prot_P-fluviatile_contig11.1241.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig11.1241.1
Unique Nameprot_P-fluviatile_contig11.1241.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length165
Homology
BLAST of mRNA_P-fluviatile_contig11.1241.1 vs. uniprot
Match: A0A835YJ53_9STRA (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ53_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.210e-37
Identity = 62/110 (56.36%), Postives = 76/110 (69.09%), Query Frame = 0
Query:   43 WEKCLAASEEKLLVIDCHQEWCGRCETLQPTFLRISLETTDCENRCLFLEANLDKFAHRVQALLPKDTTVNLATQGCMPFTALIKGGVTVASISGCDAPAILRQVNKHMP 152
            W K LA+S+EKL+VID HQ+WCG CETLQPT  RI+L+TTDC NRC F  A++ K   +V  LL  D    L  +GCMPF AL+KGG  VA++SG DAP +L  V  H P
Sbjct:    1 WSKVLASSKEKLIVIDIHQDWCGPCETLQPTMHRIALDTTDCANRCGFFSASMGKLKAQVGELLSADARAALEKRGCMPFFALVKGGAVVATVSGADAPLLLSLVKAHTP 110          
BLAST of mRNA_P-fluviatile_contig11.1241.1 vs. uniprot
Match: A0A7S2CQY2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CQY2_9STRA)

HSP 1 Score: 126 bits (316), Expect = 2.960e-34
Identity = 58/132 (43.94%), Postives = 90/132 (68.18%), Query Frame = 0
Query:   30 SLVRTITEEGEFSWEKCLAASEEKLLVIDCHQEWCGRCETLQPTFLRISLETTDCENRCLFLEANLDKFAHRVQALLPKDTTVNLATQGCMPFTALIKGGVTVASISGCDAPAILRQVNKHMPPLRTGDDKA 161
            +LV+ I  E E +W++ +  S + LLV+DCHQ+WCG+CETLQPTFLRI ++  + E+R  FL AN+  F  +++A+LP+D+ ++L   GCMPF  LI+    VA++ G ++P+IL  V  ++P    GD +A
Sbjct:    7 NLVKVI--ETEEAWDEWMGKSGDMLLVLDCHQDWCGQCETLQPTFLRIFMDNDEPESRLAFLSANIKVFKDKIKAILPEDSQISLDEHGCMPFFLLIRSNAVVANVIGANSPSILMNVQGNIPAKPEGDVEA 136          
BLAST of mRNA_P-fluviatile_contig11.1241.1 vs. uniprot
Match: A0A4Q6B0Z1_9SPHI (Thioredoxin domain-containing protein n=1 Tax=Sphingobacteriales bacterium TaxID=2044944 RepID=A0A4Q6B0Z1_9SPHI)

HSP 1 Score: 88.2 bits (217), Expect = 8.160e-19
Identity = 36/90 (40.00%), Postives = 56/90 (62.22%), Query Frame = 0
Query:   38 EGEFSWEKCLAASEEKLLVIDCHQEWCGRCETLQPTFLRISLETTDCENRCLFLEANLDKFAHRVQALLPKDTTVNLATQGCMPFTALIK 127
            E E  WE  +  SE KL+VIDCHQEWCG CE + P+  R+ L+  + + R ++  A++ K   ++QA LP+D  ++L   GC+P  A+ +
Sbjct:   83 EDEQQWESVVEQSESKLVVIDCHQEWCGNCEAILPSMTRVLLDYDNIDERFVYATASIGKVGAQIQAALPQDAHISLEKNGCLPLFAVFR 172          
BLAST of mRNA_P-fluviatile_contig11.1241.1 vs. uniprot
Match: A0A8J2SPW4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SPW4_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.960e-16
Identity = 39/107 (36.45%), Postives = 60/107 (56.07%), Query Frame = 0
Query:   47 LAASEEKLLVIDCHQEWCGRCETLQPTFLRISLETTDCENRCLFLEANLDKFAHR-VQALLPKDTTVNLATQGCMPFTALIKGGVTVASISGCDAPAILRQVNKHMP 152
            L  SE  L+V+D HQ WCG C+T++PT+  I  E  +CE++  F  A++     + V+ +  K + ++LA  GCMPF  L+K    VA + G D P +   V  + P
Sbjct:   19 LEKSETVLVVMDVHQNWCGPCDTMKPTYNSIFNEIDNCEDKVAFTTADIKTLTPQLVELMATKPSDLDLANHGCMPFFLLVKNKAVVAIVLGADVPTLRDNVVLYAP 125          
BLAST of mRNA_P-fluviatile_contig11.1241.1 vs. uniprot
Match: A0A0G4I1W7_9ALVE (Thioredoxin domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I1W7_9ALVE)

HSP 1 Score: 60.1 bits (144), Expect = 1.170e-8
Identity = 34/109 (31.19%), Postives = 52/109 (47.71%), Query Frame = 0
Query:   50 SEEKLLVIDCHQEWCGRCETLQPTFLRISLETTDCENRCLFLEANLDKFAHRVQALLPKDTTVNLATQGCMPFTALIKGGVTVASISGCDAPAILRQVNKHMPPLRTGD 158
            S+ +L V+D H  WCG C+ + PT+  + L   + ++R   +  + +K A          T        C  F    KGG  V ++ G +APAILR +  H+PPL   D
Sbjct:   24 SDPRLHVVDVHATWCGPCKQMIPTWKSLQLNYDNFDDRINLVICDAEKIA----------TFEKYKGTACPRFI-FYKGGKEVENVEGANAPAILRAIEHHVPPLEQED 121          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1241.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835YJ53_9STRA1.210e-3756.36Thioredoxin domain-containing protein (Fragment) n... [more]
A0A7S2CQY2_9STRA2.960e-3443.94Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A4Q6B0Z1_9SPHI8.160e-1940.00Thioredoxin domain-containing protein n=1 Tax=Sphi... [more]
A0A8J2SPW4_9STRA2.960e-1636.45Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A0G4I1W7_9ALVE1.170e-831.19Thioredoxin domain-containing protein n=1 Tax=Chro... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 42..101
e-value: 3.8E-6
score: 26.8
NoneNo IPR availableGENE3D3.40.30.10coord: 28..155
e-value: 2.6E-9
score: 38.8
NoneNo IPR availablePANTHERPTHR10438:SF403coord: 27..154
NoneNo IPR availablePANTHERPTHR10438THIOREDOXINcoord: 27..154
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 42..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:2864244..2867371 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1241.1mRNA_P-fluviatile_contig11.1241.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig11 2864244..2867371 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig11.1241.1 ID=prot_P-fluviatile_contig11.1241.1|Name=mRNA_P-fluviatile_contig11.1241.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=165bp
ATASLACFQLRHLTKRCPILDAMAPGVGDSLVRTITEEGEFSWEKCLAAS
EEKLLVIDCHQEWCGRCETLQPTFLRISLETTDCENRCLFLEANLDKFAH
RVQALLPKDTTVNLATQGCMPFTALIKGGVTVASISGCDAPAILRQVNKH
MPPLRTGDDKAEPE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf