prot_P-fluviatile_contig12.1452.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig12.1452.1
Unique Nameprot_P-fluviatile_contig12.1452.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length971
Homology
BLAST of mRNA_P-fluviatile_contig12.1452.1 vs. uniprot
Match: D8LPZ3_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ3_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 1.350e-36
Identity = 113/211 (53.55%), Postives = 133/211 (63.03%), Query Frame = 0
Query:   97 LLLCKELRSICKIWMRNRRGILAAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVGAGQGRDXXXXXKMAKLYYHLLNEKTLKQKLTEVGLPVGGGKTAMIARHKRLALLDAASSDREVPVPRRELIRQVASWEREKDKEKLAATKAARS-----AAGGTLSSPVAPTPASGASAADESVGDSAPPQEKVVIPKEMQAGFSALIANAR 302
            L L KELRSIC  W  NRR ILAAA+A  XXXXXXXXXXXX               A+GAGQGR        A ++YH LN+  +K  L  VGLPVGGGK AM+ARHKRL LL AAS+DREVP+P+ +L+RQVA+WEREKDKE++A  K AR+     +AG    S  A  PA              P  EK+VI KEM+ GFSALIA+AR
Sbjct:    2 LQLSKELRSICTTWKHNRRAILAAANASAXXXXXXXXXXXXREQPAPSGRRKVC--AIGAGQGRVGDGGVVKA-VHYHSLNDSKMKALLIRVGLPVGGGKAAMVARHKRLVLLSAASNDREVPLPKAQLLRQVAAWEREKDKERMANAKTARAGLVSGSAGSGGGSRQALRPAGTGGXXXXXXXXXXPESEKIVISKEMKDGFSALIASAR 209          
BLAST of mRNA_P-fluviatile_contig12.1452.1 vs. uniprot
Match: A0A6H5JRB6_9PHAE (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRB6_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 1.380e-18
Identity = 154/493 (31.24%), Postives = 207/493 (41.99%), Query Frame = 0
Query:  394 GSDMRILGVAGRMVRTHGPWRCVFSRGELPLPLEGENRSNDATXXXXXXXXXXXXXXXXXXCAPSHKAPGMPFSVQTYGAEEKPDEALLAS------KNKSASSIG----RPSGSSSSNSSGGDGSTPSRGQVQVQGGQSAVVEADSRSDDGGHDGSGPA-GRGGDKKDVLTAEALKG--EGLLYLNTVTGESRREPPLELVARAEEAENAGEYLVFVPHCRFIAAAXXXXXXTPVADSS----ACAFGSNEARATVDG----------------------------ARVA-AAAAVGAAADNVLQSTIGELRSCAREGADFEGQAAVSPRRGSARRQLLGARTPPTASKPGAASSSSSTPFGSSRNGSGSGSRCAGG---------------------ETRERLASLDMIDLSQGEVTAAAVDFEKAGIGSECGGGGVGGDGEGXXXXXXXXXXXSVERASGSGAAMWACEACTLLNKARRTTCLVCAASRP 819
            G    ILGVAGR+VRT GPWRC+FS+G  P    GE R+N            XXXXXXXXX      A  M    +T G +   + AL ++      +N   +S G      SG  ++ + GGDG + S+   ++     +VV A +     G  GSG    RGG +++        G  +G +YLNT T E+ REPP ELVA A++AE+AG+YLVFVP  RF+AAA         + +S    A AF    +   V+                             AR++ A +AVGAA +    +      SC+                       +G    P   + G    +  T  GS    S + S  A                        T +RL+SL  IDLSQG V +A +D E AG        G GG+                   + + A  W C ACTL NKARRTTC +C  SRP
Sbjct:  266 GDAAEILGVAGRLVRTRGPWRCIFSQGRQPSASVGEVRNNGTAEAAAAAGVMXXXXXXXXXXXXXXAAGVM---RRTEGCKSAGERALRSAGGYGVERNGGCASNGVGESNGSGVGAAATVGGDGRSGSKTTQEL-----SVVAAAAEDGRAGFGGSGEGRDRGGGQEEAARPVREPGADQGPVYLNTATMETVREPPAELVALADQAESAGDYLVFVPSHRFVAAAAGAVPAPASSHNSNVAAAPAFSHCSSNMDVESNXXXXXXXXXXXXXXXXXXXXXXAAVTVARMSEATSAVGAAGEREQPAVTAASESCSPXXXXXXXXXXXXXXXXXXXXXXVG----PNPRRNGRGEQAQDTQQGSPLEASTTLSTVAKAVLGXXXXXXXXXXXXXXXXXXXTWDRLSSLPTIDLSQG-VASAPLDVENAG--------GTGGN------------------KAVTVATTWTCVACTLTNKARRTTCELCGTSRP 719          
BLAST of mRNA_P-fluviatile_contig12.1452.1 vs. uniprot
Match: D8LPZ5_ECTSI (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ5_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 5.940e-9
Identity = 97/299 (32.44%), Postives = 128/299 (42.81%), Query Frame = 0
