prot_P-fluviatile_contig12.1443.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig12.1443.1
Unique Nameprot_P-fluviatile_contig12.1443.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length447
Homology
BLAST of mRNA_P-fluviatile_contig12.1443.1 vs. uniprot
Match: D8LDE8_ECTSI (RNA pseudouridylate synthase domain-containing protein (C-terminal) RNA pseudouridylate synthase dom n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE8_ECTSI)

HSP 1 Score: 463 bits (1191), Expect = 2.490e-157
Identity = 283/390 (72.56%), Postives = 308/390 (78.97%), Query Frame = 0
Query:   59 KDPFMMRLSRRIARSGIASRREAERLIEEGVVTVNGAPVQTPARNVGPRDIVKVKVGNSLRRVEFASSLNTVGGKTLDSVEDHTPKLWMVHKTRNELVSRNDPKGRPTVFDRLAKLKLPDTLMPIGRLDYNTEGLLLLTNDGNLARKMELPISNIVRTYSVRVYGNITEEKLRAMRNGCTIEGVRYNGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLRLTVNRLARTRYGPFSLGKVRSGGVARVEIPKSFMRRLEEATAAGSPEIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKDGDAPTGGGWDSSSSRGTGRDVRN-GGAYTSRGGGGIARSATGAWGKKA-IRIRKGVGAPMSRGDYAARLKAQRRAR 446
            KDP +MRLSRRIARSGIASRREAER++E GVV VNGA VQTPA NVGPRDIVKV VG   +          V GK L+  E HTPKLWMVHK RNELV+R+DP+GRPTVFDRL KLKLPDTLMP+GRLDYNTEGLLLLTNDG+LARKMELP SNIVRTYSVRVYGNITEEKLRAMR+GCTI+GVRY GMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYL LTVNRLARTRYGPFSLGKVR+GGVA VEIPK+FMRRLE+    GSP  GG XXXXXXXXXXXXXXXXXXX               +  +P   G   S++ G GRD  +  G+   R  GG  R A  +WG+K   RIRKGVGAPMSRGD +AR  AQ+RAR
Sbjct:  108 KDPSVMRLSRRIARSGIASRREAERMVEAGVVMVNGATVQTPALNVGPRDIVKVNVGLFQQPGNGTDCFTFVQGKVLERPESHTPKLWMVHKMRNELVTRHDPEGRPTVFDRLTKLKLPDTLMPVGRLDYNTEGLLLLTNDGDLARKMELPSSNIVRTYSVRVYGNITEEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAAVEIPKAFMRRLEDG--GGSP--GGAXXXXXXXXXXXXXXXXXXXNGMRREMEAGGMKVSEVSSP---GTGLSNTVGGGRDTGDRAGSSGGRHWGGGFRGAGRSWGEKGGPRIRKGVGAPMSRGDNSARPTAQQRAR 490          
BLAST of mRNA_P-fluviatile_contig12.1443.1 vs. uniprot
Match: A0A6H5J9J6_9PHAE (S4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9J6_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 2.220e-77
Identity = 135/190 (71.05%), Postives = 151/190 (79.47%), Query Frame = 0
Query:   53 LEAQQMKDPFMMRLSRRIARSGIASRREAERLIEEGVVTVNGAPVQTPARNVGPRDIVKVKVGNSLR-----------RVEFASSL-------NTVGGKTLDSVEDHTPKLWMVHKTRNELVSRNDPKGRPTVFDRLAKLKLPDTLMPIGRLDYNTEGLLLLTNDGNLARKMELPISNIVRTYSVRVYGN 224
            L   ++KDP +MRLSRRIARSGIASRREAER++E GVV VNGA VQTPA NVGPRDIVKV VG  L+           +V+F + L       +T  GK L+  E HTPKLWMVHK RNELV+R+DP+GRPTVFDRLAKLKLPDTLMP+GRLDYNTEGLLLLTNDG+LARKMELP SNIVRTYSVRVYGN
