCCGCGACCTGTAGACATGAATAGCACCGCCTT
CTTCGCGAATTGCTTTCTCAACCATGCGCCGCATGATGTCAACACGCAGT
GCCGTCTCTCGTACAGTGCCGCCCAGCTCGCAAGAAATCGAGGCTCAGAT
TCTTGAAAAAATAAGAAACACCCCGTAAGAAATTGGGCTCAGCTACCGGC
GCTGCACTTCATCCTTTGCTATAGCCTGCGCTCTGGCGGTAGGATCAAAA
TCAGAGATAGGCCTCGCTCAAACTAGGTGTTTCCTATGAACGGGCCGGCA
CTGCTGTATTTCTCGCGCAGGCTTGCGGCAAGTTTTCCGACCAAACATCA
AACATCGCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCCTCTCTTGCCGTGTGATTTCTTGCTCCCGGGAATGCGCGGTTGT
GTGCGCGCACACGCAGCTGGACACGGAAAGCTGCGTGGCCGCCGCTACGC
GCTGCCTGGAGTCGATCGTGCGACGCTTTGGTGGCTTCGTGCGGGATACT
CTCGGGGCGTCGGTCTCCGCAGGGGGGGTCGACCTGGCTCGCGAGGACAG
GATAGCGCGCTGCCGAGAGGCTCATCGGGTGTGGAAACGGGGACATACGA
ATAGGGAGGGGTTTGCTCGCGTGCCTTGACGCAGTTGGTTGACCATTGAC
CGCGGGAAAAAGTTGAAGTGGGGCCATCGTCGTTCCTTGTTCGAGCAGAG
ACGCAGCAATGTATCGACGCCGGAGGTGATTTCCAGAGTCTCTTGGAGGG
TTACCGAGAAGTGTCTTCGCTGCTTGTGAGCACCACCTGCCTCCATCTCC
CGCAGCGATCGCTCTCTCGCCTGGAAATACGTTGCACCAAATTTCTATGG
TGAGAGATTACATCCGTTGGATGTTGTCCCCACGTCCTCCATCCATGAGG
GTATGCCTCGATTGCTCTCATTGTCCGGTTCACTGTGTTGATCCAATTCG
CTGCTGACGAAGGGTGGCGTGCCAAGAAGACCGCCTCGACGGCTAGCAAA
AACAGCGCCAGCTACAGGAAGGTCCGCCCTGCCGTAGCGCCGACACAATG
CAACGAAAGCTTTTTATGCACGCACCTTGCCGTGTCGGCCGAAGTCGAAG
ACACGCTGGCGCTGAACAAAAGCGTACGATCGCCATCTTACCGGACCCCG
AGCTATCACTAGACGATCCTCACAGTGAGCATGCACGGCGTGCTTTCGTC
CACCCCGCAAACGTTGAACAAGGAGCTGAGGATGGAGCAATCCCGAACGA
AACAAAAGACACTTGTCGGCAGGTCGTCCGAAATCACCAATACTTCGATA
TTCCACCCCTCCCTCTCTTCGCTGCCTCTTGTCACCCGCAACAATATGCC
CCCCCACCCCCAAGGCCTTCATCCGGGGCTATCATCATCTTGAGAGATCC
GAGGGAGAGTTTTACGAGGACAGGAGGATAGCGGCGGTGGCGGGGCGGCT
GCGACCGCTGTTCGAGAGCTACTTTATGTCTTGA back to topCoding sequence (CDS) from alignment at P-fluviatile_contig12:2110038..2120671+ >mRNA_P-fluviatile_contig12.1473.1 ID=mRNA_P-fluviatile_contig12.1473.1|Name=mRNA_P-fluviatile_contig12.1473.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5610bp|location=Sequence derived from alignment at P-fluviatile_contig12:2110038..2120671+ (Porterinema fluviatile SAG_2381)