Query:  572 ESRREPPLELVARAEEAENAGEYLVFVPHCRFIAAAXXXXXXT-----------PV-----------------ADSSACAFGSN---EARATVDGARVA-AAAAVGAAADNVLQSTIGELRSCAREGADFEGQAAVSPRR-----------GSARRQLLGARTPPTASKPGAASSSSSTPFGSSRNGSGSGSRCAGGE--------TRERLASLDMIDLSQGEVTAAAVDFEKAGIGSECGGGGVGGDGEGXXXXXXXXXXXSVERASGSGAAMWACEACTLLNKARRTTCLVCAASRP 819
            E+ REPP ELVA A++AE+AG+YLVFVP  RF+AAA      +           PV                 A +SA +  SN   ++ A V  AR++ AA+AV AAA+ VLQ+      SC+                            + RR   G +   T  + G    +S+TP   ++   G                 T +RL+SL  IDLSQG V +A VD E         GGG GG+                   + + A  W C ACTL NK+RRTTC VC  SRP
Sbjct:    2 ETAREPPAELVALADQAESAGDYLVFVPSHRFVAAAAGAVPASASSRNSNVAAAPVFSHRSSNMDVDGNGSNPAAASALSHNSNMDTDSNAAVTVARMSEAASAVVAAAERVLQAVTAAGESCSPXXXXXXXXXXXXXXXXXXXXXXXXXGSNTRRNSRGEQAQDT--QQGLPLEASTTPSTVAKAVLGXXXXXXXXXXXXXXXXGTWDRLSSLPTIDLSQG-VASAPVDVEN--------GGGAGGN------------------KAVTVATTWTCVACTLTNKSRRTTCEVCGTSRP 271          
BLAST of mRNA_P-fluviatile_contig12.1452.1 vs. uniprot
Match: A0A3M7NDG4_9EURO (Postreplication repair E3 ubiquitin-protein ligase RAD18 (Fragment) n=1 Tax=Chaetothyriales sp. CBS 132003 TaxID=2249419 RepID=A0A3M7NDG4_9EURO)

HSP 1 Score: 60.5 bits (145), Expect = 5.130e-6
Identity = 56/220 (25.45%), Postives = 87/220 (39.55%), Query Frame = 0
Query:   43 IESLLRCAICGGISDPPVSLPCCQQTFCSLCIRQYLDSTTPRCPCCRKASASNQLLLCKELRSICKIWMRNRRGILAAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------LAVGAGQ----GRDXXXXXKMAKLYYHLLNEKTLKQKLTEVGLPVGGGKTAMIARHKRLALLDAASSDREVPVPRRELIRQVASWER 234
            IES LRC +C      P+ +  C  TFCSLCIR+YL S   +CP CR+     +L     ++ +   ++  R G+L  A A                                                    L + AG             ++  + Y+LLNE  L+ KL ++G+   G +  M  RH     L  A+ D +  + +R+L+RQ+ +WER
Sbjct:   22 IESSLRCQVCKDFYTTPM-MTSCSHTFCSLCIRRYL-SQEGKCPACREPDQEIRLRRNWAVQELVAGFVEARDGLLGFARAMAAGKADATAVYEDEPQPDGFVACPSCSRRIKEAVINAHLDRCLSGTAAPQPLQIQAGTLVYAQNKPSSMSRLPTINYNLLNESKLRSKLRDLGIRSTGSRELMSKRHTEWVNLWNANCDSQQQLSKRDLLRQLDTWER 239          
BLAST of mRNA_P-fluviatile_contig12.1452.1 vs. uniprot
Match: A0A369JX04_HYPMA (Postreplication repair E3 ubiquitin-protein ligase RAD18 n=1 Tax=Hypsizygus marmoreus TaxID=39966 RepID=A0A369JX04_HYPMA)

HSP 1 Score: 58.2 bits (139), Expect = 5.070e-5
Identity = 32/88 (36.36%), Postives = 44/88 (50.00%), Query Frame = 0
Query:   31 YPKAGLGPAFASIESLLRCAICGGISDPPVSLPCCQQTFCSLCIRQYLDSTTPRCPCCRKASASNQLLLCKELRSICKIWMRNRRGIL 118
            +P     P   +++S LRC ICG + D PV+LPC    FCS+C+R  +      CP CRKA+    L     L  +   W  +R  IL
Sbjct:   15 FPPLADAPGLRTLDSSLRCTICGELFDAPVTLPC-GHCFCSVCVRAAMG-IKQECPTCRKATLEGHLRPNPVLEEVVAAWGLSRPYIL 100          
BLAST of mRNA_P-fluviatile_contig12.1452.1 vs. uniprot
Match: A0A6G1HD03_9PEZI (Postreplication repair E3 ubiquitin-protein ligase RAD18 n=1 Tax=Aulographum hederae CBS 113979 TaxID=1176131 RepID=A0A6G1HD03_9PEZI)

HSP 1 Score: 57.8 bits (138), Expect = 7.890e-5
Identity = 28/60 (46.67%), Postives = 39/60 (65.00%), Query Frame = 0
Query:   38 PAFASIESLLRCAICGGISDPPVSLPCCQQTFCSLCIRQYLDSTTPRCPCCRKASASNQL 97
            PAFA+++S LRC +C    D P+ +  C  TFCSLCIRQ L S   +CP CR +  +++L
