mRNA_P-fluviatile_contig12.1464.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1464.1 vs. uniprot
Match: D8LQ05_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ05_ECTSI) HSP 1 Score: 369 bits (948), Expect = 1.930e-118 Identity = 284/527 (53.89%), Postives = 323/527 (61.29%), Query Frame = 1
Query: 283 AKLLGSLAAVFGMTMDSSNAWVSP-TQQPARVSRTGGA------------RQSCS---LPITRWDAQLARARDAHRRQKWAEVELWCGRVIGIADDWNALEQAHLRLALAAQKRTGVDGARRAFQQGIEDCPSSDTLLLAWALMESKVHN-ARSRKIARALLRRAVALNPKKNWRVLKWSVFAGDLNWIEAAGGAAVGVVRSALSPAVKPPVKAATPXXXXXXXXXXGQVEGSI-TRA-EQKQERGLAIELLELCRSAPSSLSSLXXXXXXXRTSLPMATAAXXXXXXXXXXXXXXXXA-PSARFEELAKELERRGDGAAERGGRELCGSWRLVFTTCGECDRVLKRTGSEVYQRLTPPITAIQSGSSSKRAAPFRCEVLLRPSPAAA--------------PLSSPSALTPTKAA-RAAVAYLLRGWADTKPGP----GGSLIQHVAPRFATVILGSGSXXXXXXXXXXXXXXXXARVPSXTPPPAVFSSLGSVSRGGRGPERLATQEVTYVGRQLRIGRTKGGDV 1746
+ L G++ + G ++ + AWVSP QP GGA R S S P+TRWDAQL RAR AHR + W EV+ WC RVI +ADDWNA+EQAHLRLALAAQK +GV G RRAFQQGI DCPSSDTLL+AWALMESK+ N A SR+ A AL+RRA+ALNP KN RVL WSVFA DL EAAG G G + TRA E+++E LA +LL+LC S + P AT XXXXXXXXXXXXXXXX PS RF+ELA ELER+G GAA G R L G+WRLVFTT +C+R L RTG+EVYQRLTPPI AI+ S K+ APFRCEVLLRP+ A PLS PS TKAA +A VAY RGWAD P G L QHVA R S XXXXXXXXXXXXXX R PS TPPPAVFS+LG V+ +G ERLATQEVTYVG+QLRIGRT GDV
Sbjct: 3 SSLFGTVILLAGASL--TKAWVSPPAHQPRSPGAAGGAAAPSTGASPCFGRSSLSPRSKPLTRWDAQLERARSAHRVKDWTEVQHWCSRVIDLADDWNAVEQAHLRLALAAQKSSGVAGGRRAFQQGIRDCPSSDTLLVAWALMESKIKNSAHSRRRAWALIRRAIALNPNKNRRVLSWSVFAADLALAEAAGXXXXXXXXXXXXXXXXXXXXXLPEPTAAGGKGIGGAAAGGVRTRALEREEETILATKLLDLCHSNKGFQEAPEVP--------PAATXXXXXXXXXXXXXXXXXXXXPSERFQELAGELERKGGGAAA-GVRALSGTWRLVFTTSADCNRYLSRTGNEVYQRLTPPIMAIKPRPSCKQPAPFRCEVLLRPAAATTATGGGTADASYGTRPLSPPS--HGTKAAPKATVAYFFRGWADKSPPDQQREGCLLKQHVAAR-------SAXXXXXXXXXXXXXXXSLKRAPSPTPPPAVFSALGLVAARCKGLERLATQEVTYVGKQLRIGRTTEGDV 509 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1464.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1464.1 >prot_P-fluviatile_contig12.1464.1 ID=prot_P-fluviatile_contig12.1464.1|Name=mRNA_P-fluviatile_contig12.1464.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=582bp EFFSQGTRHTGQRHAPPCLAPGRRHTPRIERGHTRACLCHPHTHTRSKWLback to top mRNA from alignment at P-fluviatile_contig12:2001868..2005591+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1464.1 ID=mRNA_P-fluviatile_contig12.1464.1|Name=mRNA_P-fluviatile_contig12.1464.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3724bp|location=Sequence derived from alignment at P-fluviatile_contig12:2001868..2005591+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:2001868..2005591+ >mRNA_P-fluviatile_contig12.1464.1 ID=mRNA_P-fluviatile_contig12.1464.1|Name=mRNA_P-fluviatile_contig12.1464.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3492bp|location=Sequence derived from alignment at P-fluviatile_contig12:2001868..2005591+ (Porterinema fluviatile SAG_2381)back to top |