ATGATGATGATGATGGTGGTGGTGGTGCTGGTAATGCTTCTGGTACTGCT
GCCGACGCCGGTACAACTGCCGGTGCTACTGCCGCTCGCCGCTCCTCGGC
ACAGGGCGATAACCTTCGACCCAGAGGGACAGAACATGTACTGTGCGAGC
CCCTCGGGCCTAAGGCGGTGGAGCTGGGACAACGACACAGCCTCGGCGAG
GCTGGAGGCCATGGGTGACGTCCCCTGGGGCAAGGTCGGGGCCGGGGCGC
TCCACTTCAATGCCGACGGGCAACAGATGATGATGATGATGGTGGTGGTG
GTGCTGGTAATGCTTCTGGTACTGCTGCCGACGCCGGTACAACTGCCGGT
GCTACTGCCGCTCGCCGCTCCTCGGCACAGGGCGATAACCTTCGACCCAG
AGGGACAGAACATGTACTGTGCGAGCCCCTCGGGCCTAAGGCGGTGGAGC
TGGGACAACGACACAGCCTCGGCGAGGCTGGAGGCCATGGGTGACGTCCC
CTGGGGCAAGGTCGGGGCCGGGGCGCTCCACTTCAATGCCGACGGGCAAC
AGCTCCTGGCCGCTTCTTGCGCAGGTAGCCGGGTGTCTGTATGGGCCGTC
GATTCTGACGCAGATCACCCGCTCCCATCTCGGCCGCCGCCGCCGGAGCA
ACAGCAGCAGGAGCAGGAGGAGACCGGCGGAGCATTTGGAGCGGATACCG
CGATGGCACACATCGAGGCAGCATCGGTGCCACCACTAGCAGCAGCCGGA
TCTGCGGCATCATCACCACCCGATTCGCCTCCGCAAGGGGGAAAGGAAGC
AACGGCGGGCAAGCCTCCCGATCCTCTGTCGTCGAACGTAACAAGGGCGT
ACGATGCCGACGCGAAGCTCCTGGCCGCTTCTTGCGCAGGTAGCCGGGTG
TCTGTATGGGCCGTCGATTCTGACGCAGATCACCCGCTCCCATCTCGGCC
GCCGCCGCCGGAGCAACAGCAGCAGGAGCAGGAGGAGACCGGCGGAGCAT
TTGGAGCGGATACCGCGATGGCACACATCGAGGCAGCATCGGTGCCACCA
CTAGCAGCAGCCGGATCTGCGGCATCATCACCACCCGATTCGCCTCCGCA
AGGGGGAAAGGAAGCAACGGCGGGCAAGCCTCCCGATCCTCTGTCGTCGA
ACGTAACAAGGGCGTACGATGCCGACGCGAAGTCGGTCTCATCGCGGTCG
TCGGGACAAAGCCGAAGCAGCGAACGGGCGGGCAGAGACGAGTGGCATCA
CAACCGGGATTCCAAGCCAGCGGCTCAGGAGAAAAAGCGAGATGCCAGCC
CAATCGGCGGAGGCAACGGCGGCGGCGTTGGGTTGGCGTTCGAGGTCCTC
GGCCGCCAGCTCCCCCTGCTTCCAACCGCCGCCGAACGAAAGCTGTCGTC
TTCCCCGCCGGGGAACGCTCCGGCCACCGCAGCATCGCCAATGCCGAACC
CTATGGTGACAGCAGCACCGGGGGCGGATTCAAACACTGCAGCTACCGCC
TCCGCCGCCTCCGCCGCTGCTGCGAAAAACCCAGCCTCCGTTGTAGCCTA
TGGCAGCAGCAGCGTTGCTAACGTCATGCTCAACAATCGTCGATCCTCTC
GCGCGGCGGCCGTTGCGGCGACCGTTGCCGCCGTAGCCTCCGCGAAGGCC
GCCACCGATGACGCGGTTGCTTCCGTCTCCAGCTCTGGCCGTCACCGGAG
CATCGGGACCTCCATCTCGGACACGCTCGTCGTCGCTGCACATCCAGCCG
CCAACGGTACGGCTGTCGGTCTCATCGCGGTCGTCGGGACAAAGCCGAAG
CAGCGAACGGGCGGGCAGAGACGAGTGGCATCACAACCGGGATTCCAAGC
CAGCGGCTCAGGAGAAAAAGCGAGATGCCAGCCCAATCGGCGGAGGCAAC
GGCGGCGGCGTTGGGTTGGCGTTCGAGGTCCTCGGCCGCCAGCTCCCCCT
GCTTCCAACCGCCGCCGAACGAAAGCTGTCGTCTTCCCCGCCGGGGAACG
CTCCGGCCACCGCAGCATCGCCAATGCCGAACCCTATGGTGACAGCAGCA
CCGGGGGCGGATTCAAACACTGCAGCTACCGCCTCCGCCGCCTCCGCCGC
TGCTGCGAAAAACCCAGCCTCCGTTGTAGCCTATGGCAGCAGCAGCGTTG
CTAACGTCATGCTCAACAATCGTCGATCCTCTCGCGCGGCGGCCGTTGCG
GCGACCGTTGCCGCCGTAGCCTCCGCGAAGGCCGCCACCGATGACGCGGT
TGCTTCCGTCTCCAGCTCTGGCCGTCACCGGAGCATCGGGACCTCCATCT
CGGACACGCTCGTCGTCGCTGCACATCCAGCCGCCAACGGTACGGCTGGT
TTAGCCGGGAGTCGCTATCGTGCGTCGGCAGCAGGAGCTTGGCCAGAGCC
AGCTCCTGGGAAGCACGACGGCAGCAACGTTGAAGATCACGGGCGTGACG
TCGCGGCGGCGTTGGGCATTGAAGCCGGCGGTGATCGTCACGGACTCCTT
GGGGGCGGTAGTCGGCGGCAAGGGGACGGGCTAGCGGCGTTGACGGTGGG
AAAGGTCAACGTCGACTACAAATGGCACAAGCGTGTCGCGGAAGGCTTCA
CCGGAGTAGACGACGCAGTCGACAAGGACAAGCAAGGGGAGCGCAGGATG
TATAGCAGCGGAAGCGGCGGCGGCGATGGCAGGAACAAGGATAAGAGCAC
CGCGGAAGCCAGCGAAGATAGGATGGCGGGGAGACGGGGAGAGGAGGGCG
GAAGCGAAGGAAGAACAACGGCTTCTGAAATGGCAGTGGATGTAGGGGCA
ACAGCGGGGAAATTGCCGTGCCCTTGGTGGCAGGACTCGCAAGGAGGATT
CGTTGGAAGAGGAGGGGAGGGCGGAAGAGCAGGAGAGGGAGAGGGGGACG
GAGGAGGAGAGGACTCGCCCCCGCTGCTCGGCTCTCCAGAACCGGCTCGT
ACTGCTCAGCTAGCTCAGCTAACCTCGCCCCTGACGCATGAGGCGAAACC
CCCACATCTCCTCCCCTCCTCGTCGCGGCGATCCCCTGAAATATCGAGGC
AAAGACGACCACCAGATGCGGTCGTGGGCCAGTCGTCCCCGGTGGGGTTC
CCCGTCCGCGTCGCCGGCACCAGTAGCAATCACGGTGGTGCGAGCGCGGC
CGCTGCTCTTTCCATTTTTGTGTCGCCGGAGGTGCGCGAGACCGAGGCGA
TAGGCCCGTCAGCGGCTGCCGCTGCTTTTGATGGTCTGGACGATGGCGAT
ATATTCTCGAAGGCCGGAAGAAGCGACGGTGGCGGTGGCGACGGCGATGG
GAGTGGAGGCGGCGGCGTCGGGGGCGGCGGCGTCGGGGGCGGCGGCGCCG
GTGAGCTGGGGATGACGCGGCCTAGGACGGCCACACGTCGGTGGGATAGG
CCGGGCCCGCCGGGCGACGATGAGATCATCGGAAAGATCCTGCTTTCGAG
GGCATCCGTGACTTCGATGCTTTCCAGCAGGTTTAGCCGGGAGTCGCTAT
CGTGCGTCGGCAGCAGGAGCTTGGCCAGAGCCAGCTCCTGGGAAGCACGA
CGGCAGCAACGTTGAAGATCACGGGCGTGACGTCGCGGCGGCGTTGGGCA
TTGAAGCCGGCGGTGATCGTCACGGACTCCTTGGGGGCGGTAGTCGGCGG
CAAGGGGACGGGCTAGCGGCGTTGACGGTGGGAAAGGTCAACGTCGACTA
CAAATGGCACAAGCGTGTCGCGGAAGGCTTCACCGGAGTAGACGACGCAG
