mRNA_P-fluviatile_contig11.1308.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig11.1308.1
Unique NamemRNA_P-fluviatile_contig11.1308.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig11.1308.1 vs. uniprot
Match: UPI0004CD81E0 (uncharacterized protein LOC103577419 n=1 Tax=Microplitis demolitor TaxID=69319 RepID=UPI0004CD81E0)

HSP 1 Score: 72.0 bits (175), Expect = 9.450e-9
Identity = 47/130 (36.15%), Postives = 65/130 (50.00%), Query Frame = 2 
Query:  332 LHISSANGHVDATRALLRLGASPEVKGLGALSGKTPWDVATTAV-RQVFANELFSQVAYGDDDKVLALLQAGVQADVTDGGPRSDTPLHWAAGAGHASICSALLDNGSDVEGCNSEERAHFTKPAEAATR 718
            L  +S    VD  R LL  GA P VK      G+   DVA + V R ++  EL    A  + D+V+ LL+AG+  +  D     +TPLHWAA  G+  + + L+D G+DV   N+E     T   EA  R
Sbjct:   53 LSYASKTNQVDVVRTLLSCGADPAVKNA---HGRNAVDVAASEVIRLIYVEELLRATAASEIDRVIQLLEAGIDVNSWDSEGSKNTPLHWAACYGNKDVVACLIDRGADV---NAENGCGATPLHEAVNR 176
[Close]
BLAST of mRNA_P-fluviatile_contig11.1308.1 vs. uniprot
Match: A0A158NVA4_ATTCE (Uncharacterized protein n=33 Tax=Formicidae TaxID=36668 RepID=A0A158NVA4_ATTCE)

HSP 1 Score: 71.6 bits (174), Expect = 1.240e-8
Identity = 49/146 (33.56%), Postives = 74/146 (50.68%), Query Frame = 2 
Query:  284 RQRLISVIRESDGASALHISSANGHVDATRALLRLGASPEVKGLGALSGKTPWDVATT-AVRQVFANELFSQVAYGDDDKVLALLQAGVQADVTDGGPRSDTPLHWAAGAGHASICSALLDNGSDVEGCNSEERAHFTKPAEAATR 718
            R ++++     +G   L+ S  N  VD  R LL  GA P V+      G    DVA++ A+R+++  E+    A  + D+V+ LL AG+  +  D     +TPLHWAA  G+  I + LLD G+DV   N+E     T   +A  R
Sbjct:   38 RDKILNQPVLEEGTFLLYASKTN-QVDIVRTLLNCGADPAVQNA---DGHNAVDVASSDAIRRIYIEEMLRATAASEVDRVMQLLDAGLDVNSWDSQGSKNTPLHWAACYGNKHIIACLLDKGADV---NAENGCGATPLHDAVNR 176
[Close]
BLAST of mRNA_P-fluviatile_contig11.1308.1 vs. uniprot
Match: UPI001442F0B7 (uncharacterized protein LOC117219738 n=1 Tax=Megalopta genalis TaxID=115081 RepID=UPI001442F0B7)

HSP 1 Score: 70.1 bits (170), Expect = 3.650e-8
Identity = 41/114 (35.96%), Postives = 62/114 (54.39%), Query Frame = 2 
Query:  332 LHISSANGHVDATRALLRLGASPEVKGLGALSGKTPWDVATT-AVRQVFANELFSQVAYGDDDKVLALLQAGVQADVTDGGPRSDTPLHWAAGAGHASICSALLDNGSDVEGCN 670
            L  ++ N   D  R LL  GA+P ++ +   +G    DVA++ A+R+ +  EL    A  + D+VL LL AG+  +  D     +TPLHWAA  G+  I + L+D G+DV   N
Sbjct:   53 LSYAAKNNQPDIVRTLLSCGANPAIQNV---NGHNAVDVASSDAIRRTYIEELLRATAASEVDRVLQLLDAGLNVNSWDSHGSKNTPLHWAACYGNKDIVACLIDRGADVNAVN 163
[Close]
BLAST of mRNA_P-fluviatile_contig11.1308.1 vs. uniprot
Match: E2B8G6_HARSA (Tankyrase-1 n=4 Tax=Formicidae TaxID=36668 RepID=E2B8G6_HARSA)

HSP 1 Score: 70.1 bits (170), Expect = 3.660e-8
Identity = 47/130 (36.15%), Postives = 64/130 (49.23%), Query Frame = 2 
Query:  332 LHISSANGHVDATRALLRLGASPEVKGLGALSGKTPWDVATT-AVRQVFANELFSQVAYGDDDKVLALLQAGVQADVTDGGPRSDTPLHWAAGAGHASICSALLDNGSDVEGCNSEERAHFTKPAEAATR 718
            L  +S     D  R LL  GA P V+     +G    DVA T A+R+++  EL    A  + D+V+ LL AG+  +  D     +TPLHWAA  G+  I   LLD G+DV   N+E     T   +A  R
Sbjct:   53 LSYASKTNQADIVRTLLNCGADPAVQNA---NGHNAVDVAATDAIRRIYIEELLRATAASEIDRVVQLLDAGLDVNSWDSQGSKNTPLHWAACYGNKDIVQCLLDKGADV---NAENGCGATPLHDAVNR 176
[Close]
BLAST of mRNA_P-fluviatile_contig11.1308.1 vs. uniprot
Match: A0A6J1PL96_9HYME (tankyrase-like n=1 Tax=Temnothorax curvispinosus TaxID=300111 RepID=A0A6J1PL96_9HYME)

HSP 1 Score: 67.0 bits (162), Expect = 1.280e-7
Identity = 44/130 (33.85%), Postives = 67/130 (51.54%), Query Frame = 2 
Query:  332 LHISSANGHVDATRALLRLGASPEVKGLGALSGKTPWDVATT-AVRQVFANELFSQVAYGDDDKVLALLQAGVQADVTDGGPRSDTPLHWAAGAGHASICSALLDNGSDVEGCNSEERAHFTKPAEAATR 718
            L  +S     D  R LL  GA P V+     +G    DVA++ A+R+++ +E+    A  + D+V+ LL AG+  +  D     +TPLHWAA  G+  I + LLD G++V   N+E     T   +A  R
Sbjct:   53 LSYASKTNQADIVRTLLNCGADPAVQNA---NGHNAVDVASSDAIRRIYIDEMLRATAASEVDRVVQLLDAGLDVNSWDSQGSKNTPLHWAACYGNKDIIACLLDKGANV---NAENGCGATPLHDAVNR 176
[Close]
BLAST of mRNA_P-fluviatile_contig11.1308.1 vs. uniprot
Match: A0A3L8DNB4_OOCBI (Glyco_hydro_20b domain-containing protein n=1 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A3L8DNB4_OOCBI)

HSP 1 Score: 68.2 bits (165), Expect = 1.410e-7
Identity = 45/130 (34.62%), Postives = 66/130 (50.77%), Query Frame = 2 
Query:  332 LHISSANGHVDATRALLRLGASPEVKGLGALSGKTPWDVATT-AVRQVFANELFSQVAYGDDDKVLALLQAGVQADVTDGGPRSDTPLHWAAGAGHASICSALLDNGSDVEGCNSEERAHFTKPAEAATR 718
            L  +S     D  R LL  GA P V+     +G    DVA++ A+R+++  EL    A  + D+V+ LL AG+  +  D     +TPLHWAA  G+  I + L+D G+DV   N+E     T   +A  R
Sbjct:   36 LSYASKTNQADIVRTLLSCGADPAVQNA---NGHNAVDVASSDAIRRIYIEELLRATAASEVDRVVQLLDAGLDVNSWDSQGSKNTPLHWAACYGNKDIITCLIDKGADV---NAENGCGATPLHDAVNR 159
[Close]
BLAST of mRNA_P-fluviatile_contig11.1308.1 vs. uniprot
Match: A0A6P3XP57_DINQU (uncharacterized protein LOC106747165 n=3 Tax=Formicidae TaxID=36668 RepID=A0A6P3XP57_DINQU)

HSP 1 Score: 67.4 bits (163), Expect = 2.450e-7
Identity = 45/130 (34.62%), Postives = 64/130 (49.23%), Query Frame = 2 
Query:  332 LHISSANGHVDATRALLRLGASPEVKGLGALSGKTPWDVATT-AVRQVFANELFSQVAYGDDDKVLALLQAGVQADVTDGGPRSDTPLHWAAGAGHASICSALLDNGSDVEGCNSEERAHFTKPAEAATR 718
            L  +S     D  R LL  GA P V+      G    DVA + A+R+++  EL    A  + D+V+ LL +G+  +  D     +TPLHWAA  G+  I + LLD G+DV   N+E     T   +A  R
Sbjct:   53 LSYASKTNQADIVRTLLNCGADPAVQNA---KGHNAVDVAASDAIRRIYIEELLRATAASEVDRVVQLLDSGLDVNSWDSQGSKNTPLHWAACYGNKDIVACLLDKGADV---NAENGCGATPLHDAVNR 176
[Close]
BLAST of mRNA_P-fluviatile_contig11.1308.1 vs. uniprot
Match: UPI0009959818 (uncharacterized protein LOC109855953 isoform X2 n=1 Tax=Pseudomyrmex gracilis TaxID=219809 RepID=UPI0009959818)

HSP 1 Score: 67.0 bits (162), Expect = 2.880e-7
Identity = 41/114 (35.96%), Postives = 60/114 (52.63%), Query Frame = 2 
Query:  332 LHISSANGHVDATRALLRLGASPEVKGLGALSGKTPWDVATT-AVRQVFANELFSQVAYGDDDKVLALLQAGVQADVTDGGPRSDTPLHWAAGAGHASICSALLDNGSDVEGCN 670
            L  +S     D  R LL  GA P V+     +G    DVA++ A+R+++  EL    A  + D+V+ LL AG+  +  D     +TPLHWAA  G+  I + LLD G++V   N
Sbjct:   53 LSYASKTNQADIVRTLLSCGADPAVQNA---NGHNAVDVASSDAIRRIYIEELLRATAASEVDRVVQLLDAGLDVNSWDSPDSKNTPLHWAACYGNKEIITCLLDKGANVNAEN 163
[Close]
BLAST of mRNA_P-fluviatile_contig11.1308.1 vs. uniprot
Match: A0A7M7R8G9_APIME (uncharacterized protein LOC412326 isoform X1 n=25 Tax=Apoidea TaxID=34735 RepID=A0A7M7R8G9_APIME)

HSP 1 Score: 67.0 bits (162), Expect = 3.200e-7
Identity = 42/130 (32.31%), Postives = 68/130 (52.31%), Query Frame = 2 
Query:  284 RQRLISVIRESDGASALHISSANGHVDATRALLRLGASPEVKGLGALSGKTPWDVATT-AVRQVFANELFSQVAYGDDDKVLALLQAGVQADVTDGGPRSDTPLHWAAGAGHASICSALLDNGSDVEGCN 670
            ++++++     +G    + S AN   D  R LL  GA+P ++     +G    DVA++  +R+ +  EL    A  + D+VL LL AG+  +  D     +TPLHWAA  G+  I + L+D G+DV   N
Sbjct:   38 KEKILNQPLLEEGTFLSYASKAN-QPDIVRTLLSCGANPAIQNT---NGHNAVDVASSDIIRRTYIEELLRATAASELDRVLQLLDAGLNVNSWDSHGSKNTPLHWAACYGNKDIVTCLIDRGADVNAVN 163
[Close]
BLAST of mRNA_P-fluviatile_contig11.1308.1 vs. uniprot
Match: A0A0M8ZS23_9HYME (Tankyrase-1 n=1 Tax=Melipona quadrifasciata TaxID=166423 RepID=A0A0M8ZS23_9HYME)

HSP 1 Score: 63.2 bits (152), Expect = 4.860e-6
Identity = 40/130 (30.77%), Postives = 66/130 (50.77%), Query Frame = 2 
Query:  284 RQRLISVIRESDGASALHISSANGHVDATRALLRLGASPEVKGLGALSGKTPWDVATT-AVRQVFANELFSQVAYGDDDKVLALLQAGVQADVTDGGPRSDTPLHWAAGAGHASICSALLDNGSDVEGCN 670
            + ++++     +G    + S  N   D  R LL  GA+P ++     +G    DVA++  +R+ +  EL    A  + ++VL LL AG+  +  D     +TPLHWAA  G+  I + L+D G+DV   N
Sbjct:   38 KDKILNQPLLEEGTFLSYASKVN-QPDIVRTLLSCGANPAIQNS---NGYNAVDVASSDIIRRTYIEELLRATAASELERVLQLLDAGINVNSWDSHGSKNTPLHWAACYGNKDIVTCLIDRGADVNAVN 163
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1308.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
UPI0004CD81E09.450e-936.15uncharacterized protein LOC103577419 n=1 Tax=Micro... [more]
A0A158NVA4_ATTCE1.240e-833.56Uncharacterized protein n=33 Tax=Formicidae TaxID=... [more]
UPI001442F0B73.650e-835.96uncharacterized protein LOC117219738 n=1 Tax=Megal... [more]
E2B8G6_HARSA3.660e-836.15Tankyrase-1 n=4 Tax=Formicidae TaxID=36668 RepID=E... [more]
A0A6J1PL96_9HYME1.280e-733.85tankyrase-like n=1 Tax=Temnothorax curvispinosus T... [more]
A0A3L8DNB4_OOCBI1.410e-734.62Glyco_hydro_20b domain-containing protein n=1 Tax=... [more]
A0A6P3XP57_DINQU2.450e-734.62uncharacterized protein LOC106747165 n=3 Tax=Formi... [more]
UPI00099598182.880e-735.96uncharacterized protein LOC109855953 isoform X2 n=... [more]
A0A7M7R8G9_APIME3.200e-732.31uncharacterized protein LOC412326 isoform X1 n=25 ... [more]
A0A0M8ZS23_9HYME4.860e-630.77Tankyrase-1 n=1 Tax=Melipona quadrifasciata TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:3590339..3601774 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score67.8
Seed ortholog evalue3.4e-08
Seed eggNOG ortholog357808.RoseRS_3616
EggNOG free text desc.Glycoside hydrolase, family 20
EggNOG OGs2G609@200795,376QW@32061,COG3525@1,COG3525@2
COG Functional cat.G
Best tax levelChloroflexia
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons19
Model size4796
Cds size3078
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815427.517579-UTR-P-fluviatile_contig11:3590338..35908921622815427.517579-UTR-P-fluviatile_contig11:3590338..3590892Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3590339..3590892 -
1693561813.70843-UTR-P-fluviatile_contig11:3590338..35908921693561813.70843-UTR-P-fluviatile_contig11:3590338..3590892Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3590339..3590892 -
