mRNA_P-fluviatile_contig11.1015.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1015.1 vs. uniprot
Match: D8LLG9_ECTSI (PPR_long domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLG9_ECTSI) HSP 1 Score: 622 bits (1605), Expect = 3.060e-199 Identity = 735/1182 (62.18%), Postives = 812/1182 (68.70%), Query Frame = 1
Query: 214 MTMFARPTADASASSRAEDARATRLEEARKLVRARRKEVKDRKATVEAETASXXXXXXXXXXXXXXXXXXXXXATEDSRSXXXXXXXXXXXXGDTATTRTKWLPRFRTQTSASASAMADSSSRY-SSGSVTP-------GYSPRARSGAVARGAKVTGARGARGGVKRRRVLPDFTEVVVXXXXXXXXXXXXXXALDGRDNAALVAAIQATLDQTVAQLAAQE----APVRGALPSLPHGIPQEGWLRVVGLIRRAC----RDEDXXXXXXXXXXXXXXXXXXXXXXXXXXRIAFELALQVCVLCQRPDAGLEVLDLMRSTGLQTDLKAYKTVLKDYPGNRKQGRALFTMQMMTAVHAAGLVPDIDMLSSAMDACFKARDTEGAMHFMDQATRLGLEPDDSMFEEAIIAFSLAGKWLEARDLAVQWRKQASAAAVAASGDAGSVDVGPTASDRRSVSPPXXXXXXACNTALLKAMAKAGEVDEALGWLEETCNTAAAAXXXXXXXXXXXXXXXXXXXXXXEGSPVVPVGLDHSSFMAVLSACSKAGMWQSAISVLGEMDRVGLVPETVAYNTVLAAFEHRPHP--SEAGGIGAKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXLINVLRRGGQREKALEIFEGMESKGGGENAVEGAVRXXXXXXXXXXXXXXXXXXXXXXXXXXXEMRRKGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKANKGGVNAGPDIITFTSXXXXXXXXXXXXXXXXXXXXMREAGPRTQXXXXXXXXXXXXXXXXXXXXXXXXXHSKLLEEGLTPDQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELITSLSDRGRWDEAERVVRVAERTGAIPASSLDSSFEVDVSHLPAAIAKVKVRSTLRKILSVWEESS---KGEGA----LEDLVFVTGTGSGTKLPTAAAAASPWDDDA--DGGTVIDLADGNTXXXXXXXXXXXXXEPARADXXXXXSLPAAGRVVGGTAAASARVTATALSMAGLGGWRAARYSDRSFSLGKMLAEHLRTSFEPPLKARPGEAVAGCLVVKAEDLE 3678
MTM A TAD + E+A +RLEEAR LVRARR+E K R+A XXXXXXXXXXXXXX T+ + +A+TR+ RT AS SSSR+ SSG+++ G PR R GA +RGA+ G +G GVKRRRVLPDFT+ A+ D+ LVAAI+ATLDQT AQLA ++ A G LPSL HG Q+GWLRV+GLIRRAC + XXXX R+AFELAL+VCVLC+RPDAGLEVL LMRSTGLQ DL YKTVLK Y NRKQG+ALFT+Q M+AV AGLV DI+MLS+AMDAC KARDTEGA+HFMDQA RLGL+PDD+MF EAI+A+SLAGKW+EARDLA+QWR QA + A PP CNTA+LKAM KAG+VDEA+ WL +T + A A +GS V LDHSSFMAVLSACSKAG W SA+SVL EMDR G+ PETVA+NTVLAAFEHR H S +GG AKRE LINVLR GGQR++ALEI +GM +KGG G XXXXXXXXXXXXXXXXXXXXXXXX EMRRKGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKANKGGVNAGPD++T XXXXXXXXXXXXXXXXXXXXMREAGPRTQXXXXXXXXXXXXXXXXXXXXXXXXX SKLLEEG++PD A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GELI+SLSDRGRWD+A+RVV +AE+TGAIPASSLDS FEVDVS LP AIAKVK R TL++IL VW ESS +G GA LEDLVFVTGTGS TK A A+PW D D G+ D D E ARA+ XXXS A GTAA+ A AG GGWR AR+SDRSF LG++L EHLRT+F PPLKA+P E VAGCLVVK EDLE