TCGACAAGGACAAGCAAGGGGAGCGCAGGATGTATAGCAGCGGAAGCGGC
GGCGGCGATGGCAGGAACAAGGATAAGAGCACCGCGGAAGCCAGCGAAGA
TAGGATGGCGGGGAGACGGGGAGAGGAGGGCGGAAGCGAAGGAAGAACAA
CGGCTTCTGAAATGGCAGTGGATGTAGGGGCAACAGCGGGGAAATTGCCG
TGCCCTTGGTGGCAGGACTCGCAAGGAGGATTCGTTGGAAGAGGAGGGGA
GGGCGGAAGAGCAGGAGAGGGAGAGGGGGACGGAGGAGGAGAGGACTCGC
CCCCGCTGCTCGGCTCTCCAGAACCGGCTCGTACTGCTCAGCTAGCTCAG
CTAACCTCGCCCCTGACGCATGAGGCGAAACCCCCACATCTCCTCCCCTC
CTCGTCGCGGCGATCCCCTGAAATATCGAGGCAAAGACGACCACCAGATG
CGGTCGTGGGCCAGTCGTCCCCGGTGGGGTTCCCCGTCCGCGTCGCCGGC
ACCAGTAGCAATCACGGTGGTGCGAGCGCGGCCGCTGCTCTTTCCATTTT
TGTGTCGCCGGAGGTGCGCGAGACCGAGGCGATAGGCCCGTCAGCGGCTG
CCGCTGCTTTTGATGGTCTGGACGATGGCGATATATTCTCGAAGGCCGGA
AGAAGCGACGGTGGCGGTGGCGACGGCGATGGGAGTGGAGGCGGCGGCGT
CGGGGGCGGCGGCGTCGGGGGCGGCGGCGCCGGTGAGCTGGGGATGACGC
GGCCTAGGACGGCCACACGTCGGTGGGATAGGCCGGGCCCGCCGGGCGAC
GATGAGATCATCGGAAAGATCCTGCTTTCGAGGGCATCCGTGACTTCGAT
GCTTTCCAGCAGGCTTACCCACCTGCGGATGCTAAGGTACGGATGGGCGG
ACGGCGACGTGTCCGGCACCATATCCAAGTTAGCGCGACTAGAGAGGCTT
ACCCACCTGCGGATGCTAAGGTACGGATGGGCGGACGGCGACGTGTCCGG
CACCATATCCAAGTTAGCGCGACTAGAGAGGTCCGTCACCCCGACCGACG
ATTCTCCCAGGGCCGTAGTAGCCGACTTCCTGTGGGTGGTGCCTCTTGAC
GGGACTCGGGTGACGCTCGAGCACTGCTTGGAGCTGATGCCTCTTCTAGA
GGGACTGTGGAAGGTCCGTCACCCCGACCGACGATTCTCCCAGGGCCGTA
GTAGCCGACTTCCTGTGGGTGGTGCCTCTTGACGGGACTCGGGTGACGCT
CGAGCACTGCTTGGAGCTGATGCCTCTTCTAGAGGGACTGTGGAAGCTGG
ACACGGAAAGCTGCGTGGCCGCCGCTACGCGCTGCCTGGAGTCGATCGTG
CGACGCTTTGGTGGCTTCGTGCGGGATACTCTCGGGGCGTCGGTCTCCGC
AGGGGGGGTCGACCTGGCTCGCGAGGACAGGATAGCGCGCTGCCGAGAGG
CTCATCGGCTGGACACGGAAAGCTGCGTGGCCGCCGCTACGCGCTGCCTG
GAGTCGATCGTGCGACGCTTTGGTGGCTTCGTGCGGGATACTCTCGGGGC
GTCGGTCTCCGCAGGGGGGGTCGACCTGGCTCGCGAGGACAGGATAGCGC
GCTGCCGAGAGGCTCATCGGGCCTTCATCCGGGGCTATCATCATCTTGAG
AGATCCGAGGGAGAGTTTTACGAGGACAGGAGGATAGCGGCGGTGGCGGG
GCGGCTGCGACCGCTGTTCGAGAGCTACTTTATGTCTTGAGCCTTCATCC
GGGGCTATCATCATCTTGAGAGATCCGAGGGAGAGTTTTACGAGGACAGG
AGGATAGCGGCGGTGGCGGGGCGGCTGCGACCGCTGTTCGAGAGCTACTT
TATGTCTTGA back to top
|