1622815427.7367315-UTR-P-fluviatile_contig11:3598384..35987441622815427.7367315-UTR-P-fluviatile_contig11:3598384..3598744Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3598385..3598744 -
1693561814.1490211-UTR-P-fluviatile_contig11:3598384..35987441693561814.1490211-UTR-P-fluviatile_contig11:3598384..3598744Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3598385..3598744 -
1622815427.748187-UTR-P-fluviatile_contig11:3599029..35991571622815427.748187-UTR-P-fluviatile_contig11:3599029..3599157Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3599030..3599157 -
1693561814.1574814-UTR-P-fluviatile_contig11:3599029..35991571693561814.1574814-UTR-P-fluviatile_contig11:3599029..3599157Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3599030..3599157 -
1622815427.7579246-UTR-P-fluviatile_contig11:3599319..35994571622815427.7579246-UTR-P-fluviatile_contig11:3599319..3599457Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3599320..3599457 -
1693561814.1688051-UTR-P-fluviatile_contig11:3599319..35994571693561814.1688051-UTR-P-fluviatile_contig11:3599319..3599457Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3599320..3599457 -
1622815427.7678483-UTR-P-fluviatile_contig11:3599829..35999641622815427.7678483-UTR-P-fluviatile_contig11:3599829..3599964Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3599830..3599964 -
1693561814.1824934-UTR-P-fluviatile_contig11:3599829..35999641693561814.1824934-UTR-P-fluviatile_contig11:3599829..3599964Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3599830..3599964 -
1622815427.7766156-UTR-P-fluviatile_contig11:3600381..36004691622815427.7766156-UTR-P-fluviatile_contig11:3600381..3600469Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3600382..3600469 -
1693561814.1938665-UTR-P-fluviatile_contig11:3600381..36004691693561814.1938665-UTR-P-fluviatile_contig11:3600381..3600469Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3600382..3600469 -
1622815427.7855916-UTR-P-fluviatile_contig11:3601069..36011421622815427.7855916-UTR-P-fluviatile_contig11:3601069..3601142Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3601070..3601142 -
1693561814.2034478-UTR-P-fluviatile_contig11:3601069..36011421693561814.2034478-UTR-P-fluviatile_contig11:3601069..3601142Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3601070..3601142 -
1622815427.8003285-UTR-P-fluviatile_contig11:3601532..36017741622815427.8003285-UTR-P-fluviatile_contig11:3601532..3601774Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3601533..3601774 -
1693561814.2131515-UTR-P-fluviatile_contig11:3601532..36017741693561814.2131515-UTR-P-fluviatile_contig11:3601532..3601774Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3601533..3601774 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815427.528053-CDS-P-fluviatile_contig11:3590892..35909311622815427.528053-CDS-P-fluviatile_contig11:3590892..3590931Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3590893..3590931 -
1693561814.0079117-CDS-P-fluviatile_contig11:3590892..35909311693561814.0079117-CDS-P-fluviatile_contig11:3590892..3590931Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3590893..3590931 -
1622815427.5379767-CDS-P-fluviatile_contig11:3591173..35912961622815427.5379767-CDS-P-fluviatile_contig11:3591173..3591296Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3591174..3591296 -
1693561814.0177524-CDS-P-fluviatile_contig11:3591173..35912961693561814.0177524-CDS-P-fluviatile_contig11:3591173..3591296Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3591174..3591296 -
1622815427.549745-CDS-P-fluviatile_contig11:3591508..35918811622815427.549745-CDS-P-fluviatile_contig11:3591508..3591881Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3591509..3591881 -
1693561814.0338326-CDS-P-fluviatile_contig11:3591508..35918811693561814.0338326-CDS-P-fluviatile_contig11:3591508..3591881Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3591509..3591881 -
1622815427.5617-CDS-P-fluviatile_contig11:3592186..35923121622815427.5617-CDS-P-fluviatile_contig11:3592186..3592312Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3592187..3592312 -
1693561814.047508-CDS-P-fluviatile_contig11:3592186..35923121693561814.047508-CDS-P-fluviatile_contig11:3592186..3592312Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3592187..3592312 -
1622815427.5744574-CDS-P-fluviatile_contig11:3592803..35928801622815427.5744574-CDS-P-fluviatile_contig11:3592803..3592880Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3592804..3592880 -
1693561814.0625863-CDS-P-fluviatile_contig11:3592803..35928801693561814.0625863-CDS-P-fluviatile_contig11:3592803..3592880Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3592804..3592880 -