Sbjct:   19 PAFAALDSALRCQVCKDFYDTPM-ITSCSHTFCSLCIRQCL-SAEGKCPACRASDQTSKL 76          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LPZ3_ECTSI1.350e-3653.55SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JRB6_9PHAE1.380e-1831.24RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
D8LPZ5_ECTSI5.940e-932.44RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
A0A3M7NDG4_9EURO5.130e-625.45Postreplication repair E3 ubiquitin-protein ligase... [more]
A0A369JX04_HYPMA5.070e-536.36Postreplication repair E3 ubiquitin-protein ligase... [more]
A0A6G1HD03_9PEZI7.890e-546.67Postreplication repair E3 ubiquitin-protein ligase... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 222..242
NoneNo IPR availableGENE3D2.20.28.140coord: 789..842
e-value: 4.5E-9
score: 37.9
NoneNo IPR availablePANTHERPTHR14134:SF2E3 UBIQUITIN-PROTEIN LIGASE RAD18coord: 168..340
NoneNo IPR availablePANTHERPTHR14134:SF2E3 UBIQUITIN-PROTEIN LIGASE RAD18coord: 39..130
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 40..114
IPR003034SAP domainSMARTSM00513sap_9coord: 173..207
e-value: 0.0013
score: 28.0
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 793..817
e-value: 6.6E-6
score: 35.6
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 795..814
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 789..820
score: 9.518
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 39..117
e-value: 4.4E-12
score: 47.5
IPR039577E3 ubiquitin-protein ligase Rad18PANTHERPTHR14134E3 UBIQUITIN-PROTEIN LIGASE RAD18coord: 39..130
IPR039577E3 ubiquitin-protein ligase Rad18PANTHERPTHR14134E3 UBIQUITIN-PROTEIN LIGASE RAD18coord: 168..340
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 49..89
score: 10.306
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 792..818

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:1868613..1876536 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1452.1mRNA_P-fluviatile_contig12.1452.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig12 1868016..1876917 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig12.1452.1 ID=prot_P-fluviatile_contig12.1452.1|Name=mRNA_P-fluviatile_contig12.1452.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=971bp
MSASVASGGPAVAGAEEQQLDEQDDDEIYQYPKAGLGPAFASIESLLRCA
ICGGISDPPVSLPCCQQTFCSLCIRQYLDSTTPRCPCCRKASASNQLLLC
KELRSICKIWMRNRRGILAAADASSEAAGGAAAVAAAPEAASDVSSGRRR
VLAVGAGQGRDGGGGGKMAKLYYHLLNEKTLKQKLTEVGLPVGGGKTAMI
ARHKRLALLDAASSDREVPVPRRELIRQVASWEREKDKEKLAATKAARSA
AGGTLSSPVAPTPASGASAADESVGDSAPPQEKVVIPKEMQAGFSALIAN
ARKNAKKRPSASSSGAEGSSGGGGSKKARVSQESGRNTVGGGGGHSSGGT
DAGGVGSTFSNGIASDGGGLSNGYSADGFPVPAAASGGSSAGDGSDMRIL
GVAGRMVRTHGPWRCVFSRGELPLPLEGENRSNDATAAAAAAAPVVAAAP
AAAACAPSHKAPGMPFSVQTYGAEEKPDEALLASKNKSASSIGRPSGSSS
SNSSGGDGSTPSRGQVQVQGGQSAVVEADSRSDDGGHDGSGPAGRGGDKK
DVLTAEALKGEGLLYLNTVTGESRREPPLELVARAEEAENAGEYLVFVPH
CRFIAAAAAAAAATPVADSSACAFGSNEARATVDGARVAAAAAVGAAADN
VLQSTIGELRSCAREGADFEGQAAVSPRRGSARRQLLGARTPPTASKPGA
ASSSSSTPFGSSRNGSGSGSRCAGGETRERLASLDMIDLSQGEVTAAAVD
FEKAGIGSECGGGGVGGDGEGIGDGGTDGAGESVERASGSGAAMWACEAC
TLLNKARRTTCLVCAASRPNGFKPPQRASQAPPSLDSLSGANRRLAGSGS
TLRLPRSRTGGSTPQSTITSFASRPASKPADVTGMGKSTGGGSGCVQTTS
SSPAAAVTSSTAGDALCRQSPQATSTSLPPINPTAVLADGFPTVRSPDCA
LPPGSAPAAAPAPEKPQQPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR001876Znf_RanBP2
IPR013083Znf_RING/FYVE/PHD
IPR039577Rad18
IPR001841Znf_RING
IPR036443Znf_RanBP2_sf