prot_P-fluviatile_contig11.1089.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig11.1089.1
Unique Nameprot_P-fluviatile_contig11.1089.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length156
Homology
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BLAST of mRNA_P-fluviatile_contig11.1089.1 vs. uniprot
Match: D7FXX5_ECTSI (RING Zn finger-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXX5_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 1.980e-64
Identity = 100/112 (89.29%), Postives = 107/112 (95.54%), Query Frame = 0 
Query:   44 VSSDHIVAEETKTLSEPARRWAKLRKNFRLAALRSIAQDKREALQKLQEVRKRADKAQEAQSDSRTCKICWDRATNTVCLDCGHQCMCTRCGACMTFCPICMQDISDLVELQ 155
            +S+   VA+ET+ LSEPARRW KLR+NFRLAALRSIAQDKREAL+KLQEVRKRADKAQEAQSDSRTCKICWDRATNTVCLDCGHQCMCTRCGACMTFCPICMQDI+DLVELQ
Sbjct:   50 ISTTDAVAKETEYLSEPARRWTKLRQNFRLAALRSIAQDKREALKKLQEVRKRADKAQEAQSDSRTCKICWDRATNTVCLDCGHQCMCTRCGACMTFCPICMQDITDLVELQ 161
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BLAST of mRNA_P-fluviatile_contig11.1089.1 vs. uniprot
Match: A0A672MM86_SINGR (Ring finger protein 34 n=35 Tax=Cypriniformes TaxID=7952 RepID=A0A672MM86_SINGR)

HSP 1 Score: 54.3 bits (129), Expect = 1.130e-5
Identity = 22/50 (44.00%), Postives = 30/50 (60.00%), Query Frame = 0 
Query:  105 SDSRTCKICWDRATNTVCLDCGHQCMCTRCGACMTFCPICMQDISDLVEL 154
            +D   C+IC D   + V L+CGH   CT+CG CM+ CPIC Q +   V +
Sbjct:  312 NDDNLCRICMDAIIDCVLLECGHMVTCTKCGKCMSECPICRQYVIRAVHV 361
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1089.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXX5_ECTSI1.980e-6489.29RING Zn finger-containing protein n=2 Tax=Ectocarp... [more]
A0A672MM86_SINGR1.130e-544.00Ring finger protein 34 n=35 Tax=Cypriniformes TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 73..103
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 107..150
e-value: 1.3E-8
score: 34.5
NoneNo IPR availablePANTHERPTHR14879CASPASE REGULATOR, RING FINGER DOMAIN-CONTAININGcoord: 45..153
IPR017066E3 ubiquitin-protein ligase BOI-likePIRSFPIRSF036836SBP1_RNase_bindcoord: 66..152
e-value: 1.4E-7
score: 29.5
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 83..154
e-value: 3.8E-13
score: 50.6
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 131..142
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 110..144
score: 9.908

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:1210771..1212970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1089.1mRNA_P-fluviatile_contig11.1089.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig11 1209427..1213686 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig11.1089.1 ID=prot_P-fluviatile_contig11.1089.1|Name=mRNA_P-fluviatile_contig11.1089.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=156bp
MSPEPSSPHGTQGLHERNGIFLSNSIAVFPTNFACGLCAVSSTVSSDHIV
AEETKTLSEPARRWAKLRKNFRLAALRSIAQDKREALQKLQEVRKRADKA
QEAQSDSRTCKICWDRATNTVCLDCGHQCMCTRCGACMTFCPICMQDISD
LVELQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017066E3ligase_BOI-like
IPR013083Znf_RING/FYVE/PHD
IPR0179004Fe4S_Fe_S_CS
IPR001841Znf_RING