1622815427.587233-CDS-P-fluviatile_contig11:3593516..35936181622815427.587233-CDS-P-fluviatile_contig11:3593516..3593618Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3593517..3593618 -
1693561814.0728176-CDS-P-fluviatile_contig11:3593516..35936181693561814.0728176-CDS-P-fluviatile_contig11:3593516..3593618Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3593517..3593618 -
1622815427.6006646-CDS-P-fluviatile_contig11:3594096..35945271622815427.6006646-CDS-P-fluviatile_contig11:3594096..3594527Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3594097..3594527 -
1693561814.0825913-CDS-P-fluviatile_contig11:3594096..35945271693561814.0825913-CDS-P-fluviatile_contig11:3594096..3594527Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3594097..3594527 -
1622815427.6727636-CDS-P-fluviatile_contig11:3594759..35949441622815427.6727636-CDS-P-fluviatile_contig11:3594759..3594944Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3594760..3594944 -
1693561814.0921004-CDS-P-fluviatile_contig11:3594759..35949441693561814.0921004-CDS-P-fluviatile_contig11:3594759..3594944Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3594760..3594944 -
1622815427.6827252-CDS-P-fluviatile_contig11:3595296..35961061622815427.6827252-CDS-P-fluviatile_contig11:3595296..3596106Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3595297..3596106 -
1693561814.1019595-CDS-P-fluviatile_contig11:3595296..35961061693561814.1019595-CDS-P-fluviatile_contig11:3595296..3596106Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3595297..3596106 -
1622815427.6927547-CDS-P-fluviatile_contig11:3596476..35966421622815427.6927547-CDS-P-fluviatile_contig11:3596476..3596642Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3596477..3596642 -
1693561814.1142006-CDS-P-fluviatile_contig11:3596476..35966421693561814.1142006-CDS-P-fluviatile_contig11:3596476..3596642Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3596477..3596642 -
1622815427.7023036-CDS-P-fluviatile_contig11:3596954..35971181622815427.7023036-CDS-P-fluviatile_contig11:3596954..3597118Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3596955..3597118 -
1693561814.1254203-CDS-P-fluviatile_contig11:3596954..35971181693561814.1254203-CDS-P-fluviatile_contig11:3596954..3597118Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3596955..3597118 -
1622815427.7128341-CDS-P-fluviatile_contig11:3597616..35980261622815427.7128341-CDS-P-fluviatile_contig11:3597616..3598026Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3597617..3598026 -
1693561814.1329792-CDS-P-fluviatile_contig11:3597616..35980261693561814.1329792-CDS-P-fluviatile_contig11:3597616..3598026Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3597617..3598026 -
1622815427.7246354-CDS-P-fluviatile_contig11:3598312..35983841622815427.7246354-CDS-P-fluviatile_contig11:3598312..3598384Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3598313..3598384 -
1693561814.1408334-CDS-P-fluviatile_contig11:3598312..35983841693561814.1408334-CDS-P-fluviatile_contig11:3598312..3598384Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3598313..3598384 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1308.1prot_P-fluviatile_contig11.1308.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig11 3590893..3598384 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig11.1308.1

>prot_P-fluviatile_contig11.1308.1 ID=prot_P-fluviatile_contig11.1308.1|Name=mRNA_P-fluviatile_contig11.1308.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1026bp
MLWPPPKSCTVLGDEVCRIPARVVLVLPAEGAAAPGTLIFQTLQAALSHC
GISMICTRGRCPPGSGGEFFITLACGGLQGACSTSSSARGGQGFSVVVGS
GMVRVAGTGEPGLFYGVRTLCQLLQFYAMPLPSNESALDIPCCILKDEPD
VVRRSLVVDARYPLLPTLPSLMRTIEAASRSRINVIQLTVTRETASWLVR
HDQDGGRTKAIPATRGGGAFQKLGQRGLPDTDLGENGAWGWGALGKIGAF
CMEHFVELVLGWAVVPGDEPREAQRAAVQLLSSLSRQFQSDEMHIVFEEG
VHLAAFDVTPEAILDRPEERRRPEENPVIGVNTGTEKSRERLSSSEPGDA
PHAVPTSTDGGEGFSLTRFLSNVVVACSQVTGQLQSSFWLRSRHQPRILL
KISAQFQAAAVTLCTGNLSLPRRISVFLGEGLLESSAERVVGEYECRDTS
SGSVGKCCSVTDFTCALVFALVYLPHKSPRSLRASRFSSVLKMFGYIAIS
KQRTIVLDGIPPAVLASLQGVGYLPVELAFSMGTDTLNELSFGALSEDVV
INGRSDDLAVFLGPAHLGYICAGHQGPGSGRREEACFSIHGALADVAKAV
AKARRTGCGMQLRVSTATAAGMKNTSPRNSRPAAFSDATCEGGNLYYPTL
LSNALEFLAAGLCWRLDKASTALHLSTPGGGAGEGRAVVVRGDSGLSTGG
ERAGERKPSEMGPKPLRGPSDPATLLLSHMLRANDAGTQEAVSSSQLISC
LRMLLESWDPFPCDEGSCGARDRENVVMRNLDSVLWAVHAPGGNGSLHFS
ADDDSRFVLSALQSRYLRLEEALKIMPGTLEAATAILAPFMELRRAVRVL
KVSGRLLLAAYNHVCRLDQRVSKERSNNLYLVRSPSTAPTSTGPGLGDGQ
QDRYDRPASNQLPTYGNSARPAGADIVPQSAGKGPQNRGSREGVRRNRRN
LQKTMAQLPSSTRLDFANRYLEEFRALSASWDSTTYLSMGKMVLHSSLSG
LLRNLAHDESAAQMKGLCESTIFNR*
back to top

