prot_P-fluviatile_contig11.1015.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig11.1015.1
Unique Nameprot_P-fluviatile_contig11.1015.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1245
Homology
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BLAST of mRNA_P-fluviatile_contig11.1015.1 vs. uniprot
Match: D8LLG9_ECTSI (PPR_long domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLG9_ECTSI)

HSP 1 Score: 622 bits (1605), Expect = 7.920e-200
Identity = 735/1182 (62.18%), Postives = 812/1182 (68.70%), Query Frame = 0 
Query:   62 MTMFARPTADASASSRAEDARATRLEEARKLVRARRKEVKDRKATVEAETASXXXXXXXXXXXXXXXXXXXXXATEDSRSXXXXXXXXXXXXGDTATTRTKWLPRFRTQTSASASAMADSSSRY-SSGSVTP-------GYSPRARSGAVARGAKVTGARGARGGVKRRRVLPDFTEVVVXXXXXXXXXXXXXXALDGRDNAALVAAIQATLDQTVAQLAAQE----APVRGALPSLPHGIPQEGWLRVVGLIRRAC----RDEDXXXXXXXXXXXXXXXXXXXXXXXXXXRIAFELALQVCVLCQRPDAGLEVLDLMRSTGLQTDLKAYKTVLKDYPGNRKQGRALFTMQMMTAVHAAGLVPDIDMLSSAMDACFKARDTEGAMHFMDQATRLGLEPDDSMFEEAIIAFSLAGKWLEARDLAVQWRKQASAAAVAASGDAGSVDVGPTASDRRSVSPPXXXXXXACNTALLKAMAKAGEVDEALGWLEETCNTAAAAXXXXXXXXXXXXXXXXXXXXXXEGSPVVPVGLDHSSFMAVLSACSKAGMWQSAISVLGEMDRVGLVPETVAYNTVLAAFEHRPHP--SEAGGIGAKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXLINVLRRGGQREKALEIFEGMESKGGGENAVEGAVRXXXXXXXXXXXXXXXXXXXXXXXXXXXEMRRKGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKANKGGVNAGPDIITFTSXXXXXXXXXXXXXXXXXXXXMREAGPRTQXXXXXXXXXXXXXXXXXXXXXXXXXHSKLLEEGLTPDQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELITSLSDRGRWDEAERVVRVAERTGAIPASSLDSSFEVDVSHLPAAIAKVKVRSTLRKILSVWEESS---KGEGA----LEDLVFVTGTGSGTKLPTAAAAASPWDDDA--DGGTVIDLADGNTXXXXXXXXXXXXXEPARADXXXXXSLPAAGRVVGGTAAASARVTATALSMAGLGGWRAARYSDRSFSLGKMLAEHLRTSFEPPLKARPGEAVAGCLVVKAEDLE 1216
            MTM A  TAD  +    E+A  +RLEEAR LVRARR+E K R+A        XXXXXXXXXXXXXX        T+ +                +A+TR+      RT     AS    SSSR+ SSG+++        G  PR R GA +RGA+  G +G   GVKRRRVLPDFT+                 A+   D+  LVAAI+ATLDQT AQLA ++    A   G LPSL HG  Q+GWLRV+GLIRRAC      +                      XXXX R+AFELAL+VCVLC+RPDAGLEVL LMRSTGLQ DL  YKTVLK Y  NRKQG+ALFT+Q M+AV  AGLV DI+MLS+AMDAC KARDTEGA+HFMDQA RLGL+PDD+MF EAI+A+SLAGKW+EARDLA+QWR QA + A                       PP       CNTA+LKAM KAG+VDEA+ WL +T + A A                       +GS    V LDHSSFMAVLSACSKAG W SA+SVL EMDR G+ PETVA+NTVLAAFEHR H   S +GG  AKRE                            LINVLR GGQR++ALEI +GM +KGG      G   XXXXXXXXXXXXXXXXXXXXXXXX   EMRRKGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKANKGGVNAGPD++T   XXXXXXXXXXXXXXXXXXXXMREAGPRTQXXXXXXXXXXXXXXXXXXXXXXXXX SKLLEEG++PD A  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   GELI+SLSDRGRWD+A+RVV +AE+TGAIPASSLDS FEVDVS LP AIAKVK R TL++IL VW ESS   +G GA    LEDLVFVTGTGS TK   A   A+PW  D   D G+  D  D                E ARA+  XXXS   A     GTAA+ A         AG GGWR AR+SDRSF LG++L EHLRT+F PPLKA+P E VAGCLVVK EDLE