Sbjct:  102 LPPPKIKDPSVMRLSRRIARSGIASRREAERMVEAGVVMVNGATVQTPALNVGPRDIVKVNVGLFLQLGNGADYRFFVQVDFDALLLCLSYLSDTALGKVLERPESHTPKLWMVHKMRNELVTRDDPEGRPTVFDRLAKLKLPDTLMPVGRLDYNTEGLLLLTNDGDLARKMELPSSNIVRTYSVRVYGN 291          
BLAST of mRNA_P-fluviatile_contig12.1443.1 vs. uniprot
Match: A0A835ZDT5_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT5_9STRA)

HSP 1 Score: 243 bits (620), Expect = 8.440e-72
Identity = 141/320 (44.06%), Postives = 187/320 (58.44%), Query Frame = 0
Query:   32 GQGDNILDQSAVATTDCDTDMLEAQQM-----KDPFMMRLSRRIARSGIASRREAERLIEEGVVT--------------VNGAPVQTPARNVGPRDIVKVKVGNSLRRVEFASSLNTVGGKTLDSVEDHTPKLWMVHKTRNELVSRNDPKGRPTVFDRLAKLKLPDTLMPIGRLDYNTEGLLLLTNDGNLARKMELPISNIVRTYSVRVYGNITEEKLRAMRNGCTIEGVRYNGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLRLTVNRLARTRYGPFSLGKVRSGGVARVEIPKSFMRRLEEATAAGSP 332
            G+   +L++  V   +   +  E Q       K   +MRL++RIARSG +SRREAERLI+EG V               +NGA   +PA NV   D V+V                   GK L S      ++W VHK R ELV+R+D KGR  V +R+  + L D L P+GRLD+ TEGLLLLT+DG+LARK+E P   + R Y VRV+G++T EKLR M+ GC IEGV Y GM V ++ G     E  N WL + C EGKN QIR++C++L LTVNRL RT +GPF LGK+ SGGVA V + + F++++  A   G P
Sbjct:    3 GRASKVLEEGVVNGGNSGEEHAELQPQRQRTRKQHEVMRLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVD------------------GKEL-STHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRG-----EKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVPLHEQFLKQVNTAMETGVP 298          
BLAST of mRNA_P-fluviatile_contig12.1443.1 vs. uniprot
Match: A0A7C5SFA6_9PROT (Pseudouridine synthase n=1 Tax=Thermopetrobacter sp. TaxID=2268141 RepID=A0A7C5SFA6_9PROT)

HSP 1 Score: 202 bits (515), Expect = 5.740e-59
Identity = 125/275 (45.45%), Postives = 160/275 (58.18%), Query Frame = 0
Query:   65 RLSRRIARSGIASRREAERLIEEGVVTVNGAPVQTPARNVGPRDIVKVKVGNSLRRVEFASSLNTVGGKTLDSVEDHTPKLWMVHKTRNELVSRNDPKGRPTVFDRLAKLKLPDTL---MPIGRLDYNTEGLLLLTNDGNLARKMELPISNIVRTYSVRVYGNITEEKLRAMRNGCTIEGVRYNGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLRLTVNRLARTRYGPFSLGKVRSGGVARVEIPKSFMRRLEEATAAGSPEIGG 336
            RL+RRIAR+G+ SRR AE LI EG V VNG  V TPA NV   D+V                   V G  L S      +LW  HK    +VS  D KGRPTVF+RL     P  L   + +GRLD N+EGLLLLTNDG LAR++ELP +   R Y VR +G +T++ L A+R+G TI+GV Y  +  +++       EG N W+T    EGKNR+IR+IC++L L VNRL RT YGPF LG+++ G +A V       R+L E   A   +IGG
Sbjct:    7 RLARRIARAGVCSRRAAEELIREGRVMVNGETVTTPAVNVTADDVV------------------VVDGAPLPSPAP--VRLWRYHKPCGLIVSERDEKGRPTVFERL-----PGDLGRVISVGRLDLNSEGLLLLTNDGALARRLELPATGWTRRYRVRAFGCVTQDALAALRDGLTIDGVHYGKIVAKLDTA-----EGANVWMTFALKEGKNREIRRICEHLGLKVNRLIRTAYGPFQLGRLKRGALAEVSP-----RQLREQLGAIWRDIGG 246          