mRNA from alignment at P-fluviatile_contig11:3590339..3601774-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig11.1308.1 ID=mRNA_P-fluviatile_contig11.1308.1|Name=mRNA_P-fluviatile_contig11.1308.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11436bp|location=Sequence derived from alignment at P-fluviatile_contig11:3590339..3601774- (Porterinema fluviatile SAG_2381)
AGAGGAGGTCCACGTACTTTTAACTGCTGCGGAACTCGGGCGATCTGACA
TTATTGGGAAGGCGATCGAATCGTTAACTGCAGGTTTGAAGAAATGTGTG
CTCTCGAGTATCTCCCAGCAGCAAACAACGCGCGCGGCCGCAGCGGCAGC
CTTGTTTCTGCCGGCTACAGATCTCCATGGCTGTTGAGCGTGCTTCGTAT
GGAAAACATGCCAGGCGTTTGTGAAACAAGATGAAACGGGCGGTAAGAAC
GTTGTGCGCGAGAGGGACTTGAGAGATCTGACGCATTGTAATCATCGGCA
CACATGTCGCAGCTATGAACAAACTATATAACTCGCGCAGTGTTCTTGTG
TAAACCAAGCTCCGTGAAAGGAGCTCCGCCTCGGAGACGGAAGCTCATCG
GCGAACCTTGATGTCTAAAAAATTTGAAGGTTGACAAACAAAATCAAACA
TCACAAGCATGCAGTGCGAGGCGAGACAGAGAGCCCAATTAAACCAAGAG
GTTCTCTCCATCTCCCCGATTCGTCCCACGAATGAACATCACACATGAGC
TGCGGGCTCTGAACGTACAACTTGCGCAATCGTTGAACCCACTCTGTCCT
CGTTCCCCTGTGACCCAACCGCTGTTGCGCAGGATCTCCCGCTGACGTCT
CGCCAAGGGAAGCCCACAAGGAACGGCAACGCCTAATATCCGTGATTAGG
GAGAGGTGCGGTGGTATCAGATAGATTGCGGGAATCCAAAAGATTTGATA
ACACACGAATGTCGTACACGGAGATGGTTGTTCCATCTGCGCCCTTGCGT
CAAGGAGACGAAGATTCAAATGTGTTGTGTACCCCTGCTAATCTCGCATA
ACATTCCACTCCCATCTAAGCTTGGGCTGTTTGGAGGGTCGGTTGTGACT
CTCCGACCACGCGACACGGTTCTTGCTCACGTGCTGCACTTTGCTGCACG
ATCACAGTTTCACAAACCTTTGTCCGGCGACAAACCTTGTTTGGACAGAT
CTGCTCCTTTTTCTTCCGACTGCTCTCTGGTAGCGATTTCGATGTGGCGT
ACGCGTCGTTGTCTCTAGCCAGCGCGGAGTAGTTTTGGAGCCGCATCTCT
TGGGCACAAGCAAATTCCAACGACCGCCTCCGAGCAGGGCATAGCATGGT
TTCGCAGCAAGCGTGCAACAAGCAAGTGCTCGGTTGCCAAATGAACCGAT
CGGTGTCAAAATTCACTGAAATGCGATGGTTCATGCTGTGCCTTTTGCCG
TGCATCTAACCGGAAACATTTCATCCTTCTCTCTATTGGGTGCTTGCGAT
ACCAGTGATGGAGCGTCTGCGCTGCACATCTCGAGTGCGAACGGTCACGT
TGACGCCACTCGCGCCCTCCTGAGGCTCGGTGCTTCCCCGGAGGTAAGCC
CGATGTGCGAAAATGACACGTGTTTCTGAGAAAGTCAACGTACAAGAATG
CAGGAATAAATGCGTCCACTCCGTCGCTAGGAGGTCGACGATCACTTGTT
GTCCAGACGTGATCCTTGGGACTTTAGCAATTGCTTGCCTGACTTCACGT
GTTGACGTAGTCAGCGTGGGCATACACTCGGCAAGAGAAAAGGCGCAAGT
TAACAATCTCACGCCTTCTTGCCCCGCGCGATCCCGGCCCATCATCAATG
TATGAGGAGCGAGCACGGAAGTGCTGGGCAGATGGGTCAAGTTTTGGATG
CGTGCCAACATGCAGTTCTGATAGTTTCGCGTGATTGGAATCGCTGCCCG
AATCACATTCGGTGAAGAGCTGTCCCGACGCTTTTGTATCGTCGCTCTCT
CTTTAATAAGGTGAAGGGCTTGGGGGCTCTTAGCGGGAAAACGCCCTGGG
ATGTGGCGACTACCGCAGTGAGGCAGGTCTTCGCCAACGAGTTATTTTCG
CAGGTGGCGTACGGGGATGATGACAAGGTCCTCGCGCTTCTCCAGGTAAG
CGAAAACGGTCGCGCTCTTTCGGGATTCCAATACAGGAGGCCATCCAGTG
CTTCTTGAGACCGAAGGGTGCCTACGTGCGCGTCAAGCATGACGAGAGTG
CTGTCGTGCCTTGCACCCTCGCCGTATTTTCGCGAGGCCCCTCCGGCATG
CTCGCGGCACAGATGTTGCTTGACTCGTGTAGTCAAGTTTCAGAAGGGGG
TAGGCGGGCAGAACGGCTCGGGGGTAAGTCAGTCGAGCTCCGCCATCTTC
ATCGATCGTCCGCCACTCACTCTCCGGCTTTGACGAGTTGCTACGCTTCC
CGCGACCGCCCGGCTAATTTCTGCATCCTGAAACTCGGCGCTACGCGACG
CGACACGACGCGACTAGGCCGGCGTACAGGCAGACGTCACGGACGGGGGT
CCTCGCTCGGACACCCCCCTTCACTGGGCGGCAGGTGCCGGGCACGCCAG
CATTTGCTCGGCCTTGCTCGACAACGGGAGCGACGTGGAGGGGTGCAACA
GCGAAGTTGAGATTCAGGGCCGCCTAGAGGCATGTTTAACGGTACTTCAG
ACAACAGGAAGCAGGCTGATTGTTGGCCTGCACGTAGCGCAGCGCAGAAC
GCGCGCCCCCCTCCCCTTGGCAGAAGCTTGACGCTCCTTTCAACGTTGTC
TTTCTCTTCGATTGCAGGAGCGAGCGCACTTCACGAAGCCAGCAGAGGCG
GCCACGCGTCCGTGGTGTCCCTCTTGCTGGAACGGGGCGCGAACCCGCAT
GTGGTGGGCACGGGTGGAGAGTTCAAGGACAAGACTCCTCTCCAGGCGAG
TCGTGACCTGCACGAGCTGCACCACTTTGATAACGGGGCCCCGATGGGGT
CTTGACGCACAAATAGTGGAGGGGACGGGAGGGTGTGGCATATGTCGGGA
TAATACCGATGTTCAGTTAATTCGTGCGCGAATGCACCTCGCGCTTGAAG
AGCGAGGGGCTCGTCGACAGTGTTAGTACGCGTGGATATCATTTATACCA
GCCCTTCCGTGCTTGAGCTCGCGTGTCCTCCGCCTGCCTGCCCCTCCTGC
TCCCTTGGCTGATTGAAATCAATGCTTCAGGTGTCGTCCAGCGAGGCGGT
AACCGAAGCACTCCACGCCGTTCCGCCGCCGGCCAGGGCCGCCGCACCGT
TCTCCGCCAGACAGCTATTGGAGAAACCCGACGGAAGGCGTGTACCTAGC
ATTAGTAGCGGAGGTGCGGTACCCGGCAGTGGCACCGGTAGTGGCGACGA
AGACTTGTTGGTTAGGTTGCTATCGGATCGTCACAATCGGCATCCTGCAA
AGCAGGTTAAGGCAGAGGACGCGGGAGATTGCACATGGGACAGCGATGAA
CAAGCAACGCTTGCGTCATTGAAGACAGCAGCAGGCGCGCGTGGTGACAT
TGTTAATGGCGGTGGAAGCGACGGGGGATGTGCTTTGCCGATGCTTTGGC
CCCCTCCAAAGTCTTGCACGGTGCTTGGCGACGAAGTATGCCGTATACCT
GCGCGAGTCGTGGTAAGTTGCGCGTCGCCCACGACTGTTCGGCTTGATTA
TCAGCCTGTCAGTCATCGCCCTCCTCCTATCTCCGTACTTTGCGCTTTCG
CAGCGGTCGCCACCCTCTTTATTGCGTTTTGCTGAAAGTAGTCAGTCCAA
TCCGAGGCGCAAATGGACGTTTACGCCATTACCCGGCCACTCTGCAATAT
CTCGCTGACAAGGGAGCCTCTCGCTCTGATTGCCGTGCCCTGTACTCAAC
ACCTTGGACCCTTCCCGCTTCGCCCCGGCCCAAACTCTTGACCGCAAGTT
GGTGCTTCCAGCAGAGGGAGCGGCCGCTCCGGGGACACTCATATTCCAAA
CTCTACAAGCCGCGCTAAGTCATTGCGGCATTTCGATGATTTGCACGCGT
GGGAGGTGTCCTCCCGGGAGTGGTGGCGAATTCTTCATCACCCTCGCGTG
CGGGGGGTTGCAAGGAGCGTGCTCTACTTCATCGTCCGCAAGAGGCGGGC
AGGGGTTTAGCGTGGTGGTCGGATCGGGCATGGTCAGAGTAGCGGGGACG
GGAGAACCGGGCTTGTTCTACGGCGTCAGGACATTGTGCCAGCTGCTTCA
GTTTTACGCGATGCCGCTGCCGTCAAACGAGTCGGCTCTGGACATTCCCT
GCTGTATCCTGAAAGACGAGCCGGACGTGGTCCGGCGAAGTCTTGTCGTT
GACGCGCGGTGAGCAGAGGGCGCCTGTAGCAAACCAGCTGCAAAGCTCAC
CGGCGTCTTTGCCTGCCGTGTGTCTGCTGAAATGTATCATACAAATAGTT