Sbjct:    1 MTMLASSTADEKSL---EEAHTSRLEEARMLVRARRQEAKARQAAXXXXXXXXXXXXXXXXXXXXXTAKDPAAPTKPT--------LPGSGVSSSASTRS------RTSNVDVASGGKKSSSRFRSSGAISSNSRGTRGGVYPRGRPGAESRGARGPGGKGF--GVKRRRVLPDFTKAT------KATAVPVLAAVGDGDDTGLVAAIRATLDQTRAQLAGRKPSTSAAAGGVLPSLTHGATQQGWLRVIGLIRRACGGTEESDRGSSGGPNGAAPGGVESSGVPPXXXXPRVAFELALEVCVLCERPDAGLEVLSLMRSTGLQADLDDYKTVLKGYSANRKQGKALFTVQTMSAVQQAGLVADIEMLSAAMDACSKARDTEGAVHFMDQAIRLGLKPDDTMFREAILAYSLAGKWVEARDLALQWRGQAPSPASXXXXXXXXXXXXXXXXXXSRPPPPTV-----CNTAILKAMGKAGKVDEAIAWLGDTYDAATATATAASGAGTTEDE---------QGSVRGFVCLDHSSFMAVLSACSKAGRWGSALSVLREMDRAGVTPETVAFNTVLAAFEHRAHSGGSSSGGGAAKREAPRWPMALELLADMERRGVEPDVVTYNSLINVLRWGGQRDRALEILDGMNAKGGA-----GXXXXXXXXXXXXXXXXXXXXXXXXXXXLIGEMRRKGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKANKGGVNAGPDMVTXXXXXXXXXXXXXXXXXXXXXXXMREAGPRTQXXXXXXXXXXXXXXXXXXXXXXXXXXSKLLEEGMSPDPASFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVGELISSLSDRGRWDDAQRVVEIAEKTGAIPASSLDSDFEVDVSQLPPAIAKVKARGTLQRILDVWRESSGNAEGGGATSSPLEDLVFVTGTGSATKPSPAPDTAAPWAGDVIDDDGSAGDGKDIVIDVTVSDDTSTTSTESARAEPTXXXS---ASVETMGTAASGAA--------AGRGGWRVARFSDRSFGLGRVLVEHLRTAFNPPLKAQPREFVAGCLVVKVEDLE 1127
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BLAST of mRNA_P-fluviatile_contig11.1015.1 vs. uniprot
Match: A0A835YR37_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR37_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.710e-6
Identity = 37/85 (43.53%), Postives = 51/85 (60.00%), Query Frame = 0 
Query:  998 LITSLSDRGRWDEAERVVRVAERTGAIPASSLDSSFEVDVSHLPAAIAKVKVRSTLRKILSVWEESSKGEGA--LEDLVFVTGTG 1080
            ++T+L + G  + A+ V   A   GA+P S LDS +E DVS LP A+A++KVR+ LR +L+          A   EDLVFV GTG
Sbjct:    1 MVTALEEGGLREAADAVYADATARGALPDSVLDSDWEFDVSALPPAVARLKVRAVLRGVLAAARSXXXXXXAPAAEDLVFVCGTG 85
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLG9_ECTSI7.920e-20062.18PPR_long domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YR37_9STRA2.710e-643.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..103
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 349..465
coord: 514..692
coord: 845..1022
coord: 702..845
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 727..878
e-value: 2.3E-41
score: 144.1
coord: 879..1034
e-value: 1.6E-35
score: 125.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 575..717
e-value: 4.5E-29
score: 103.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 648..692
e-value: 1.1E-7
score: 31.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 924..956
e-value: 1.9E-5
score: 22.5
coord: 707..740
e-value: 3.8E-9
score: 34.1
coord: 886..915
e-value: 1.5E-4
score: 19.7
coord: 959..992
e-value: 0.001
score: 17.1
coord: 663..692
e-value: 6.2E-6
score: 24.1
coord: 780..811
e-value: 5.8E-6
score: 24.2
coord: 579..610
e-value: 1.1E-4
score: 20.1
coord: 742..776
e-value: 4.8E-5
score: 21.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 579..607
e-value: 0.0011
score: 19.0
coord: 514..535
e-value: 0.39
score: 11.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 704..752
e-value: 2.0E-14
score: 53.5
coord: 774..821
e-value: 9.8E-10
