mRNA_P-fluviatile_contig12.1371.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1371.1 vs. uniprot
Match: A0A6H5KGP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP0_9PHAE) HSP 1 Score: 369 bits (947), Expect = 2.970e-112 Identity = 274/538 (50.93%), Postives = 331/538 (61.52%), Query Frame = 2
Query: 188 MLSKAAQAVCVASLCLAAMXXXXXXXDAFLVPSLSLKSAAV---ARSHQQRRAGAACARCNFGRVQSCRAATI--TMVGDLDSSNSNNTHTTNKLAALRNRLXXXXXXXXXGGADNEAAAREGQLSFRAMVNRRAKAVMHKSVLAAAAAMIVRASFNPQAASAVG-YKPRSG-GATSSRQLEE---KKLERARQEVVKEQQQMLDAATSDLNGEITEEQAAATSAAMGEVGEQAGGDEATAAAGSRT------LAKPAVDDLAERIRSLPTPEQQERALSQCNADVYKQVWQKLTTSQKTAITKLQIENKSYLAVSIGDYRKAGKQDFAPAAIIFSGFLFVTGMRSSLKIMAKQRKRVRAEAAKFDMERDEFMNVDGEAEFDVDIMKELRDMKEKMAGPGDKYAKDTRAYNPEFAAAAGDEEEYDKKIREALKGTGKGGRTKKGETRKVFTNTNTKGETVKPGSPASKDSADGDDLLGGVGDGAGAADKTKMDQADDDAKAAAQAKRAAAAKRLEDLFNNSSIDDPEDDRGDNRELLP 1753
MLSKAAQ VCVASLCLAA XXXXXX AR HQ G +CARCN V+ + + TM GD D + SN + +ALRNRL GG +++AA +G++S R RR + VM +S + A A+I+RASFNPQ+ASAVG Y+PR G G +SRQLE+ KK ER R++V KE ++ L +A +I++EQAAA AA+ GE + D+ +I +LPTPE QERAL + Y +VW KLTT Q+ AITKL++ENK++ AVSIGD RK GK+D +P + FS FLFVTGMR+SL+ M+ QRKRV+ E+AKFD E+DEFMNVDGEAEFDVDIMKELRDMKEKMAGPGDKYAKDTRAYNP+FAAAAGDEEEYDKKIREAL+GTGK G++ KGETRKVFTN T G T G +DLLG LEDLFNNSSID+PEDD D RELLP
Sbjct: 1 MLSKAAQ-VCVASLCLAATSXXXXXXXXXXXXXXXXXXXXXXXXARGHQH---GVSCARCNTSPVRPSPSGRVSATMAGD-DPAGSNGRRRSTLSSALRNRLLSRGGDEL-GGREDDAAGADGEVSMR----RRVRGVMRRSFVGLATAVIIRASFNPQSASAVGLYRPRLGRGTATSRQLEKQEAKKQERIREQVQKEHEEKLGSAE-----DISDEQAAA--AAVSTAGEMVDXXXXXXXXXXXXXXXXTEIRSRISDETVAKICALPTPEAQERALQMLLKEDYPKVWTKLTTKQRAAITKLRVENKTFKAVSIGDMRKRGKRDLSPLGLTFSAFLFVTGMRASLRSMSNQRKRVKVESAKFDAEKDEFMNVDGEAEFDVDIMKELRDMKEKMAGPGDKYAKDTRAYNPDFAAAAGDEEEYDKKIREALEGTGKAGKSNKGETRKVFTNEPTTGPTAASGD---------EDLLGXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXLEDLFNNSSIDEPEDDNADGRELLP 505
BLAST of mRNA_P-fluviatile_contig12.1371.1 vs. uniprot
Match: D8LDI5_ECTSI (MscS Mechanosensitive ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDI5_ECTSI) HSP 1 Score: 296 bits (757), Expect = 2.090e-87 Identity = 188/353 (53.26%), Postives = 227/353 (64.31%), Query Frame = 2
