prot_P-fluviatile_contig12.1464.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig12.1464.1
Unique Nameprot_P-fluviatile_contig12.1464.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length582
Homology
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BLAST of mRNA_P-fluviatile_contig12.1464.1 vs. uniprot
Match: D8LQ05_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ05_ECTSI)

HSP 1 Score: 369 bits (948), Expect = 1.930e-118
Identity = 284/527 (53.89%), Postives = 323/527 (61.29%), Query Frame = 0 
Query:   95 AKLLGSLAAVFGMTMDSSNAWVSP-TQQPARVSRTGGA------------RQSCS---LPITRWDAQLARARDAHRRQKWAEVELWCGRVIGIADDWNALEQAHLRLALAAQKRTGVDGARRAFQQGIEDCPSSDTLLLAWALMESKVHN-ARSRKIARALLRRAVALNPKKNWRVLKWSVFAGDLNWIEAAGGAAVGVVRSALSPAVKPPVKAATPXXXXXXXXXXGQVEGSI-TRA-EQKQERGLAIELLELCRSAPSSLSSLXXXXXXXRTSLPMATAAXXXXXXXXXXXXXXXXA-PSARFEELAKELERRGDGAAERGGRELCGSWRLVFTTCGECDRVLKRTGSEVYQRLTPPITAIQSGSSSKRAAPFRCEVLLRPSPAAA--------------PLSSPSALTPTKAA-RAAVAYLLRGWADTKPGP----GGSLIQHVAPRFATVILGSGSXXXXXXXXXXXXXXXXARVPSXTPPPAVFSSLGSVSRGGRGPERLATQEVTYVGRQLRIGRTKGGDV 582
            + L G++  + G ++  + AWVSP   QP      GGA            R S S    P+TRWDAQL RAR AHR + W EV+ WC RVI +ADDWNA+EQAHLRLALAAQK +GV G RRAFQQGI DCPSSDTLL+AWALMESK+ N A SR+ A AL+RRA+ALNP KN RVL WSVFA DL   EAAG                                  G   G + TRA E+++E  LA +LL+LC S      +            P AT  XXXXXXXXXXXXXXXX  PS RF+ELA ELER+G GAA  G R L G+WRLVFTT  +C+R L RTG+EVYQRLTPPI AI+   S K+ APFRCEVLLRP+ A                PLS PS    TKAA +A VAY  RGWAD  P      G  L QHVA R       S  XXXXXXXXXXXXXX   R PS TPPPAVFS+LG V+   +G ERLATQEVTYVG+QLRIGRT  GDV
Sbjct:    3 SSLFGTVILLAGASL--TKAWVSPPAHQPRSPGAAGGAAAPSTGASPCFGRSSLSPRSKPLTRWDAQLERARSAHRVKDWTEVQHWCSRVIDLADDWNAVEQAHLRLALAAQKSSGVAGGRRAFQQGIRDCPSSDTLLVAWALMESKIKNSAHSRRRAWALIRRAIALNPNKNRRVLSWSVFAADLALAEAAGXXXXXXXXXXXXXXXXXXXXXLPEPTAAGGKGIGGAAAGGVRTRALEREEETILATKLLDLCHSNKGFQEAPEVP--------PAATXXXXXXXXXXXXXXXXXXXXPSERFQELAGELERKGGGAAA-GVRALSGTWRLVFTTSADCNRYLSRTGNEVYQRLTPPIMAIKPRPSCKQPAPFRCEVLLRPAAATTATGGGTADASYGTRPLSPPS--HGTKAAPKATVAYFFRGWADKSPPDQQREGCLLKQHVAAR-------SAXXXXXXXXXXXXXXXSLKRAPSPTPPPAVFSALGLVAARCKGLERLATQEVTYVGKQLRIGRTTEGDV 509
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1464.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ05_ECTSI1.930e-11853.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 143..269
e-value: 1.5E-7
score: 32.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 179..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:2001868..2005591 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1464.1mRNA_P-fluviatile_contig12.1464.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig12 2001868..2005591 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig12.1464.1 ID=prot_P-fluviatile_contig12.1464.1|Name=mRNA_P-fluviatile_contig12.1464.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=582bp
EFFSQGTRHTGQRHAPPCLAPGRRHTPRIERGHTRACLCHPHTHTRSKWL
TRTITPHRPPHLHHRSVERKPHARQLGHYTPTSIPLEMKMSPRRAKLLGS
LAAVFGMTMDSSNAWVSPTQQPARVSRTGGARQSCSLPITRWDAQLARAR
DAHRRQKWAEVELWCGRVIGIADDWNALEQAHLRLALAAQKRTGVDGARR
AFQQGIEDCPSSDTLLLAWALMESKVHNARSRKIARALLRRAVALNPKKN
WRVLKWSVFAGDLNWIEAAGGAAVGVVRSALSPAVKPPVKAATPPTSAGG
SGGGGQVEGSITRAEQKQERGLAIELLELCRSAPSSLSSLSSSSLFSRTS
LPMATAAVDAVAAAPAAAVATAAAPSARFEELAKELERRGDGAAERGGRE
LCGSWRLVFTTCGECDRVLKRTGSEVYQRLTPPITAIQSGSSSKRAAPFR
CEVLLRPSPAAAPLSSPSALTPTKAARAAVAYLLRGWADTKPGPGGSLIQ
HVAPRFATVILGSGSRSDGDGDGDSGAAKRAARVPSPTPPPAVFSSLGSV
SRGGRGPERLATQEVTYVGRQLRIGRTKGGDV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf