prot_P-fluviatile_contig12.1371.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig12.1371.1
Unique Nameprot_P-fluviatile_contig12.1371.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length523
Homology
BLAST of mRNA_P-fluviatile_contig12.1371.1 vs. uniprot
Match: A0A6H5KGP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP0_9PHAE)

HSP 1 Score: 368 bits (945), Expect = 7.190e-119
Identity = 274/538 (50.93%), Postives = 332/538 (61.71%), Query Frame = 0
Query:    1 MLSKAAQAVCVASLCLAAMTXXXXXXDAFLVPSLSLKSAAV---ARSHQQRRAGAACARCNFGRVQSCRAATI--TMVGDLDSSNSNNTHTTNKLAALRNRLXXXXXXXXXGGADNEAAAREGQLSFRAMVNRRAKAVMHKSVLAAAAAMIVRASFNPQAASAVG-YKPRSG-GATSSRQLEE---KKLERARQEVVKEQQQMLDAATSDLNGEITEEQAAATSAAMGEVGEQAGGDEATAAAGSRT------LAKPAVDDLAERIRSLPTPEQQERALSQCNADVYKQVWQKLTTSQKTAITKLQIENKSYLAVSIGDYRKAGKQDFAPAAIIFSGFLFVTGMRSSLKIMAKQRKRVRAEAAKFDMERDEFMNVDGEAEFDVDIMKELRDMKEKMAGPGDKYAKDTRAYNPEFAAAAGDEEEYDKKIREALKGTGKGGRTKKGETRKVFTNTNTKGETVKPGSPASKDSADGDDLLGGVGDGAGAADKTKMDQADDDAKAAAQAKRAAAAKRLEDLFNNSSIDDPEDDRGDNRELLP 522
            MLSKAAQ VCVASLCLAA +XXXXXX                  AR HQ    G +CARCN   V+   +  +  TM GD D + SN    +   +ALRNRL         GG +++AA  +G++S R    RR + VM +S +  A A+I+RASFNPQ+ASAVG Y+PR G G  +SRQLE+   KK ER R++V KE ++ L +A      +I++EQAAA  AA+   GE                     +     D+   +I +LPTPE QERAL     + Y +VW KLTT Q+ AITKL++ENK++ AVSIGD RK GK+D +P  + FS FLFVTGMR+SL+ M+ QRKRV+ E+AKFD E+DEFMNVDGEAEFDVDIMKELRDMKEKMAGPGDKYAKDTRAYNP+FAAAAGDEEEYDKKIREAL+GTGK G++ KGETRKVFTN  T G T   G          +DLLG                                   LEDLFNNSSID+PEDD  D RELLP
Sbjct:    1 MLSKAAQ-VCVASLCLAATSXXXXXXXXXXXXXXXXXXXXXXXXARGHQH---GVSCARCNTSPVRPSPSGRVSATMAGD-DPAGSNGRRRSTLSSALRNRLLSRGGDEL-GGREDDAAGADGEVSMR----RRVRGVMRRSFVGLATAVIIRASFNPQSASAVGLYRPRLGRGTATSRQLEKQEAKKQERIREQVQKEHEEKLGSAE-----DISDEQAAA--AAVSTAGEMVDXXXXXXXXXXXXXXXXTEIRSRISDETVAKICALPTPEAQERALQMLLKEDYPKVWTKLTTKQRAAITKLRVENKTFKAVSIGDMRKRGKRDLSPLGLTFSAFLFVTGMRASLRSMSNQRKRVKVESAKFDAEKDEFMNVDGEAEFDVDIMKELRDMKEKMAGPGDKYAKDTRAYNPDFAAAAGDEEEYDKKIREALEGTGKAGKSNKGETRKVFTNEPTTGPTAASGD---------EDLLGXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXLEDLFNNSSIDEPEDDNADGRELLP 505          
BLAST of mRNA_P-fluviatile_contig12.1371.1 vs. uniprot
Match: D8LDI5_ECTSI (MscS Mechanosensitive ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDI5_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 1.170e-92
Identity = 188/353 (53.26%), Postives = 227/353 (64.31%), Query Frame = 0
Query:  173 QLEE---KKLERARQEVVKEQQQMLDAATSDLNGEITEEQAAATSAAMGEVGEQAGGDEATAAAGSRTLAKPAVDDLAERIRSLPTPEQQERALSQCNADVYKQVWQKLTTSQKTAITKLQIENKSYLAVSIGDYRKAGKQDFAPAAIIFSGFLFVTGMRSSLKIMAKQRKRVRAEAAKFDMERDEFMNVDGEAEFDVDIMKELRDMKEKMAGPGDKYAKDTRAYNPEFAAAAGDEEEYDKKIREALKGTGKGGRTKKGETRKVFTNTNTKGETVKPGSPASKDSADGDDLLGGVGDGAGAADKTKMDQADDDAKAAAQAKRAAAAKRLEDLFNNSSIDDPEDDRGDNRELLP 522