score: 38.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 845..875
score: 7.377
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 884..918
score: 10.72
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 956..990
score: 10.03
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 576..610
score: 10.819
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 409..443
score: 8.418
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 509..543
score: 5.93
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 810..840
score: 8.791
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 740..774
score: 10.753
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 991..1025
score: 9.35
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 336..370
score: 6.336
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 775..809
score: 10.874
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 705..739
score: 13.636
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 921..955
score: 11.29
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 661..695
score: 10.83
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 868..983
e-value: 4.2E-8
score: 32.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:409787..422157 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1015.1mRNA_P-fluviatile_contig11.1015.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig11 409757..422281 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig11.1015.1 ID=prot_P-fluviatile_contig11.1015.1|Name=mRNA_P-fluviatile_contig11.1015.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1245bp
MVTPAGGVGFGKGICVDVGTQRHVAFAVSGMAPAGGARVLSWPSPGARPA
TVRVLPRQPRGMTMFARPTADASASSRAEDARATRLEEARKLVRARRKEV
KDRKATVEAETASAAAAAAGPRGATHAGNIGSGAATEDSRSMRLMASSSI
SDVGDTATTRTKWLPRFRTQTSASASAMADSSSRYSSGSVTPGYSPRARS
GAVARGAKVTGARGARGGVKRRRVLPDFTEVVVAPPAPPDVGGGGGGALD
GRDNAALVAAIQATLDQTVAQLAAQEAPVRGALPSLPHGIPQEGWLRVVG
LIRRACRDEDDGGGGDGREGMAAKGAGEGGRPPPPPRIAFELALQVCVLC
QRPDAGLEVLDLMRSTGLQTDLKAYKTVLKDYPGNRKQGRALFTMQMMTA
VHAAGLVPDIDMLSSAMDACFKARDTEGAMHFMDQATRLGLEPDDSMFEE
AIIAFSLAGKWLEARDLAVQWRKQASAAAVAASGDAGSVDVGPTASDRRS
VSPPPAPPPPACNTALLKAMAKAGEVDEALGWLEETCNTAAAATAATGTA
AVGIAAADTAAAAPAEGSPVVPVGLDHSSFMAVLSACSKAGMWQSAISVL
GEMDRVGLVPETVAYNTVLAAFEHRPHPSEAGGIGAKREAPRWPVALKLL
ADMEMRGVAPDVVTYNSLINVLRRGGQREKALEIFEGMESKGGGENAVEG
AVRPDVITYNSVISTCASGGDWKKASQLIDEMRRKGLKPDRYTYTSAIHA
CGKAPNPGEALRLLRSMEANNVIPDVIAMTACMDALAAGGKWSEAITILD
EMRSKGIAPNERTYKAAIQACGRGGQWQRALELLSRLENRPSGATVQEYN
CAMQACVTGGEHGRALDLLEQMKANKGGVNAGPDIITFTSAIMACSSMGK
WDRALSLLDEMREAGPRTQPNVRSYTAAMAACGRARKWEEALALHSKLLE
EGLTPDQASFNAVIRAARRGGQHELSMKLLASMVEAGLTPDAVTVGELIT
SLSDRGRWDEAERVVRVAERTGAIPASSLDSSFEVDVSHLPAAIAKVKVR
STLRKILSVWEESSKGEGALEDLVFVTGTGSGTKLPTAAAAASPWDDDAD
GGTVIDLADGNTSSSGGGSSAAASAEPARADPAAASSLPAAGRVVGGTAA
ASARVTATALSMAGLGGWRAARYSDRSFSLGKMLAEHLRTSFEPPLKARP
GEAVAGCLVVKAEDLENGKDRQPTSDRRPCRRKKALRPQPPLQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR033443PPR_long