Sbjct: 1 MTMLASSTADEKSL---EEAHTSRLEEARMLVRARRQEAKARQAAXXXXXXXXXXXXXXXXXXXXXTAKDPAAPTKPT--------LPGSGVSSSASTRS------RTSNVDVASGGKKSSSRFRSSGAISSNSRGTRGGVYPRGRPGAESRGARGPGGKGF--GVKRRRVLPDFTKAT------KATAVPVLAAVGDGDDTGLVAAIRATLDQTRAQLAGRKPSTSAAAGGVLPSLTHGATQQGWLRVIGLIRRACGGTEESDRGSSGGPNGAAPGGVESSGVPPXXXXPRVAFELALEVCVLCERPDAGLEVLSLMRSTGLQADLDDYKTVLKGYSANRKQGKALFTVQTMSAVQQAGLVADIEMLSAAMDACSKARDTEGAVHFMDQAIRLGLKPDDTMFREAILAYSLAGKWVEARDLALQWRGQAPSPASXXXXXXXXXXXXXXXXXXSRPPPPTV-----CNTAILKAMGKAGKVDEAIAWLGDTYDAATATATAASGAGTTEDE---------QGSVRGFVCLDHSSFMAVLSACSKAGRWGSALSVLREMDRAGVTPETVAFNTVLAAFEHRAHSGGSSSGGGAAKREAPRWPMALELLADMERRGVEPDVVTYNSLINVLRWGGQRDRALEILDGMNAKGGA-----GXXXXXXXXXXXXXXXXXXXXXXXXXXXLIGEMRRKGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKANKGGVNAGPDMVTXXXXXXXXXXXXXXXXXXXXXXXMREAGPRTQXXXXXXXXXXXXXXXXXXXXXXXXXXSKLLEEGMSPDPASFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVGELISSLSDRGRWDDAQRVVEIAEKTGAIPASSLDSDFEVDVSQLPPAIAKVKARGTLQRILDVWRESSGNAEGGGATSSPLEDLVFVTGTGSATKPSPAPDTAAPWAGDVIDDDGSAGDGKDIVIDVTVSDDTSTTSTESARAEPTXXXS---ASVETMGTAASGAA--------AGRGGWRVARFSDRSFGLGRVLVEHLRTAFNPPLKAQPREFVAGCLVVKVEDLE 1127
BLAST of mRNA_P-fluviatile_contig11.1015.1 vs. uniprot
Match: A0A835YR37_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR37_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 2.850e-6 Identity = 37/85 (43.53%), Postives = 51/85 (60.00%), Query Frame = 1
Query: 3022 LITSLSDRGRWDEAERVVRVAERTGAIPASSLDSSFEVDVSHLPAAIAKVKVRSTLRKILSVWEESSKGEGA--LEDLVFVTGTG 3270
++T+L + G + A+ V A GA+P S LDS +E DVS LP A+A++KVR+ LR +L+ A EDLVFV GTG
Sbjct: 1 MVTALEEGGLREAADAVYADATARGALPDSVLDSDWEFDVSALPPAVARLKVRAVLRGVLAAARSXXXXXXAPAAEDLVFVCGTG 85 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1015.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1015.1 >prot_P-fluviatile_contig11.1015.1 ID=prot_P-fluviatile_contig11.1015.1|Name=mRNA_P-fluviatile_contig11.1015.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1245bp MVTPAGGVGFGKGICVDVGTQRHVAFAVSGMAPAGGARVLSWPSPGARPAback to top mRNA from alignment at P-fluviatile_contig11:409757..422281+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1015.1 ID=mRNA_P-fluviatile_contig11.1015.1|Name=mRNA_P-fluviatile_contig11.1015.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=12525bp|location=Sequence derived from alignment at P-fluviatile_contig11:409757..422281+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:409757..422281+ >mRNA_P-fluviatile_contig11.1015.1 ID=mRNA_P-fluviatile_contig11.1015.1|Name=mRNA_P-fluviatile_contig11.1015.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=7470bp|location=Sequence derived from alignment at P-fluviatile_contig11:409757..422281+ (Porterinema fluviatile SAG_2381)back to top |