prot_P-fluviatile_contig11.1222.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig11.1222.1
Unique Nameprot_P-fluviatile_contig11.1222.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length306
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig11.1222.1 vs. uniprot
Match: D8LKE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKE5_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 2.130e-18
Identity = 78/192 (40.62%), Postives = 102/192 (53.12%), Query Frame = 0 
Query:  136 RGRSRRRPLSWHCRQDAA-----RPCPPASAYSAPFGPLSPAPSNTITENDSSSY-STARRRSSGESSALAYGGHKISSSSYDACAA---ATPAAVATPAGLEKSWQN-------GRGRRR------TGKTRGDGATRGETRGESIDAKELFRRKNKMATWNLTYGRWVESYDRSMARRASIERREHIETQR 305
            RGR+RRR LSWHCR+        R  PPA+  +       P+PS   + N+++     + R + G  S             Y  C +   +T    +  +G E + +         RGRRR       GK RG G   G   GESIDA+ELFRRKNKMA +N+TYGRW ESYDR+MARRAS+ERRE +E +R
Sbjct:  190 RGRTRRRSLSWHCREKLGGDLQQRQQPPATTPTYSSSAFCPSPSAFSSYNNANMLIDNSSRINDGSCSCCT-----TPRQQYFCCESMLRSTNCGSSVSSGNEAAGEREGGTRREARGRRRGRSAGEPGKERGSG---GAGCGESIDAEELFRRKNKMACFNVTYGRWAESYDRAMARRASLERRERLEIER 373
[Close]
BLAST of mRNA_P-fluviatile_contig11.1222.1 vs. uniprot
Match: A0A6H5JDG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDG8_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 2.040e-15
Identity = 77/194 (39.69%), Postives = 102/194 (52.58%), Query Frame = 0 
Query:  136 RGRSRRRPLSWHCRQD------------AARP-------CPPASAYSAPFGPLSPAPSNT--ITENDSSSYSTARRRSSGESSALAYGGHKISSSSYDACAAATPAAVATPAGLEKSWQNGRGRRRT---GKTRGDGATRGETRGESIDAKELFRRKNKMATWNLTYGRWVESYDRSMARRASIERREHIETQR 305
            RGR+R R LSWHCRQ             A  P       CP  SA+S+ +   +    N+  I + + S  +T R++     S L       S+S   + ++   +A     G  +  +  RGR      GK RG G   G    ESIDA+ELFRRKNKMA++N+TYGRW ESYDR MARRAS+ERRE +E +R
Sbjct:   83 RGRTRERSLSWHCRQKLGGDLQQXXXXXATTPTYSSSAFCPSPSAFSS-YNNTNMLIDNSGRINDGNCSCCTTPRQQYFCCESMLR------STSCGSSISSGNESAGEREGGTSREARGRRGRSAGEPGGKERGSG---GAGCRESIDAEELFRRKNKMASFNVTYGRWAESYDRGMARRASLERRERLEIER 266
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKE5_ECTSI2.130e-1840.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDG8_9PHAE2.040e-1539.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:2681891..2683688 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1222.1mRNA_P-fluviatile_contig11.1222.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig11 2681891..2683776 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig11.1222.1 ID=prot_P-fluviatile_contig11.1222.1|Name=mRNA_P-fluviatile_contig11.1222.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=306bp
MPTRDYDPRRYGPTTNTRVSAISLGLHPATAVLSKSHREARTATRASRGR
ATRATRMALPAQEKRRVDAKQPPPLLSSVNTASTETPTTSFESTTAMADT
TGSDSFYDVGDEGDDDDDDDDDDDDDDDCAGSPGRRGRSRRRPLSWHCRQ
DAARPCPPASAYSAPFGPLSPAPSNTITENDSSSYSTARRRSSGESSALA
YGGHKISSSSYDACAAATPAAVATPAGLEKSWQNGRGRRRTGKTRGDGAT
RGETRGESIDAKELFRRKNKMATWNLTYGRWVESYDRSMARRASIERREH
IETQRR
back to top