BLAST of mRNA_P-fluviatile_contig12.1443.1 vs. uniprot
Match: A0A2E7QVJ7_9PROT (Pseudouridine synthase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7QVJ7_9PROT)

HSP 1 Score: 202 bits (513), Expect = 2.990e-58
Identity = 113/258 (43.80%), Postives = 158/258 (61.24%), Query Frame = 0
Query:   58 MKDPFMM--RLSRRIARSGIASRREAERLIEEGVVTVNGAPVQTPARNVGPRDIVKVKVGNSLRRVEFASSLNTVGGKTLDSVEDHTPKLWMVHKTRNELVSRNDPKGRPTVFDRLAKLKLPDTLMPIGRLDYNTEGLLLLTNDGNLARKMELPISNIVRTYSVRVYGNITEEKLRAMRNGCTIEGVRYNGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLRLTVNRLARTRYGPFSLGKVRSGGVARV 313
            MKDP     R+++R++RSGI SRREAER + +G VTV+G  +  PA  V  + I+                  TV GK +   E   PKLW  HK R  L + +DP+ RPTVFD L K  LP  ++ +GRLD+N+EGLLLLTNDG LAR +ELP +  +R Y VR YG + E +L ++  G T++G++Y G+  +++      R+G N+W+T+   EGKNR+IRK+ +Y+ L VNRL R  YGPF LG++    V  V
Sbjct:    1 MKDPKKKGERIAKRLSRSGICSRREAERWLADGRVTVDGEQISKPATLVTDQSII------------------TVDGKRIAQPEQ--PKLWRYHKPRGVLSTNSDPENRPTVFDHLPK-NLPRVML-VGRLDFNSEGLLLLTNDGELARSLELPSTGWIRQYRVRAYGPLDESRLVSLAGGITVDGIKYQGIQAQLDK-----RQGDNSWITVSLQEGKNREIRKVMEYIGLRVNRLIRIAYGPFQLGELHRDAVREV 231          
BLAST of mRNA_P-fluviatile_contig12.1443.1 vs. uniprot
Match: UPI0019C5EFD9 (rRNA pseudouridine synthase n=1 Tax=Kordiimonas sediminis TaxID=1735581 RepID=UPI0019C5EFD9)

HSP 1 Score: 204 bits (518), Expect = 3.610e-58
Identity = 118/276 (42.75%), Postives = 170/276 (61.59%), Query Frame = 0
Query:   65 RLSRRIARSGIASRREAERLIEEGVVTVNGAPVQTPARNVGPRDIVKVKVGNSLRRVEFASSLNTVGGKTLDSVEDHTPKLWMVHKTRNELVSRNDPKGRPTVFDRLAKLKLPDTL---MPIGRLDYNTEGLLLLTNDGNLARKMELPISNIVRTYSVRVYGNITEEKLRAMRNGCTIEGVRYNGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLRLTVNRLARTRYGPFSLGKVRSGGVARV------EIPKSFMRRLEEATAAGS 331
            R+++ +AR+G+ SRR+ ER+I +G +TVNG  ++TPA  V           +SL+ +       TV G  + SV D   +LW +HK +  L +  DP+GRPTVFD+L     PD L   + +GRLD NTEGLLLLTNDG LAR +ELP + +VR Y VRVYG++ E  L+ +++G TI+GV Y  +   +E GG       N+WL++   EGKNR++R++ ++L LTVNRL RT YGPFS+G +  G VA V      ++  +F R  + +  A S
Sbjct:   21 RIAKALARAGVGSRRDIERMITDGRITVNGEILKTPAVLV-----------DSLKGI-------TVDGNEIASVSD--TRLWRMHKRKGTLTTHKDPEGRPTVFDQL-----PDRLGRVISVGRLDMNTEGLLLLTNDGELARWLELPQNEVVRRYRVRVYGHVRENDLKKLKDGVTIDGVHYGSIDAVLEQGGAA-----NSWLSVAIREGKNREVRRVMEHLGLTVNRLIRTHYGPFSIGTLNPGAVAEVSNKQLHDMLAAFFREEKSSLVAPS 266          
BLAST of mRNA_P-fluviatile_contig12.1443.1 vs. uniprot
Match: A0A7Y0HI03_9PROT (Pseudouridine synthase n=1 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0HI03_9PROT)

HSP 1 Score: 204 bits (519), Expect = 4.920e-58
Identity = 118/264 (44.70%), Postives = 162/264 (61.36%), Query Frame = 0
Query:   60 DPFMMRLSRRIARSGIASRREAERLIEEGVVTVNGAPVQTPARNVGPRDIVKVKVGNSLRRVEFASSLNTVGGKTLDSVEDHTPKLWMVHKTRNELVSRNDPKGRPTVFDRLAKLKLPDTLMPIGRLDYNTEGLLLLTNDGNLARKMELPISNIVRTYSVRVYGNITEEKLRAMRNGCTIEGVRYNGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLRLTVNRLARTRYGPFSLGKVRSGGVARVEIPKSFMRRL 323
            D    RL++RIAR+G+ SRR+AER IE G V VNG  V++PA NVGP D V                  TV GK L   E+   +LW  HK    +VS  D KGR T+F++L + ++P  ++ +GRLD N+EGLLLLTNDG+LARK+ELP +  VR Y VRV+G +   +L ++ +G T+EGVRY  +   +E      ++G NAW+++  TEGKNR++RK+ ++L   VNRL R  YGPF LG +  G V   E+    MR L
Sbjct:   20 DTTGQRLAKRIARAGLCSRRDAERWIETGRVAVNGVVVESPALNVGPSDTV------------------TVDGKDLP--EEQAARLWRYHKPAGLVVSARDEKGRATIFEKLPR-EMP-RVVSVGRLDLNSEGLLLLTNDGDLARKLELPATGWVRRYRVRVHGRVDPARLASLEHGVTVEGVRYGSIRAELEK-----QQGSNAWVSVALTEGKNREVRKVMEHLGYPVNRLLRLSYGPFQLGPLPRGMVE--EVSAKVMRDL 254          
BLAST of mRNA_P-fluviatile_contig12.1443.1 vs. uniprot
Match: A0A4S3MB58_9RHOB (Pseudouridine synthase n=1 Tax=Youngimonas vesicularis TaxID=1294297 RepID=A0A4S3MB58_9RHOB)

HSP 1 Score: 204 bits (519), Expect = 4.920e-58
Identity = 119/249 (47.79%), Postives = 157/249 (63.05%), Query Frame = 0
Query:   65 RLSRRIARSGIASRREAERLIEEGVVTVNGAPVQTPARNVGPRDIVKVKVGNSLRRVEFASSLNTVGGKTLDSVEDHTPKLWMVHKTRNELVSRNDPKGRPTVFDRLAKLKLPDTLMPIGRLDYNTEGLLLLTNDGNLARKMELPISNIVRTYSVRVYGNITEEKLRAMRNGCTIEGVRYNGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLRLTVNRLARTRYGPFSLGKVRSGGVARV 313
            R+++ IARSG ASRREAE+LI EG VTVNGA + +PA NV PRD +                  TV G+ L + E   P+LW+ HK    + +  D +GR T+FD+L +  LP  +M +GRLD N+EGLLLLTNDG + RK+ELP +  +R Y VRV G +TEE L  +R G T EGV Y  M V ++      ++G NAWLT+   EGKNR+IR+  + + LTVNRL RT YGPF LG+++ G V  V
Sbjct:   10 RIAKIIARSGRASRREAEKLIAEGRVTVNGAQIDSPALNVTPRDRI------------------TVDGQPLAAAEP--PRLWLYHKPAGLVTTTRDEQGRDTIFDKLPE-DLP-RVMSVGRLDLNSEGLLLLTNDGEVKRKLELPSTGWLRKYRVRVNGKVTEEILEPLRKGITHEGVTYQPMIVSLDR-----QQGANAWLTVGLREGKNREIRRAMEAINLTVNRLIRTSYGPFLLGQLKPGEVEEV 231          
BLAST of mRNA_P-fluviatile_contig12.1443.1 vs. uniprot
Match: A0A6I4UPS4_9SPHN (Pseudouridine synthase n=1 Tax=Croceibacterium soli TaxID=1739690 RepID=A0A6I4UPS4_9SPHN)

HSP 1 Score: 200 bits (509), Expect = 2.230e-57
Identity = 120/281 (42.70%), Postives = 163/281 (58.01%), Query Frame = 0
Query:   57 QMKDPFMMRLSRRIARSGIASRREAERLIEEGVVTVNGAPVQTPARNVGPRDIVKVKVGNSLRRVEFASSLNTVGGKTLDSVEDHTPKLWMVHKTRNELVSRNDPKGRPTVFDRLAKLKLPDT--LMPIGRLDYNTEGLLLLTNDGNLARKMELPISNIVRTYSVRVYGNITEEKLRAMRNGCTIEGVRYNGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLRLTVNRLARTRYGPFSLGKVRSGGVARVEIPKSFMRRLEEATAAGSPEIG 335