GGATCGACTCCTTCCGGTTTGTACCCGGACCCCGCGCTTGGTCTTGTCCT
TGTAGTGGCAACATCGCAGCGGTTGGAACATTTTCCGGGCGTGAGGTCAA
TCACTTAGGATCTCTGATGCGGGGTCACTACGAAAGCTGTCGATGCTGCC
TGACTTTGCACGACACTCTGCGAGCTGTCTTTCAAATGTCTCCCCATCGT
TTCGCGCAAAAAGCTGCGGACATTATTAAGTGCTTTCGAAAGTCCACGTT
CGGAAGCAGGAGCTTGTCAAATTTCGCGTCTGTGCGGCAACTTTTCAGTA
CGCGCCTCATCGGTGAATGGCCTATGCGGCAGAGCTCCCGCCGTCACCCC
TTCCTACTCTCCGCACTACATGCGTTTCTTGTTTGGTTCTCTTTACTCCG
CGGCAGATATCCACTGCTGCCAACATTGCCGTCGCTTATGCGCACCATAG
AGGCCGCCTCACGCTCCCGCATCAACGTGATCCAGCTGACGGTCACGCGC
GAGACGGCGAGTTGGCTTGTCAGGCATGATCAGGACGGTGGCCGAACCAA
AGCTATCCCTGCAACCAGAGGTGATGAAGCAATGCTTTGCTTGAACGCAC
GCACCGTTCTCACGAGTATACCAAACACGTTGGAAAATGCAACATACGCC
GACGAGACTTGCAAACCAATTAATCATGCAGACCGCCAGGTTGACTGGGC
CCGATGGTGTTGCCTTATTTTTTAAGCCCGAGACAGTCACGGGGCGATTG
TCGATGTTTCGTCCGTGGTTCAGATCGTGTGCACGCGTCGCAATCCAAAT
GTTGTCCTCCGCAAGGAGGCTACTCTCGACTCCAACTACCACGTCCTCGT
GGCTGCACCACAACTTTCCCCGGCCATAACAGGAGGAGGTGCATTTCAAA
AATTGGGGCAAAGAGGGCTCCCAGACACCGATCTCGGAGAGAACGGGGCG
TGGGGATGGGGCGCCCTAGGGAAGATCGGGGCGTTTTGCATGGAGCACTT
TGTGGAGCTCGTTCTGGGGTGGGCAGTGGTCCCTGGAGACGAGCCAAGGT
GAGTAGGATGATTGCACTTTCCTTCGTGTAGTACTTGTCAGGCCTCGCCC
TTCGAAGCATTGGGCGTTTCCGTGTAGATCACCGCCGTGTTCCGGGATGC
TATGCAGAATTCGCACGAGAGCACGGAGAGACTGCGCGATGTTATATGTG
GCATGCGATCCCCATGGATTTGTGTCAAAGTCGCCAGTATTATTCGTTCA
ATTTCTAAACCCTCCAAGAGCATAAAAAATGACACAGATATTCAACCGTG
CAGCATCATTACGAACCCGTTCAGACAAGTGGGGCACACTCTGTCGTGCC
GCAGTTCAGCCACCCGACACTCGATGGGAGAAAGTCAACTGTGCCTCAAA
CGTGCACATCTCTTCCAGGGAAGCTCAACGCGCAGCAGTCCAGCTCCTGT
CGTCTCTCTCACGGCAGTTCCAAAGCGACGAAATGCACATTGTTTTCGAG
GAAGGAGTCCACCTCGCAGCCTTTGATGTGACGCCGGAAGCAATCCTCGA
CCGACCCGAAGAGAGAAGACGGCCGGAGGAGAACCCCGTCATTGGGGTAA
ATACGGGGACGGAAAAATCGCGAGAGCGGTTGTCTTCGTCGGAGCCTGGA
GATGCGCCGCATGCCGTGCCAACTTCGACAGACGGGGGAGAAGGGTTTTC
TCTGACCCGTTTCCTTAGCAACGTCGTAGTCGCATGTAGTCAGGTAACTG
GGCAACTTCAATCCTCTTTTTGGCTTAGGTCTCGTCACCAACCTCGCATC
CTGTTGAAAATCTCAGCCCAATTCCAAGCTGCTGCTGTCACACTTTGCAC
TGGAAATCTTTCGCTGCCGCGACGTATATCTGTGTTTCTCGGAGAGGGGT
TGCTTGAGTCATCAGCGGAACGTGTTGTCGGCGAATATGAATGCAGGGAC
ACCTCCAGCGGTTCTGTCGGAAAGTGCTGTAGCGTCACTGATTTCACATG
TGCGCTCGTTTTTGCGCTCGTTTACCTGCCCCACAAATCTCCTCGTAGTT
TGCGCGCGAGTCGCTTCTCCTCAGTGCTCAAAATGTTCGGGTATATTGCT
ATTTCCAAACAGAGAACGATCGTGTTGGACGGTATCCCCCCAGCGGTGTT
AGCATCGCTGCAGGGGGTCGGCTACCTGCCGGTGGAGCTGGCGTTCTCGA
TGGGCACCGACACGTTGAACGAACTCAGGTATTTTTCCTGCCTTGCCTAC
TGGACCCGCGGCAACAGCTGTACAGGGCGTGCTTTTAGGTCGCTGGAAAG
TCACGCGGGTTCCTGCCTGAGTTTGTAAGCCGTTCGGCTGCCAACGGGTC
TGCGACAGAATGAATCACACCCGGTTAAGCCTGCTGCCCCGATAAAAACA
AGCAGCAGGCGGCTCTCTCATTCCTTTCATCACGCCCGTGTTATGTCAGC
TCCATGTAGTACGAACCGTGCCTTCGGCCTTTATCCCGCTCTCCCCCATC
CCACTTTGATTTGATCGCGCTCATGTATTTCCCACACCATACCCCTGCCG
AATACAAAAACGCTTGTTCTTTCGCACCAGCTTCGGAGCGCTCTCGGAAG
ATGTTGTCATCAATGGTCGCTCCGACGATCTGGCGGTATTTCTAGGCCCG
GCGCACCTGGGTTACATTTGTGCGGGGCATCAAGGACCCGGGAGCGGAAG
ACGTGAGGAGGCGTGCTTCAGCATCCATGGAGCCCTTGCGGACGTGGCAA
AAGCCGTAGCCAAAGGTGGGCACGAGCTCTATCTATGCACTTCTCTCCTG
TCAACAAGGAACTGCCACCATATTTATATATTGCGGGCTTTGCTGCAATC
CTGTGTTCGGGACTGGCTGGGAACTTCTCGATTGCGTGTTGTGGCCAGTC
GTACGCTTGTGGCAATCTACACGCCATACTCTGATACATGAGCCCGCTGA
CGTGCATCCCCCACTTTTCGTTGTGCTCTGCGCCCCCGCACATCCAGCCC
GTCGCACGGGATGCGGCATGCAACTCAGGGTCAGCACCGCAACGGCAGCA
GGCATGAAGAATACATCGCCGAGGAATTCACGCCCTGCAGCTTTCAGTGA
CGCCACATGCGAAGGAGGAAATCTGTACTATCCCACTCTCCTCTCGAACG
CTCTCGAATTTCTCGCGGCCGGGCTGTGTTGGCGGCTCGACAAGGCGTCC
ACCGCTTTACACCTTTCGACTCCTGGAGGTGGAGCAGGGGAAGGGCGAGC
TGTTGTTGTTCGGGGCGATTCCGGCCTATCGACTGGCGGAGAGCGAGCTG
GTGAACGAAAACCCTCCGAAATGGGACCAAAGCCTCTGCGAGGGCCTTCA
GATCCCGCCACCTTGTTGTTGTCGCACATGCTGCGAGCCAACGACGCGGG
CACACAAGAGGCGGTTTCTTCTAGCCAGGTAGGCTGCAACGTGGAGGGAC
GGGGGATGCGTAGTGTGGGTGGCTTGATAGGTTGTTGTGAAAGGGCGGCT
TGATTCTACGCCTTCGACATAGAGGGGTACAACGGTGCAAGCACCACTCC
CTGAGTCGTGTTTCATCTATGTCATGTTTCACAGATGCTTGAGGTTTTTA
TGACGGCTTATTCGATTTCCCTCCTTCGTTTGCCCAGCCGTGAGTCCTCC
CGACTTTCGCAAACGAAGCCTTCTACCACAATTAAATACCATGTTTATTG
CTACTCCACTGTTGCCGGGAGAGAATCATCTCCATTACGAAAGATTGGTG
GAACGGGAGCCAAGGGTCCGCAGAAGCTTTCAGAGCCAAGGCGCGGCCGA
GACATGTGGTCTGCTGAGTGTTTAGCTCGACAGATGAAGCTGGCGTTGGT
TTGGCAAGGCATTTTTCCGCTTGACTTCTCGACGGCCACATCTCTTTCTC
TTCCAGCTGATTTCCTGCTTGAGGATGCTTCTTGAGAGCTGGGACCCATT
TCCATGCGACGAGGGGAGCTGCGGTGCTCGAGACAGGGAGAACGTGGTGA
TGCGTAATGTAAGGGCATGTGTTGCTGCACGAAGTTGAATTACTTGAGAA
AAGTCGACGGAATTTTATCGATTGCGGGATGATATCATTTACCTGCGCCT
GTCTTATTTGTCAGCTGGTCCGTTAAAAATATGAAAAGGTGCTCTCGAGA
GCAGAGCTGGTGCATTTGCGGCGTATCACGTGCTTCTTTGCATTCAAATG
AAGGACGTTTTCTTATGTGGCACGTCAATGGCGAAGAAGACCGACCGCCC
ACCTGTGTGGTCGTGGTGTCTCGACGAAAGGTTCTCTGCAGCTGGACAGC
TTCAAGCGTGCGCGTCTCTTGTTGAAGTTTGTTGGATTTTTTTAAGCATG
CACGCTCACGGTTGCGGTGTCAGTGTTACAACATGATGGTGCCGCATGTG
CACTGGTAAGTTGATGCCGGCGCTTGCACGTTTTTTACGCATGCCAGCTT
GATTGGAGGCTTCCCTCTAACATGACCTAGAATTTCGTTTCCATCTTTTC
CCTATCGAGATTAGCCTAACGTTAGTTAGCGTCGGCACGGCTGTGTCATC
CCCCTATCTGTTTGGTGCTAACCTCGCTTCCTAGTGACGTACACTCTCCT
CGCTATGTACTCCTGCTGTTGCCATTGCTTTTGTCACCTCTAAGCTTGAC
AGCGTCTTATGGGCGGTCCACGCACCGGGCGGGAACGGCAGTCTACACTT
TAGCGCCGACGACGATAGCAGGTGCATCGCCGTAACAGAAACGGAAGCCT
GAAAACTTTTGATTCTCTGCTGCGTCGCGTCCACGGAAGCTTTCGGGTGG
GCTTAAAATATTGTGGAGGCAGTTCACAACGCGATTGATATGTTAACCCG
CATTTTTTAGGGTTTACATCTGAAACGGTGTTTACCTCATCGGCCAGCGT
ACCGTCGCGTGAAACTATGGTGGCAAATCTCTCCGGGTCTGCATTTTCCT
TGGTACGCGAAATGACCGACACTAGTGGTCTCCCTGGCGACGGTTTCCCT
CTGTTCTGGGATAGTTGCCCGTAATCTCCCTCATCTTCGGGAAAGTTAGC
GGCAGGCTTCGGGCAACTTTATCGGAATCGGGATGAACAATGGTTGCGAG
GAAGTAAGCCAGGGCACCCTTGAAATTCTTTGTCACCGTCGTCGTCCTTC
CCACACCCTCTTGTGCAACTTGTGTCACATGTTCACCACGCCGCACGTGG
TGCACGTGCAAGATTTGTCTTGAGTGCGCTTCAGTCTAGGTATCTGCGCC
TGGAAGAGGCATTAAAAATTATGCCTGGAACCCTCGAGGCGGCCACGGCA
ATTCTTGCTCCGTTCATGGAGCTCCGTCGGGCGGTAAGGTAGGTTTACCC
CGGGAAGATCAGAGGTTGCGAAAGAAATCGAGCGCTAGCGTGCGTCTTGC
TTTCCTAACAATGACTGGGACTGAGCTCAGCATTAATTGGCTCGTTCGTG
CTGGACCAAACTTCGTACGTGTTAGTGGGGCATTTTCGATGAGCACTTTT
TGTTTTCTCTTGTCATCTCAACCGTAGGATTTGTCCACCGCAGACCGCAG
ACAAGATTCCCCCGCCGAAAGCATCCAAGAACTCTTCCCATCCCCCCTGC
TCCCCCTGTGTGCAACCACTTCTTGTTAATGCTTACCTTCCAGGGTGTTG
AAGGTCTCCGGGCGTCTTCTGCTAGCAGCCTACAACCACGTTTGCCGCCT
GGATCAGAGGGTGTCGAAAGAGCGTAGTAATAATTTGTACCTCGTCCGTT
CCCCTTCCACGGCGCCCACTTCAACGGGTCCGGGACTCGGTGACGGCCAG
CAAGACCGATACGACAGGCCTGCTTCCAACCAGCTTCCCACTTATGGGAA
TTCTGCCCGCCCAGCAGGCGCTGACATCGTTCCTCAAAGCGCCGGTAAGG
GGCCCCAGAACCGCGGCAGTAGAGAAGGGGTCAGGCGAAATCGGCGAAAC
CTGCAGAAGACGATGGCACAACTACCGTCATCCACGCGGCTAGACTTCGC
CAACCGCTACTTGGAGGTGCGGAATTTGATTCGAGGTGCTTTGCGGTTCC
GTAAAGGACTGTGGACACCATTGGGCGTGTATATTTGGTTTCTTCAAACT
GCCACCGGTCGATGCGGCAGAAAAATAATCCACCCGGCGCATTACCTCGT
GTGTGGACATTTTACAGTTCCTCAGCCCCATCTCTTTGTAAGTGATTCAC
CTCTCCCCTCAACCCCTGCTTTTTGCAGGAATTTCGCGCATTGAGCGCGT
CCTGGGACTCGACGACGTACCTGTCGATGGGTAAAATGGTCCTTCACTCC
TCCTTATCAGGCTTGCTCAGGAATCTTGCGCACGATGAATCCGCCGCCCA
GGTATCGCGTTCATATCGTTGCCTTGTAGCACGTGCACATTTGATCGTTG
TGCTCTCTCTAGCGTTCGTTCAAGTTTTACACCGCTGATGTGGCACGTAT
GAGGCTGACCGGATCATCAGCTTGTGCATACTTCGATGTCGTCTCCAACG
CTTTGACTCAGCGCTAAGTCGGCTTGTCATTTTGTTTCGCTTTCGTTTCG
CTTTCTTTTCAACGGCGGTCCTTCGTTCGTTTCTGTCGTGCAGATGAAGG
GACTCTGTGAAAGTACTATCTTCAACCGCTGAGGCCCTTCTTCGGGAAGT
GTGGACGAGAGGTATCCTTCGTGGGCAGCCTACCCCGGGTGGTCCTGATG
ACGTGGTGATGATTAGCCCTAAAGCAAAGCATTAAATGCCGTGTTGTGTC
GCGAGTCGAGGTGGTCCTTGCACAGTCATATCAAATATGTCAATATGGGA
TGGCACAGATTGCCTTGGTCTTGTGCTGGATGTTCAGCGAATGGAGTCCT
CATGCACTGGCGTTCATCGTTCCCGCTAGCGGTTTGATTTCCGCGAGGCT
GGCTGTGATAAAAACTGACCGTGTTCCATGAGTAGAGATCGAACGGACGG
GTGGCGCGTGTTTGTCATTTTTTCGTCGGACCCTATTCCGGAGGGAGACT
CTCCCTGCCCCACGTCCACAGGAACGTATTCTCAAGTGAGTTGCTCTACG
CACTGACTCAATTGGGGAGCGCATCCTTTCCGCGTCCCTCCGTTCGAAGC
TACAGCAACATTTTTTTTTCGAATTGAGCACATCTACTTCTCTCGCCAAT
GTGCCGTGACCAAGGCCACCACCGATGACACGTTCC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig11:3590339..3601774-

>mRNA_P-fluviatile_contig11.1308.1 ID=mRNA_P-fluviatile_contig11.1308.1|Name=mRNA_P-fluviatile_contig11.1308.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6156bp|location=Sequence derived from alignment at P-fluviatile_contig11:3590339..3601774- (Porterinema fluviatile SAG_2381)
ATGCTTTGGCCCCCTCCAAAGTCTTGCACGGTGCTTGGCGACGAAGTATG
CCGTATACCTGCGCGAGTCGTGATGCTTTGGCCCCCTCCAAAGTCTTGCA
CGGTGCTTGGCGACGAAGTATGCCGTATACCTGCGCGAGTCGTGTTGGTG
CTTCCAGCAGAGGGAGCGGCCGCTCCGGGGACACTCATATTCCAAACTCT
ACAAGCCGCGCTAAGTCATTGCGGCATTTCGATGATTTGCACGCGTGGGA
GGTGTCCTCCCGGGAGTGGTGGCGAATTCTTCATCACCCTCGCGTGCGGG
GGGTTGCAAGGAGCGTGCTCTACTTCATCGTCCGCAAGAGGCGGGCAGGG
GTTTAGCGTGGTGGTCGGATCGGGCATGGTCAGAGTAGCGGGGACGGGAG
AACCGGGCTTGTTCTACGGCGTCAGGACATTGTGCCAGCTGCTTCAGTTT
TACGCGATGCCGCTGCCGTCAAACGAGTCGGCTCTGGACATTCCCTGCTG
TATCCTGAAAGACGAGCCGGACGTGGTCCGGCGAAGTCTTGTCGTTGACG
CGCGTTGGTGCTTCCAGCAGAGGGAGCGGCCGCTCCGGGGACACTCATAT
TCCAAACTCTACAAGCCGCGCTAAGTCATTGCGGCATTTCGATGATTTGC
ACGCGTGGGAGGTGTCCTCCCGGGAGTGGTGGCGAATTCTTCATCACCCT
CGCGTGCGGGGGGTTGCAAGGAGCGTGCTCTACTTCATCGTCCGCAAGAG
GCGGGCAGGGGTTTAGCGTGGTGGTCGGATCGGGCATGGTCAGAGTAGCG
GGGACGGGAGAACCGGGCTTGTTCTACGGCGTCAGGACATTGTGCCAGCT
GCTTCAGTTTTACGCGATGCCGCTGCCGTCAAACGAGTCGGCTCTGGACA
TTCCCTGCTGTATCCTGAAAGACGAGCCGGACGTGGTCCGGCGAAGTCTT
GTCGTTGACGCGCGATATCCACTGCTGCCAACATTGCCGTCGCTTATGCG
CACCATAGAGGCCGCCTCACGCTCCCGCATCAACGTGATCCAGCTGACGG
TCACGCGCGAGACGGCGAGTTGGCTTGTCAGGCATGATCAGGACGGTGGC
CGAACCAAAGCTATCCCTGCAACCAGAGATATCCACTGCTGCCAACATTG
CCGTCGCTTATGCGCACCATAGAGGCCGCCTCACGCTCCCGCATCAACGT
GATCCAGCTGACGGTCACGCGCGAGACGGCGAGTTGGCTTGTCAGGCATG
ATCAGGACGGTGGCCGAACCAAAGCTATCCCTGCAACCAGAGGAGGAGGT
GCATTTCAAAAATTGGGGCAAAGAGGGCTCCCAGACACCGATCTCGGAGA
GAACGGGGCGTGGGGATGGGGCGCCCTAGGGAAGATCGGGGCGTTTTGCA
TGGAGCACTTTGTGGAGCTCGTTCTGGGGTGGGCAGTGGTCCCTGGAGAC
GAGCCAAGGAGGAGGTGCATTTCAAAAATTGGGGCAAAGAGGGCTCCCAG
ACACCGATCTCGGAGAGAACGGGGCGTGGGGATGGGGCGCCCTAGGGAAG
ATCGGGGCGTTTTGCATGGAGCACTTTGTGGAGCTCGTTCTGGGGTGGGC