            QLEE   KK ER R++V KE ++ L +A  ++ GE     A +T+  + +              G   +     D+   +I +LPTPE QERAL     + Y  VW+KLTT Q+ AITKL++ENK++ AVSIGD RK GK+D +P  + FS FLFVTGMR+SL+ M+ QRKRV+ E+AKFD E+DEFM+VDGEAEFDVDIMKELRDMKEKMAGPGD YAKDTRAYNP+FAAAAGDEEEYDKKI+EAL+GTGK G++ KGETRKVFTN  T G T   G           DLLGG G+                              RLEDLFNNSSID+PEDD  D RE LP
Sbjct:    3 QLEEQEAKKQERIREQVQKEHEEKLGSA-EEIYGEQAAPAAVSTAGEVVDXXXXXXXXXXXXXTGRTEIISRISDETVAKICALPTPEAQERALQMLLKEDYPTVWRKLTTQQRAAITKLRVENKTFKAVSIGDMRKRGKRDLSPLGLTFSAFLFVTGMRASLRSMSNQRKRVKVESAKFDAEKDEFMDVDGEAEFDVDIMKELRDMKEKMAGPGDSYAKDTRAYNPDFAAAAGDEEEYDKKIKEALEGTGKAGKSNKGETRKVFTNEPTTGPTAASGDQ---------DLLGGDGNAXXXXXXXXXXXXX-------XXXXXXXXXRLEDLFNNSSIDEPEDDNADGRERLP 338          
BLAST of mRNA_P-fluviatile_contig12.1371.1 vs. uniprot
Match: A0A835YR84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR84_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 9.860e-11
Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 0
Query:  335 MAKQRKRVRAEAAKFDMERDEFMNVDGEAEFDVDIMKELRDMKEKMAGPGDKYAKDTRAYNPEFAA 400
            M  QRKR+R E  KF    +E M V+GE  ++ D+M+ELR MKE+  GPGDKYAK+TR YNPEFAA
Sbjct:   97 MNAQRKRIREENTKFQQNAEEHM-VEGEVAYNEDLMRELRRMKEENVGPGDKYAKETRRYNPEFAA 161          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1371.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KGP0_9PHAE7.190e-11950.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDI5_ECTSI1.170e-9253.26MscS Mechanosensitive ion channel n=1 Tax=Ectocarp... [more]
A0A835YR84_9STRA9.860e-1159.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 484..504
NoneNo IPR availableCOILSCoilCoilcoord: 172..199
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 333..522
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 312..332
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..311
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.617

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:767077..777459 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1371.1mRNA_P-fluviatile_contig12.1371.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig12 766890..779223 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig12.1371.1 ID=prot_P-fluviatile_contig12.1371.1|Name=mRNA_P-fluviatile_contig12.1371.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=523bp
MLSKAAQAVCVASLCLAAMTTTTTTTDAFLVPSLSLKSAAVARSHQQRRA
GAACARCNFGRVQSCRAATITMVGDLDSSNSNNTHTTNKLAALRNRLRSR
GRGRSRGGADNEAAAREGQLSFRAMVNRRAKAVMHKSVLAAAAAMIVRAS
FNPQAASAVGYKPRSGGATSSRQLEEKKLERARQEVVKEQQQMLDAATSD
LNGEITEEQAAATSAAMGEVGEQAGGDEATAAAGSRTLAKPAVDDLAERI
RSLPTPEQQERALSQCNADVYKQVWQKLTTSQKTAITKLQIENKSYLAVS
IGDYRKAGKQDFAPAAIIFSGFLFVTGMRSSLKIMAKQRKRVRAEAAKFD
MERDEFMNVDGEAEFDVDIMKELRDMKEKMAGPGDKYAKDTRAYNPEFAA
AAGDEEEYDKKIREALKGTGKGGRTKKGETRKVFTNTNTKGETVKPGSPA
SKDSADGDDLLGGVGDGAGAADKTKMDQADDDAKAAAQAKRAAAAKRLED
LFNNSSIDDPEDDRGDNRELLP*
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