            Q + P   R+++ +AR+G+ASRRE ER+I EG V +NGA +QT A  V            +LR V       TV G  + S E    +L+  HK    L +  DPKGRPT+++ LA     D   LMP+GRLD NTEGLLLLTNDG L R MELP S + RTY  R +G +++ +L ++ +G TIEGVRY  +   +E      R GRN W+ +  TEGKNR++R++ ++L L V+RL RT YGPF LG +  G  A  E+ K  + R +      SP  G
Sbjct:    3 QGEKPEGERIAKLLARAGVASRREVERMIAEGRVALNGATLQTSATIVP-----------NLRGV-------TVDGNPVGSAE--RTRLYRFHKPAGLLTAERDPKGRPTIYNALANALPKDAPRLMPVGRLDLNTEGLLLLTNDGELKRAMELPASEVPRTYRARTFGEVSQAQLESLMDGITIEGVRYGPIDANLER-----RTGRNQWIELTLTEGKNREVRRVLEHLGLQVSRLLRTSYGPFELGDLPKG--AAEEVKKHELERFQSTLKKSSPARG 256          
BLAST of mRNA_P-fluviatile_contig12.1443.1 vs. uniprot
Match: UPI0018831775 (rRNA pseudouridine synthase n=1 Tax=Kordiimonas pumila TaxID=2161677 RepID=UPI0018831775)

HSP 1 Score: 201 bits (510), Expect = 3.820e-57
Identity = 111/249 (44.58%), Postives = 156/249 (62.65%), Query Frame = 0
Query:   65 RLSRRIARSGIASRREAERLIEEGVVTVNGAPVQTPARNVGPRDIVKVKVGNSLRRVEFASSLNTVGGKTLDSVEDHTPKLWMVHKTRNELVSRNDPKGRPTVFDRLAKLKLPDTLMPIGRLDYNTEGLLLLTNDGNLARKMELPISNIVRTYSVRVYGNITEEKLRAMRNGCTIEGVRYNGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLRLTVNRLARTRYGPFSLGKVRSGGVARV 313
            R+++ +AR+GIASRRE ER+I +G V+V+G  + TPA  V   D +KV                   G+ +  V +   KLW +HK R  L +  DP+GRPTVF++L        ++ +GRLD NTEGLLLLTNDG LAR +ELP + ++R Y VRV+G + E  L +++NG TIEG  Y  +   +E    + +EG NAW+T+   EGKNR++R++ ++L L VNRL RT YGPFSLG +  G VA+V
Sbjct:   17 RIAKALARAGIASRREVERMIADGRVSVDGKKLDTPAFLVTTLDGIKVD------------------GEAITQVSE--TKLWRMHKRRGTLTTHRDPEGRPTVFEKLPTHM--GRVISVGRLDMNTEGLLLLTNDGELARWLELPKNEVIRRYRVRVHGRVDERILASLKNGLTIEGTHYGSIEASLE----RQQEGANAWVTVAIREGKNREVRRVMEHLGLAVNRLIRTHYGPFSLGTLTDGTVAQV 239          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1443.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDE8_ECTSI2.490e-15772.56RNA pseudouridylate synthase domain-containing pro... [more]
A0A6H5J9J6_9PHAE2.220e-7771.05S4 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A835ZDT5_9STRA8.440e-7244.06Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A7C5SFA6_9PROT5.740e-5945.45Pseudouridine synthase n=1 Tax=Thermopetrobacter s... [more]
A0A2E7QVJ7_9PROT2.990e-5843.80Pseudouridine synthase n=1 Tax=Rhodospirillaceae b... [more]
UPI0019C5EFD93.610e-5842.75rRNA pseudouridine synthase n=1 Tax=Kordiimonas se... [more]
A0A7Y0HI03_9PROT4.920e-5844.70Pseudouridine synthase n=1 Tax=Pacificispira spong... [more]
A0A4S3MB58_9RHOB4.920e-5847.79Pseudouridine synthase n=1 Tax=Youngimonas vesicul... [more]
A0A6I4UPS4_9SPHN2.230e-5742.70Pseudouridine synthase n=1 Tax=Croceibacterium sol... [more]
UPI00188317753.820e-5744.58rRNA pseudouridine synthase n=1 Tax=Kordiimonas pu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 64..126
e-value: 5.5E-12
score: 55.8
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 64..110
e-value: 1.1E-10
score: 41.1
IPR002942RNA-binding S4 domainPROSITEPS50889S4coord: 64..128
score: 13.165
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 145..282
e-value: 4.6E-12
score: 46.3
IPR042092Pseudouridine synthase, RsuA/RluB/E/F, catalytic domainGENE3D3.30.70.1560coord: 208..303
e-value: 6.5E-43
score: 148.4
NoneNo IPR availableGENE3D3.30.70.580coord: 146..309
e-value: 6.5E-43
score: 148.4
NoneNo IPR availablePANTHERPTHR21600:SF2RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 62..314
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 62..314
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 62..186
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 63..117
e-value: 1.2E-16
score: 61.8
IPR000748Pseudouridine synthase, RsuA/RluB/E/FTIGRFAMTIGR00093TIGR00093coord: 149..310
e-value: 2.3E-36
score: 123.0
IPR018496Pseudouridine synthase, RsuA/RluB/E/F, conserved sitePROSITEPS01149PSI_RSUcoord: 184..198
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 144..304

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:1734389..1737979 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1443.1mRNA_P-fluviatile_contig12.1443.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig12 1734389..1737979 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig12.1443.1 ID=prot_P-fluviatile_contig12.1443.1|Name=mRNA_P-fluviatile_contig12.1443.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=447bp
GAARGVGDVPGTEENAFEDKNDDDDDDDDDEGQGDNILDQSAVATTDCDT
DMLEAQQMKDPFMMRLSRRIARSGIASRREAERLIEEGVVTVNGAPVQTP
ARNVGPRDIVKVKVGNSLRRVEFASSLNTVGGKTLDSVEDHTPKLWMVHK
TRNELVSRNDPKGRPTVFDRLAKLKLPDTLMPIGRLDYNTEGLLLLTNDG
NLARKMELPISNIVRTYSVRVYGNITEEKLRAMRNGCTIEGVRYNGMFVR
VEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLRLTVNRLARTRYGPF
SLGKVRSGGVARVEIPKSFMRRLEEATAAGSPEIGGGGGGGGGNRRRVGP
GPGTGRRRESEAGAAVSISHKDGDAPTGGGWDSSSSRGTGRDVRNGGAYT
SRGGGGIARSATGAWGKKAIRIRKGVGAPMSRGDYAARLKAQRRAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002942S4_RNA-bd
IPR006145PsdUridine_synth_RsuA/RluA
IPR042092PsdUridine_s_RsuA/RluB/E/F_cat
IPR036986S4_RNA-bd_sf
IPR000748PsdUridine_synth_RsuA/RluB/E/F
IPR018496PsdUridine_synth_RsuA/RluB_CS
IPR020103PsdUridine_synth_cat_dom_sf