AGTGGTCCCTGGAGACGAGCCAAGGGAAGCTCAACGCGCAGCAGTCCAGC
TCCTGTCGTCTCTCTCACGGCAGTTCCAAAGCGACGAAATGCACATTGTT
TTCGAGGAAGGAGTCCACCTCGCAGCCTTTGATGTGACGCCGGAAGCAAT
CCTCGACCGACCCGAAGAGAGAAGACGGCCGGAGGAGAACCCCGTCATTG
GGGTAAATACGGGGACGGAAAAATCGCGAGAGCGGTTGTCTTCGTCGGAG
CCTGGAGATGCGCCGCATGCCGTGCCAACTTCGACAGACGGGGGAGAAGG
GTTTTCTCTGACCCGTTTCCTTAGCAACGTCGTAGTCGCATGTAGTCAGG
TAACTGGGCAACTTCAATCCTCTTTTTGGCTTAGGTCTCGTCACCAACCT
CGCATCCTGTTGAAAATCTCAGCCCAATTCCAAGCTGCTGCTGTCACACT
TTGCACTGGAAATCTTTCGCTGCCGCGACGTATATCTGTGTTTCTCGGAG
AGGGGTTGCTTGAGTCATCAGCGGAACGTGTTGTCGGCGAATATGAATGC
AGGGACACCTCCAGCGGTTCTGTCGGAAAGTGCTGTAGCGTCACTGATTT
CACATGTGCGCTCGTTTTTGCGCTCGTTTACCTGCCCCACAAATCTCCTC
GTAGTTTGCGCGCGAGTCGCTTCTCCTCAGTGCTCAAAATGTTCGGGTAT
ATTGCTATTTCCAAACAGAGAACGATCGTGTTGGACGGTATCCCCCCAGC
GGTGTTAGCATCGCTGCAGGGGGTCGGCTACCTGCCGGTGGAGCTGGCGT
TCTCGATGGGCACCGACACGTTGAACGAACTCAGGGAAGCTCAACGCGCA
GCAGTCCAGCTCCTGTCGTCTCTCTCACGGCAGTTCCAAAGCGACGAAAT
GCACATTGTTTTCGAGGAAGGAGTCCACCTCGCAGCCTTTGATGTGACGC
CGGAAGCAATCCTCGACCGACCCGAAGAGAGAAGACGGCCGGAGGAGAAC
CCCGTCATTGGGGTAAATACGGGGACGGAAAAATCGCGAGAGCGGTTGTC
TTCGTCGGAGCCTGGAGATGCGCCGCATGCCGTGCCAACTTCGACAGACG
GGGGAGAAGGGTTTTCTCTGACCCGTTTCCTTAGCAACGTCGTAGTCGCA
TGTAGTCAGGTAACTGGGCAACTTCAATCCTCTTTTTGGCTTAGGTCTCG
TCACCAACCTCGCATCCTGTTGAAAATCTCAGCCCAATTCCAAGCTGCTG
CTGTCACACTTTGCACTGGAAATCTTTCGCTGCCGCGACGTATATCTGTG
TTTCTCGGAGAGGGGTTGCTTGAGTCATCAGCGGAACGTGTTGTCGGCGA
ATATGAATGCAGGGACACCTCCAGCGGTTCTGTCGGAAAGTGCTGTAGCG
TCACTGATTTCACATGTGCGCTCGTTTTTGCGCTCGTTTACCTGCCCCAC
AAATCTCCTCGTAGTTTGCGCGCGAGTCGCTTCTCCTCAGTGCTCAAAAT
GTTCGGGTATATTGCTATTTCCAAACAGAGAACGATCGTGTTGGACGGTA
TCCCCCCAGCGGTGTTAGCATCGCTGCAGGGGGTCGGCTACCTGCCGGTG
GAGCTGGCGTTCTCGATGGGCACCGACACGTTGAACGAACTCAGCTTCGG
AGCGCTCTCGGAAGATGTTGTCATCAATGGTCGCTCCGACGATCTGGCGG
TATTTCTAGGCCCGGCGCACCTGGGTTACATTTGTGCGGGGCATCAAGGA
CCCGGGAGCGGAAGACGTGAGGAGGCGTGCTTCAGCATCCATGGAGCCCT
TGCGGACGTGGCAAAAGCCGTAGCCAAAGCTTCGGAGCGCTCTCGGAAGA
TGTTGTCATCAATGGTCGCTCCGACGATCTGGCGGTATTTCTAGGCCCGG
CGCACCTGGGTTACATTTGTGCGGGGCATCAAGGACCCGGGAGCGGAAGA
CGTGAGGAGGCGTGCTTCAGCATCCATGGAGCCCTTGCGGACGTGGCAAA
AGCCGTAGCCAAAGCCCGTCGCACGGGATGCGGCATGCAACTCAGGGTCA
GCACCGCAACGGCAGCAGGCATGAAGAATACATCGCCGAGGAATTCACGC
CCTGCAGCTTTCAGTGACGCCACATGCGAAGGAGGAAATCTGTACTATCC
CACTCTCCTCTCGAACGCTCTCGAATTTCTCGCGGCCGGGCTGTGTTGGC
GGCTCGACAAGGCGTCCACCGCTTTACACCTTTCGACTCCTGGAGGTGGA
GCAGGGGAAGGGCGAGCTGTTGTTGTTCGGGGCGATTCCGGCCTATCGAC
TGGCGGAGAGCGAGCTGGTGAACGAAAACCCTCCGAAATGGGACCAAAGC
CTCTGCGAGGGCCTTCAGATCCCGCCACCTTGTTGTTGTCGCACATGCTG
CGAGCCAACGACGCGGGCACACAAGAGGCGGTTTCTTCTAGCCAGCCCGT
CGCACGGGATGCGGCATGCAACTCAGGGTCAGCACCGCAACGGCAGCAGG
CATGAAGAATACATCGCCGAGGAATTCACGCCCTGCAGCTTTCAGTGACG
CCACATGCGAAGGAGGAAATCTGTACTATCCCACTCTCCTCTCGAACGCT
CTCGAATTTCTCGCGGCCGGGCTGTGTTGGCGGCTCGACAAGGCGTCCAC
CGCTTTACACCTTTCGACTCCTGGAGGTGGAGCAGGGGAAGGGCGAGCTG
TTGTTGTTCGGGGCGATTCCGGCCTATCGACTGGCGGAGAGCGAGCTGGT
GAACGAAAACCCTCCGAAATGGGACCAAAGCCTCTGCGAGGGCCTTCAGA
TCCCGCCACCTTGTTGTTGTCGCACATGCTGCGAGCCAACGACGCGGGCA
CACAAGAGGCGGTTTCTTCTAGCCAGCTGATTTCCTGCTTGAGGATGCTT
CTTGAGAGCTGGGACCCATTTCCATGCGACGAGGGGAGCTGCGGTGCTCG
AGACAGGGAGAACGTGGTGATGCGTAATCTGATTTCCTGCTTGAGGATGC
TTCTTGAGAGCTGGGACCCATTTCCATGCGACGAGGGGAGCTGCGGTGCT
CGAGACAGGGAGAACGTGGTGATGCGTAATCTTGACAGCGTCTTATGGGC
GGTCCACGCACCGGGCGGGAACGGCAGTCTACACTTTAGCGCCGACGACG
ATAGCAGCTTGACAGCGTCTTATGGGCGGTCCACGCACCGGGCGGGAACG
GCAGTCTACACTTTAGCGCCGACGACGATAGCAGATTTGTCTTGAGTGCG
CTTCAGTCTAGGTATCTGCGCCTGGAAGAGGCATTAAAAATTATGCCTGG
AACCCTCGAGGCGGCCACGGCAATTCTTGCTCCGTTCATGGAGCTCCGTC
GGGCGGTAAGATTTGTCTTGAGTGCGCTTCAGTCTAGGTATCTGCGCCTG
GAAGAGGCATTAAAAATTATGCCTGGAACCCTCGAGGCGGCCACGGCAAT
TCTTGCTCCGTTCATGGAGCTCCGTCGGGCGGTAAGGGTGTTGAAGGTCT
CCGGGCGTCTTCTGCTAGCAGCCTACAACCACGTTTGCCGCCTGGATCAG
AGGGTGTCGAAAGAGCGTAGTAATAATTTGTACCTCGTCCGTTCCCCTTC
CACGGCGCCCACTTCAACGGGTCCGGGACTCGGTGACGGCCAGCAAGACC
GATACGACAGGCCTGCTTCCAACCAGCTTCCCACTTATGGGAATTCTGCC
CGCCCAGCAGGCGCTGACATCGTTCCTCAAAGCGCCGGTAAGGGGCCCCA
GAACCGCGGCAGTAGAGAAGGGGTCAGGCGAAATCGGCGAAACCTGCAGA
AGACGATGGCACAACTACCGTCATCCACGCGGCTAGACTTCGCCAACCGC
TACTTGGAGGGTGTTGAAGGTCTCCGGGCGTCTTCTGCTAGCAGCCTACA
ACCACGTTTGCCGCCTGGATCAGAGGGTGTCGAAAGAGCGTAGTAATAAT
TTGTACCTCGTCCGTTCCCCTTCCACGGCGCCCACTTCAACGGGTCCGGG
ACTCGGTGACGGCCAGCAAGACCGATACGACAGGCCTGCTTCCAACCAGC
TTCCCACTTATGGGAATTCTGCCCGCCCAGCAGGCGCTGACATCGTTCCT
CAAAGCGCCGGTAAGGGGCCCCAGAACCGCGGCAGTAGAGAAGGGGTCAG
GCGAAATCGGCGAAACCTGCAGAAGACGATGGCACAACTACCGTCATCCA
CGCGGCTAGACTTCGCCAACCGCTACTTGGAGGAATTTCGCGCATTGAGC
GCGTCCTGGGACTCGACGACGTACCTGTCGATGGGTAAAATGGTCCTTCA
CTCCTCCTTATCAGGCTTGCTCAGGAATCTTGCGCACGATGAATCCGCCG
CCCAGGAATTTCGCGCATTGAGCGCGTCCTGGGACTCGACGACGTACCTG
TCGATGGGTAAAATGGTCCTTCACTCCTCCTTATCAGGCTTGCTCAGGAA
TCTTGCGCACGATGAATCCGCCGCCCAGATGAAGGGACTCTGTGAAAGTA
CTATCTTCAACCGCTGAATGAAGGGACTCTGTGAAAGTACTATCTTCAAC
CGCTGA
back to top