prot_P-fluviatile_contig11.1308.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig11.1308.1
Unique Nameprot_P-fluviatile_contig11.1308.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1026
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig11.1308.1 vs. uniprot
Match: UPI0006899797 (family 20 glycosylhydrolase n=1 Tax=Thermorudis peleae TaxID=1382356 RepID=UPI0006899797)

HSP 1 Score: 59.3 bits (142), Expect = 3.740e-5
Identity = 63/208 (30.29%), Postives = 93/208 (44.71%), Query Frame = 0 
Query:    2 LWPPPKSCTV-LGDEVCRIPARVVLVLPAEGAAAPGTLIFQT--LQAALSHC-GISMICTRGRCPPGSGGEFFITLACGGLQGACSTSSSARGGQGFSVVVGSGMVRVAGTGEPGLFYGVRTLCQLLQFYAMPLPSNESALDIPCCILKDEPDVVRRSLVVDARYPLLPTLPSLMRTIEAASRSRINVIQLTVTRETASWLVRHDQDG 205
            L P P+  T    DE   + A   +VL    AAA     F    LQAA+    G+++   R      +G    I LA  G   A  T ++    +G+S+ + +  V V G  E GLFYGV+TLCQL+Q     LP+           ++D P +  R +++D     +PT  +L R I+  +  + N  QL +    A   V   QDG
Sbjct:    7 LLPMPREVTRGPADEAFTLTAHTAIVL---SAAASEETFFAARWLQAAVREATGLTLTIRRALSLDEAGA---IVLAVAGRDEAAGTLATLPA-EGYSLRITADRVTVTGVDEAGLFYGVQTLCQLIQTKGGRLPA---------LTIRDWPRLANRGVMLDVSRGKVPTRETLYRLIDYLASLKYNHFQLYIEHTFAFPSVPELQDG 198
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI00068997973.740e-530.29family 20 glycosylhydrolase n=1 Tax=Thermorudis pe... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029018Beta-hexosaminidase-like, domain 2GENE3D3.30.379.10coord: 1..149
e-value: 7.2E-11
score: 44.3
IPR029018Beta-hexosaminidase-like, domain 2SUPERFAMILY55545beta-N-acetylhexosaminidase-like domaincoord: 2..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:3590893..3598384 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1308.1mRNA_P-fluviatile_contig11.1308.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig11 3590339..3601774 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig11.1308.1 ID=prot_P-fluviatile_contig11.1308.1|Name=mRNA_P-fluviatile_contig11.1308.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1026bp
MLWPPPKSCTVLGDEVCRIPARVVLVLPAEGAAAPGTLIFQTLQAALSHC
GISMICTRGRCPPGSGGEFFITLACGGLQGACSTSSSARGGQGFSVVVGS
GMVRVAGTGEPGLFYGVRTLCQLLQFYAMPLPSNESALDIPCCILKDEPD
VVRRSLVVDARYPLLPTLPSLMRTIEAASRSRINVIQLTVTRETASWLVR
HDQDGGRTKAIPATRGGGAFQKLGQRGLPDTDLGENGAWGWGALGKIGAF
CMEHFVELVLGWAVVPGDEPREAQRAAVQLLSSLSRQFQSDEMHIVFEEG
VHLAAFDVTPEAILDRPEERRRPEENPVIGVNTGTEKSRERLSSSEPGDA
PHAVPTSTDGGEGFSLTRFLSNVVVACSQVTGQLQSSFWLRSRHQPRILL
KISAQFQAAAVTLCTGNLSLPRRISVFLGEGLLESSAERVVGEYECRDTS
SGSVGKCCSVTDFTCALVFALVYLPHKSPRSLRASRFSSVLKMFGYIAIS
KQRTIVLDGIPPAVLASLQGVGYLPVELAFSMGTDTLNELSFGALSEDVV
INGRSDDLAVFLGPAHLGYICAGHQGPGSGRREEACFSIHGALADVAKAV
AKARRTGCGMQLRVSTATAAGMKNTSPRNSRPAAFSDATCEGGNLYYPTL
LSNALEFLAAGLCWRLDKASTALHLSTPGGGAGEGRAVVVRGDSGLSTGG
ERAGERKPSEMGPKPLRGPSDPATLLLSHMLRANDAGTQEAVSSSQLISC
LRMLLESWDPFPCDEGSCGARDRENVVMRNLDSVLWAVHAPGGNGSLHFS
ADDDSRFVLSALQSRYLRLEEALKIMPGTLEAATAILAPFMELRRAVRVL
KVSGRLLLAAYNHVCRLDQRVSKERSNNLYLVRSPSTAPTSTGPGLGDGQ
QDRYDRPASNQLPTYGNSARPAGADIVPQSAGKGPQNRGSREGVRRNRRN
LQKTMAQLPSSTRLDFANRYLEEFRALSASWDSTTYLSMGKMVLHSSLSG
LLRNLAHDESAAQMKGLCESTIFNR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029018Hex-like_dom2