Query: 704 QLEE---KKLERARQEVVKEQQQMLDAATSDLNGEITEEQAAATSAAMGEVGEQAGGDEATAAAGSRTLAKPAVDDLAERIRSLPTPEQQERALSQCNADVYKQVWQKLTTSQKTAITKLQIENKSYLAVSIGDYRKAGKQDFAPAAIIFSGFLFVTGMRSSLKIMAKQRKRVRAEAAKFDMERDEFMNVDGEAEFDVDIMKELRDMKEKMAGPGDKYAKDTRAYNPEFAAAAGDEEEYDKKIREALKGTGKGGRTKKGETRKVFTNTNTKGETVKPGSPASKDSADGDDLLGGVGDGAGAADKTKMDQADDDAKAAAQAKRAAAAKRLEDLFNNSSIDDPEDDRGDNRELLP 1753
QLEE KK ER R++V KE ++ L +A ++ GE A +T+ + + G + D+ +I +LPTPE QERAL + Y VW+KLTT Q+ AITKL++ENK++ AVSIGD RK GK+D +P + FS FLFVTGMR+SL+ M+ QRKRV+ E+AKFD E+DEFM+VDGEAEFDVDIMKELRDMKEKMAGPGD YAKDTRAYNP+FAAAAGDEEEYDKKI+EAL+GTGK G++ KGETRKVFTN T G T G DLLGG G+ RLEDLFNNSSID+PEDD D RE LP
Sbjct: 3 QLEEQEAKKQERIREQVQKEHEEKLGSA-EEIYGEQAAPAAVSTAGEVVDXXXXXXXXXXXXXTGRTEIISRISDETVAKICALPTPEAQERALQMLLKEDYPTVWRKLTTQQRAAITKLRVENKTFKAVSIGDMRKRGKRDLSPLGLTFSAFLFVTGMRASLRSMSNQRKRVKVESAKFDAEKDEFMDVDGEAEFDVDIMKELRDMKEKMAGPGDSYAKDTRAYNPDFAAAAGDEEEYDKKIKEALEGTGKAGKSNKGETRKVFTNEPTTGPTAASGDQ---------DLLGGDGNAXXXXXXXXXXXXX-------XXXXXXXXXRLEDLFNNSSIDEPEDDNADGRERLP 338
BLAST of mRNA_P-fluviatile_contig12.1371.1 vs. uniprot
Match: A0A835YR84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR84_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 2.720e-10 Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 2
Query: 1190 MAKQRKRVRAEAAKFDMERDEFMNVDGEAEFDVDIMKELRDMKEKMAGPGDKYAKDTRAYNPEFAA 1387
M QRKR+R E KF +E M V+GE ++ D+M+ELR MKE+ GPGDKYAK+TR YNPEFAA
Sbjct: 97 MNAQRKRIREENTKFQQNAEEHM-VEGEVAYNEDLMRELRRMKEENVGPGDKYAKETRRYNPEFAA 161 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1371.1 >prot_P-fluviatile_contig12.1371.1 ID=prot_P-fluviatile_contig12.1371.1|Name=mRNA_P-fluviatile_contig12.1371.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=523bp MLSKAAQAVCVASLCLAAMTTTTTTTDAFLVPSLSLKSAAVARSHQQRRAback to top mRNA from alignment at P-fluviatile_contig12:766890..779223+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1371.1 ID=mRNA_P-fluviatile_contig12.1371.1|Name=mRNA_P-fluviatile_contig12.1371.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=12334bp|location=Sequence derived from alignment at P-fluviatile_contig12:766890..779223+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:766890..779223+ >mRNA_P-fluviatile_contig12.1371.1 ID=mRNA_P-fluviatile_contig12.1371.1|Name=mRNA_P-fluviatile_contig12.1371.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3138bp|location=Sequence derived from alignment at P-fluviatile_contig12:766890..779223+ (Porterinema fluviatile SAG_2381)back to top |